Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 20 509 NP_055192 18 1482 NP_001123359 18 1482 NP_694985 17 2528 NP_006738 17 2528 XP_005274246 17 2528 NP_004504 17 4312 NP_001165599 17 4312 NP_757366 17 4312 XP_005254403 17 4312 XP_005254402 17 4312 XP_005254401 17 4312 XP_005254400 17 4312 XP_005254399 17 4312 NP_736610 16 5631 NP_938072 16 5631 XP_006719367 16 5631 XP_006719366 16 5631 XP_006719365 16 5631 NP_056134 16 5631 NP_004509 16 7355 NP_742106 16 7355 NP_742105 16 7355 NP_742104 16 7355 NP_060380 16 7355 XP_006723855 16 7355 XP_006723854 16 7355 XP_006723853 16 7355 XP_006723852 16 7355 XP_006723851 16 7355 XP_006723850 16 7355 XP_005264451 16 7355 XP_006712100 16 7355 XP_005264450 16 7355 NP_001070650 15 9605 NP_036550 15 9605 NP_006178 15 9605 NP_001099001 15 9605 NP_065870 15 9605 NP_001156001 15 9605 XP_005257253 15 9605 XP_005257252 15 9605 XP_005253946 15 9605 XP_006715718 15 9605 XP_005248808 15 9605 XP_005248807 15 9605 XP_005248806 15 9605 XP_005248805 15 9605 XP_005248804 15 9605 XP_005248803 15 9605 XP_005248802 15 9605 XP_005248801 15 9605 XP_005248800 15 9605>NP_003290 Length = 803 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GRGTAITLV 9 GRGT ITLV Sbjct: 242 GRGTTITLV 250>NP_055192 Length = 621 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GRGTAIT 7 GRGTAIT Sbjct: 10 GRGTAIT 16>NP_001123359 Length = 568 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GRGTAIT 7 GRGTAIT Sbjct: 10 GRGTAIT 16>NP_694985 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 GRG AITL Sbjct: 652 GRGEAITL 659>NP_006738 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 GRG AITL Sbjct: 652 GRGEAITL 659>XP_005274246 Length = 1042 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 GRG AITL Sbjct: 652 GRGEAITL 659>NP_004504 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 187 GRGAAPTLV 195>NP_001165599 Length = 1331 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 888 GRGAAPTLV 896>NP_757366 Length = 1332 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 888 GRGAAPTLV 896>XP_005254403 Length = 631 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 187 GRGAAPTLV 195>XP_005254402 Length = 721 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 278 GRGAAPTLV 286>XP_005254401 Length = 722 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 278 GRGAAPTLV 286>XP_005254400 Length = 1378 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 935 GRGAAPTLV 943>XP_005254399 Length = 1379 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRG A TLV Sbjct: 935 GRGAAPTLV 943>NP_736610 Length = 1409 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRGT TLV Sbjct: 373 GRGTDRTLV 381>NP_938072 Length = 1285 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRGT TLV Sbjct: 249 GRGTDRTLV 257>XP_006719367 Length = 881 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRGT TLV Sbjct: 383 GRGTDRTLV 391>XP_006719366 Length = 1418 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRGT TLV Sbjct: 373 GRGTDRTLV 381>XP_006719365 Length = 1428 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRGT TLV Sbjct: 383 GRGTDRTLV 391>NP_056134 Length = 1419 Score = 16.2 bits (30), Expect = 5631 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GRGTAITLV 9 GRGT TLV Sbjct: 383 GRGTDRTLV 391>NP_004509 Length = 844 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 566 GRGPAIT 572>NP_742106 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 563 GRGPAIT 569>NP_742105 Length = 872 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 594 GRGPAIT 600>NP_742104 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 576 GRGPAIT 582>NP_060380 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGTAIT 7 RGTAIT Sbjct: 225 RGTAIT 230>XP_006723855 Length = 856 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 578 GRGPAIT 584>XP_006723854 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 580 GRGPAIT 586>XP_006723853 Length = 868 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 590 GRGPAIT 596>XP_006723852 Length = 876 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 598 GRGPAIT 604>XP_006723851 Length = 885 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 607 GRGPAIT 613>XP_006723850 Length = 886 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 GRG AIT Sbjct: 608 GRGPAIT 614>XP_005264451 Length = 240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGTAIT 7 RGTAIT Sbjct: 225 RGTAIT 230>XP_006712100 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGTAIT 7 RGTAIT Sbjct: 225 RGTAIT 230>XP_005264450 Length = 468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RGTAIT 7 RGTAIT Sbjct: 225 RGTAIT 230>NP_001070650 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 G+GTA+ L Sbjct: 53 GQGTAVLL 60>NP_036550 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 G+GTA+ L Sbjct: 53 GQGTAVLL 60>NP_006178 Length = 1087 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GRGTAI 6 GRGTA+ Sbjct: 64 GRGTAL 69>NP_001099001 Length = 1319 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 766 GTAITL 771>NP_065870 Length = 1302 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 749 GTAITL 754>NP_001156001 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 962 GTAITL 967>XP_005257253 Length = 492 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 G+GTA+ L Sbjct: 53 GQGTAVLL 60>XP_005257252 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GRGTAITL 8 G+GTA+ L Sbjct: 53 GQGTAVLL 60>XP_005253946 Length = 1089 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GRGTAI 6 GRGTA+ Sbjct: 64 GRGTAL 69>XP_006715718 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GRGTAIT 7 G GTA+T Sbjct: 181 GHGTALT 187>XP_005248808 Length = 1121 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 568 GTAITL 573>XP_005248807 Length = 1182 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 629 GTAITL 634>XP_005248806 Length = 1317 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 764 GTAITL 769>XP_005248805 Length = 1345 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 792 GTAITL 797>XP_005248804 Length = 1378 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 825 GTAITL 830>XP_005248803 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 902 GTAITL 907>XP_005248802 Length = 1515 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 962 GTAITL 967>XP_005248801 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 988 GTAITL 993>XP_005248800 Length = 1541 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 GTAITL 8 GTAITL Sbjct: 988 GTAITL 993Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.142 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 508,942 Number of extensions: 769 Number of successful extensions: 53 Number of sequences better than 10000.0: 53 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |