Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 19 665 NP_001263689 19 665 NP_001119584 19 665 NP_001119586 19 665 NP_001263625 19 665 NP_001119590 19 665 NP_001263690 19 665 NP_001119585 19 665 NP_001263624 19 665 NP_001119588 19 665 NP_001119587 19 665 NP_001119589 19 665 NP_001263627 19 665 NP_001263628 19 665 NP_001263626 19 665 NP_060877 17 2528 NP_001019820 17 3301 NP_001737 17 3301 NP_001010892 17 3301 NP_001155136 17 3301 XP_006715532 17 3301 NP_001191121 17 4312 NP_001119713 17 4312 NP_001191117 17 4312 NP_001119712 17 4312 NP_001119714 17 4312 NP_005418 17 4312 NP_001191116 17 4312 NP_001191115 17 4312 NP_001191119 17 4312 NP_001191113 17 4312 NP_001191118 17 4312 NP_001191120 17 4312 NP_001191114 17 4312 NP_689412 17 4312 NP_689410 17 4312 NP_006231 17 4312 XP_006724563 17 4312 XP_005274611 17 4312 XP_005274610 17 4312 NP_001258142 16 5631 NP_067022 16 5631 XP_006710446 16 5631 NP_001229856 16 7355 NP_001229853 16 7355 NP_067011 16 7355 NP_001229857 16 7355 NP_001229855 16 7355 NP_758872 16 7355 NP_005291 16 7355 NP_000909 16 7355 NP_002229 16 7355 NP_602297 16 7355 NP_001257608 16 7355 XP_005272654 16 7355 XP_005254211 16 7355 XP_005254210 16 7355 XP_006720446 16 7355 XP_005254209 16 7355 XP_005254208 16 7355 NP_003983 16 7355 NP_001123500 16 7355 NP_001091048 16 7355 NP_001104026 15 9605 NP_001447 15 9605 NP_705932 15 9605 NP_705934 15 9605 NP_705933 15 9605 NP_001165599 15 9605 NP_757366 15 9605 NP_004648 15 9605 XP_005254400 15 9605 XP_005254399 15 9605 XP_005267398 15 9605 NP_056246 15 9605>NP_000537 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 266 GRNSFEVRV 274>NP_001263689 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 227 GRNSFEVRV 235>NP_001119584 Length = 393 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 266 GRNSFEVRV 274>NP_001119586 Length = 341 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 266 GRNSFEVRV 274>NP_001263625 Length = 302 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 227 GRNSFEVRV 235>NP_001119590 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 227 GRNSFEVRV 235>NP_001263690 Length = 354 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 227 GRNSFEVRV 235>NP_001119585 Length = 346 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 266 GRNSFEVRV 274>NP_001263624 Length = 307 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 227 GRNSFEVRV 235>NP_001119588 Length = 209 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 134 GRNSFEVRV 142>NP_001119587 Length = 261 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 134 GRNSFEVRV 142>NP_001119589 Length = 214 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 134 GRNSFEVRV 142>NP_001263627 Length = 182 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 107 GRNSFEVRV 115>NP_001263628 Length = 187 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 107 GRNSFEVRV 115>NP_001263626 Length = 234 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNSFEV V Sbjct: 107 GRNSFEVRV 115>NP_060877 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GRNS +VLV Sbjct: 276 GRNSSDVLV 284>NP_001019820 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NSFEVLV 9 NSFE+LV Sbjct: 246 NSFEILV 252>NP_001737 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NSFEVLV 9 NSFE+LV Sbjct: 246 NSFEILV 252>NP_001010892 Length = 716 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSFE Sbjct: 519 GRNSFE 524>NP_001155136 Length = 600 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSFE Sbjct: 519 GRNSFE 524>XP_006715532 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSFE Sbjct: 519 GRNSFE 524>NP_001191121 Length = 565 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 290 GRENFEILM 298>NP_001119713 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 312 GRENFEILM 320>NP_001191117 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 361 GRENFEILM 369>NP_001119712 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 312 GRENFEILM 320>NP_001119714 Length = 426 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 312 GRENFEILM 320>NP_005418 Length = 636 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 361 GRENFEILM 369>NP_001191116 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 361 GRENFEILM 369>NP_001191115 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 361 GRENFEILM 369>NP_001191119 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 312 GRENFEILM 320>NP_001191113 Length = 499 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 361 GRENFEILM 369>NP_001191118 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 312 GRENFEILM 320>NP_001191120 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 312 GRENFEILM 320>NP_001191114 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR +FE+L+ Sbjct: 361 GRENFEILM 369>NP_689412 Length = 591 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 G+NS E+L+ Sbjct: 206 GKNSIEILM 214>NP_689410 Length = 625 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 G+NS E+L+ Sbjct: 206 GKNSIEILM 214>NP_006231 Length = 653 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 G+NS E+L+ Sbjct: 206 GKNSIEILM 214>XP_006724563 Length = 563 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 G+NS E+L+ Sbjct: 116 GKNSIEILM 124>XP_005274611 Length = 588 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 G+NS E+L+ Sbjct: 141 GKNSIEILM 149>XP_005274610 Length = 653 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 G+NS E+L+ Sbjct: 206 GKNSIEILM 214>NP_001258142 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 RN +EVLV Sbjct: 41 RNHYEVLV 48>NP_067022 Length = 450 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 RN +EVLV Sbjct: 41 RNHYEVLV 48>XP_006710446 Length = 1239 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRNSFEV 7 G+NSF+V Sbjct: 6 GKNSFQV 12>NP_001229856 Length = 405 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR S+EV V Sbjct: 377 GRQSYEVSV 385>NP_001229853 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR S+EV V Sbjct: 467 GRQSYEVSV 475>NP_067011 Length = 478 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR S+EV V Sbjct: 450 GRQSYEVSV 458>NP_001229857 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR S+EV V Sbjct: 254 GRQSYEVSV 262>NP_001229855 Length = 431 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR S+EV V Sbjct: 403 GRQSYEVSV 411>NP_758872 Length = 989 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSFEVLV 9 NSFE+L+ Sbjct: 93 NSFEILM 99>NP_005291 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 RNSF VL+ Sbjct: 266 RNSFIVLI 273>NP_000909 Length = 508 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRN+FE Sbjct: 212 GRNNFE 217>NP_002229 Length = 962 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSFEVLV 9 NSFE+L+ Sbjct: 93 NSFEILM 99>NP_602297 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSF+ Sbjct: 196 GRNSFQ 201>NP_001257608 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N FE+L Sbjct: 174 GQNGFELL 181>XP_005272654 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 RNSF VL+ Sbjct: 266 RNSFIVLI 273>XP_005254211 Length = 269 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 19 GKNTFEFL 26>XP_005254210 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 240 GKNTFEFL 247>XP_006720446 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 254 GKNTFEFL 261>XP_005254209 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 254 GKNTFEFL 261>XP_005254208 Length = 652 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 402 GKNTFEFL 409>NP_003983 Length = 490 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 240 GKNTFEFL 247>NP_001123500 Length = 638 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRNSFEVL 8 G+N+FE L Sbjct: 388 GKNTFEFL 395>NP_001091048 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 RNSF VL+ Sbjct: 266 RNSFIVLI 273>NP_001104026 Length = 2647 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR+ FEV V Sbjct: 562 GRSPFEVKV 570>NP_001447 Length = 2639 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 GR+ FEV V Sbjct: 562 GRSPFEVKV 570>NP_705932 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 G N F++LV Sbjct: 524 GSNVFDILV 532>NP_705934 Length = 558 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 G N F++LV Sbjct: 460 GSNVFDILV 468>NP_705933 Length = 603 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 G N F++LV Sbjct: 505 GSNVFDILV 513>NP_001165599 Length = 1331 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 + SFE+LV Sbjct: 582 KKSFEILV 589>NP_757366 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 + SFE+LV Sbjct: 582 KKSFEILV 589>NP_004648 Length = 425 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 RN F+VL+ Sbjct: 152 RNHFKVLI 159>XP_005254400 Length = 1378 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 + SFE+LV Sbjct: 629 KKSFEILV 636>XP_005254399 Length = 1379 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 RNSFEVLV 9 + SFE+LV Sbjct: 629 KKSFEILV 636>XP_005267398 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GRNSFEVLV 9 G N F++LV Sbjct: 524 GSNVFDILV 532>NP_056246 Length = 486 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRNSFEVLV 9 GR+ +EVLV Sbjct: 344 GRHYWEVLV 352Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.142 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 510,633 Number of extensions: 1044 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |