Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001185761 19 869 NP_001185763 19 869 NP_055459 19 869 NP_001002811 19 869 NP_001002812 19 869 XP_006711719 19 869 XP_006711717 19 869 XP_006711716 19 869 XP_006711715 19 869 XP_006711714 19 869 XP_006711713 19 869 XP_006711712 19 869 XP_006711711 19 869 XP_006711710 19 869 XP_006711709 19 869 XP_005277503 19 869 XP_005273038 19 869 XP_006711708 19 869 XP_005277500 19 869 XP_006711707 19 869 XP_005277499 19 869 XP_006711706 19 869 XP_006711705 19 869 NP_003449 17 4312 NP_001070142 17 4312 XP_005257707 17 4312 XP_006713443 17 4312 NP_803190 17 4312 NP_077012 17 4312 NP_055778 16 7355 NP_001093592 16 7355 NP_036569 16 7355 XP_006726410 16 7355 XP_005259577 16 7355 XP_005259576 16 7355 XP_006711164 16 7355 NP_001124438 15 9605 NP_001159725 15 9605 NP_001052 15 9605 NP_112246 15 9605 NP_036456 15 9605>NP_001185761 Length = 2240 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 836 RESQMELS 843>NP_001185763 Length = 2362 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 770 RESQMELS 777>NP_055459 Length = 2346 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 770 RESQMELS 777>NP_001002811 Length = 1132 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>NP_001002812 Length = 969 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 770 RESQMELS 777>XP_006711719 Length = 2302 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 836 RESQMELS 843>XP_006711717 Length = 2385 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 836 RESQMELS 843>XP_006711716 Length = 2411 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 836 RESQMELS 843>XP_006711715 Length = 2428 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 770 RESQMELS 777>XP_006711714 Length = 2429 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 770 RESQMELS 777>XP_006711713 Length = 2432 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 773 RESQMELS 780>XP_006711712 Length = 2473 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_006711711 Length = 2482 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_006711710 Length = 2494 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 836 RESQMELS 843>XP_006711709 Length = 2495 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 836 RESQMELS 843>XP_005277503 Length = 2498 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_005273038 Length = 2509 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_006711708 Length = 2512 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_005277500 Length = 2525 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_006711707 Length = 2553 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_005277499 Length = 2561 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_006711706 Length = 2591 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>XP_006711705 Length = 2592 Score = 18.9 bits (37), Expect = 869 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 RESQMELS 9 RESQMELS Sbjct: 933 RESQMELS 940>NP_003449 Length = 3926 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRESQMELS 9 GR+S M+LS Sbjct: 2009 GRDSAMDLS 2017>NP_001070142 Length = 321 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GRESQMEL 8 G+ESQM+L Sbjct: 206 GQESQMKL 213>XP_005257707 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GRESQMEL 8 G+ESQM+L Sbjct: 186 GQESQMKL 193>XP_006713443 Length = 3970 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GRESQMELS 9 GR+S M+LS Sbjct: 2053 GRDSAMDLS 2061>NP_803190 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GRESQMEL 8 G+ESQM+L Sbjct: 186 GQESQMKL 193>NP_077012 Length = 301 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GRESQMEL 8 G+ESQM+L Sbjct: 186 GQESQMKL 193>NP_055778 Length = 1366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRESQME 7 GR+SQ+E Sbjct: 1099 GRQSQLE 1105>NP_001093592 Length = 1309 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRESQME 7 GR+SQ+E Sbjct: 1042 GRQSQLE 1048>NP_036569 Length = 136 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 RESQMEL 8 RESQ+EL Sbjct: 48 RESQVEL 54>XP_006726410 Length = 2087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RESQME 7 RESQME Sbjct: 845 RESQME 850>XP_005259577 Length = 1366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRESQME 7 GR+SQ+E Sbjct: 1099 GRQSQLE 1105>XP_005259576 Length = 1366 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GRESQME 7 GR+SQ+E Sbjct: 1099 GRQSQLE 1105>XP_006711164 Length = 2087 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 RESQME 7 RESQME Sbjct: 845 RESQME 850>NP_001124438 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ESQMEL 8 ESQMEL Sbjct: 66 ESQMEL 71>NP_001159725 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ESQMEL 8 ESQMEL Sbjct: 66 ESQMEL 71>NP_001052 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ESQMEL 8 ESQMEL Sbjct: 66 ESQMEL 71>NP_112246 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 ESQMEL 8 ESQMEL Sbjct: 66 ESQMEL 71>NP_036456 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GRESQMELS 9 GR S ELS Sbjct: 242 GRRSSQELS 250Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.115 0.270 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 458,016 Number of extensions: 899 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |