Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000537 21 229 NP_001263689 21 229 NP_001119584 21 229 NP_001119586 21 229 NP_001263625 21 229 NP_001119590 21 229 NP_001263690 21 229 NP_001119585 21 229 NP_001263624 21 229 NP_001119588 21 229 NP_001119587 21 229 NP_001119589 21 229 NP_001263627 21 229 NP_001263628 21 229 NP_001263626 21 229 NP_001010892 17 3301 NP_001155136 17 3301 XP_006715532 17 3301 NP_542784 17 3301 NP_001191121 17 4312 NP_001119713 17 4312 NP_001191117 17 4312 NP_001119712 17 4312 NP_001119714 17 4312 NP_005418 17 4312 NP_001191116 17 4312 NP_001191115 17 4312 NP_001191119 17 4312 NP_001191113 17 4312 NP_001191118 17 4312 NP_001191120 17 4312 NP_001191114 17 4312 NP_775297 16 5631 NP_000909 16 5631 XP_005276483 16 5631 XP_005254073 16 5631 XP_005275784 16 5631 NP_001104026 16 7355 NP_001447 16 7355 NP_602297 16 7355 XP_006715049 16 7355 XP_006715048 16 7355 XP_006715047 16 7355 NP_008989 16 7355 NP_877963 15 9605 NP_002651 15 9605 NP_775113 15 9605 NP_689846 15 9605 NP_077320 15 9605 NP_001018123 15 9605 NP_775111 15 9605 NP_775110 15 9605 NP_775112 15 9605 NP_000061 15 9605 NP_001739 15 9605 NP_001139540 15 9605 NP_061748 15 9605 NP_115270 15 9605 XP_005260495 15 9605 XP_006716564 15 9605 XP_005250826 15 9605 XP_005264988 15 9605 XP_005264986 15 9605 XP_005264985 15 9605 XP_006713076 15 9605 NP_001106 15 9605 NP_115269 15 9605 NP_003727 15 9605>NP_000537 Length = 393 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 266 GRNSFEVRV 274>NP_001263689 Length = 354 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 227 GRNSFEVRV 235>NP_001119584 Length = 393 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 266 GRNSFEVRV 274>NP_001119586 Length = 341 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 266 GRNSFEVRV 274>NP_001263625 Length = 302 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 227 GRNSFEVRV 235>NP_001119590 Length = 354 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 227 GRNSFEVRV 235>NP_001263690 Length = 354 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 227 GRNSFEVRV 235>NP_001119585 Length = 346 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 266 GRNSFEVRV 274>NP_001263624 Length = 307 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 227 GRNSFEVRV 235>NP_001119588 Length = 209 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 134 GRNSFEVRV 142>NP_001119587 Length = 261 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 134 GRNSFEVRV 142>NP_001119589 Length = 214 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 134 GRNSFEVRV 142>NP_001263627 Length = 182 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 107 GRNSFEVRV 115>NP_001263628 Length = 187 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 107 GRNSFEVRV 115>NP_001263626 Length = 234 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GRNSFEMRV 9 GRNSFE+RV Sbjct: 107 GRNSFEVRV 115>NP_001010892 Length = 716 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSFE Sbjct: 519 GRNSFE 524>NP_001155136 Length = 600 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSFE Sbjct: 519 GRNSFE 524>XP_006715532 Length = 632 Score = 16.9 bits (32), Expect = 3301 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSFE Sbjct: 519 GRNSFE 524>NP_542784 Length = 214 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR+ F MRV Sbjct: 81 GRDGFHMRV 89>NP_001191121 Length = 565 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 215 GRRSFEGRI 223>NP_001119713 Length = 450 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 237 GRRSFEGRI 245>NP_001191117 Length = 540 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 286 GRRSFEGRI 294>NP_001119712 Length = 587 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 237 GRRSFEGRI 245>NP_001119714 Length = 426 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 237 GRRSFEGRI 245>NP_005418 Length = 636 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 286 GRRSFEGRI 294>NP_001191116 Length = 555 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 286 GRRSFEGRI 294>NP_001191115 Length = 403 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 286 GRRSFEGRI 294>NP_001191119 Length = 506 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 237 GRRSFEGRI 245>NP_001191113 Length = 499 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 286 GRRSFEGRI 294>NP_001191118 Length = 354 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 237 GRRSFEGRI 245>NP_001191120 Length = 491 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 237 GRRSFEGRI 245>NP_001191114 Length = 475 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR SFE R+ Sbjct: 286 GRRSFEGRI 294>NP_775297 Length = 192 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEMRV 9 G+NSF+ R+ Sbjct: 13 GKNSFKKRL 21>NP_000909 Length = 508 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GRN+FE V Sbjct: 212 GRNNFEGEV 220>XP_005276483 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR S E+RV Sbjct: 123 GRGSHELRV 131>XP_005254073 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR S E+RV Sbjct: 123 GRGSHELRV 131>XP_005275784 Length = 198 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GRNSFEMRV 9 GR S E+RV Sbjct: 123 GRGSHELRV 131>NP_001104026 Length = 2647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEMRV 9 GR+ FE++V Sbjct: 562 GRSPFEVKV 570>NP_001447 Length = 2639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GRNSFEMRV 9 GR+ FE++V Sbjct: 562 GRSPFEVKV 570>NP_602297 Length = 224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GRNSFE 6 GRNSF+ Sbjct: 196 GRNSFQ 201>XP_006715049 Length = 715 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 NS+EMR+ Sbjct: 637 NSYEMRL 643>XP_006715048 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 NS+EMR+ Sbjct: 662 NSYEMRL 668>XP_006715047 Length = 740 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 NS+EMR+ Sbjct: 662 NSYEMRL 668>NP_008989 Length = 739 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 NS+EMR+ Sbjct: 661 NSYEMRL 667>NP_877963 Length = 1290 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NSFEMRV 9 N FEMR+ Sbjct: 647 NEFEMRL 653>NP_002651 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NSFEMRV 9 N FEMR+ Sbjct: 647 NEFEMRL 653>NP_775113 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 78 NSYEMR 83>NP_689846 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NSFEMRV 9 N FEMR+ Sbjct: 116 NKFEMRL 122>NP_077320 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 737 NSYEMR 742>NP_001018123 Length = 859 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NSFEMRV 9 N FEMR+ Sbjct: 116 NKFEMRL 122>NP_775111 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 231 NSYEMR 236>NP_775110 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 651 NSYEMR 656>NP_775112 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 78 NSYEMR 83>NP_000061 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 743 NSYEMR 748>NP_001739 Length = 700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 623 NSYEMR 628>NP_001139540 Length = 622 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 NSFEMR 8 NS+EMR Sbjct: 545 NSYEMR 550>NP_061748 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RNSFEMRV 9 +NSFE+++ Sbjct: 135 QNSFELQI 142>NP_115270 Length = 818 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RNSFEMRV 9 +NSFE+++ Sbjct: 135 QNSFELQI 142>XP_005260495 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NSFEMRV 9 N FEMR+ Sbjct: 647 NEFEMRL 653>XP_006716564 Length = 1185 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 N+FE+R+ Sbjct: 1017 NNFELRI 1023>XP_005250826 Length = 1221 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 N+FE+R+ Sbjct: 1053 NNFELRI 1059>XP_005264988 Length = 746 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNSFEM 7 RN+FEM Sbjct: 592 RNNFEM 597>XP_005264986 Length = 801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNSFEM 7 RN+FEM Sbjct: 579 RNNFEM 584>XP_005264985 Length = 813 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNSFEM 7 RN+FEM Sbjct: 591 RNNFEM 596>XP_006713076 Length = 814 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 RNSFEM 7 RN+FEM Sbjct: 592 RNNFEM 597>NP_001106 Length = 1251 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 3 NSFEMRV 9 N+FE+R+ Sbjct: 1083 NNFELRI 1089>NP_115269 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RNSFEMRV 9 +NSFE+++ Sbjct: 135 QNSFELQI 142>NP_003727 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 RNSFEMRV 9 +NSFE+++ Sbjct: 135 QNSFELQI 142Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.137 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 487,146 Number of extensions: 983 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |