Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001245200 19 665 NP_000240 19 665 NP_001161089 19 665 NP_001099043 18 1482 NP_006434 17 2528 NP_954653 17 2528 NP_076986 17 2528 XP_006718377 17 2528 XP_006718376 17 2528 XP_005253188 17 2528 NP_078925 17 4312 NP_009187 17 4312 NP_002069 17 4312 NP_005984 17 4312 NP_001166184 17 4312 XP_006722353 17 4312 XP_005256453 17 4312 XP_006718490 17 4312 XP_005265132 17 4312 XP_005265131 17 4312 XP_006713173 17 4312 XP_005265130 17 4312 XP_005265129 17 4312 XP_005265128 17 4312 XP_005265127 17 4312 XP_005265126 17 4312 NP_001138684 17 4312 NP_001138683 17 4312 NP_056441 16 5631 NP_005860 16 5631 NP_065394 16 7355 NP_653303 16 7355 NP_065871 16 7355 NP_940876 16 7355 XP_005276745 16 7355 XP_006724409 16 7355 XP_005261851 16 7355 XP_005261850 16 7355 XP_005260689 16 7355 XP_005260528 16 7355 XP_005252935 16 7355 XP_006711253 16 7355 XP_006711252 16 7355 XP_006711251 16 7355 XP_005244985 16 7355 XP_006711248 16 7355 XP_005244983 16 7355 XP_005270777 16 7355 XP_006710615 16 7355 XP_005270776 16 7355 XP_005275950 16 7355 NP_694991 16 7355 NP_001138678 16 7355 NP_852091 15 9605 NP_001138593 15 9605 NP_001273270 15 9605 NP_689932 15 9605 NP_001273359 15 9605 NP_620147 15 9605 NP_001273271 15 9605 XP_005261857 15 9605 XP_005261856 15 9605 XP_006724410 15 9605 XP_005261855 15 9605 XP_005261854 15 9605 XP_006719837 15 9605 XP_006710958 15 9605 NP_004601 15 9605>NP_001245200 Length = 687 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GREDKTLAF 9 G EDKTLAF Sbjct: 232 GCEDKTLAF 240>NP_000240 Length = 756 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GREDKTLAF 9 G EDKTLAF Sbjct: 232 GCEDKTLAF 240>NP_001161089 Length = 658 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GREDKTLAF 9 G EDKTLAF Sbjct: 134 GCEDKTLAF 142>NP_001099043 Length = 286 Score = 18.1 bits (35), Expect = 1482 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 EDKTLAF Sbjct: 237 EDKTLAF 243>NP_006434 Length = 174 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GREDKTL 7 GRED+TL Sbjct: 32 GREDRTL 38>NP_954653 Length = 148 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GREDKTL 7 GRED+TL Sbjct: 32 GREDRTL 38>NP_076986 Length = 226 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 EDKT+AF Sbjct: 86 EDKTIAF 92>XP_006718377 Length = 226 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 EDKT+AF Sbjct: 86 EDKTIAF 92>XP_006718376 Length = 288 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 EDKT+AF Sbjct: 224 EDKTIAF 230>XP_005253188 Length = 364 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 EDKT+AF Sbjct: 224 EDKTIAF 230>NP_078925 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GREDKTL 7 GRED TL Sbjct: 382 GREDNTL 388>NP_009187 Length = 709 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 +EDKTLA Sbjct: 592 KEDKTLA 598>NP_002069 Length = 2230 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2188 GRETKTMA 2195>NP_005984 Length = 1192 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 ED+TLAF Sbjct: 17 EDETLAF 23>NP_001166184 Length = 2243 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2203 GRETKTMA 2210>XP_006722353 Length = 1165 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 ED+TLAF Sbjct: 17 EDETLAF 23>XP_005256453 Length = 1175 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EDKTLAF 9 ED+TLAF Sbjct: 17 EDETLAF 23>XP_006718490 Length = 635 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 +EDKTLA Sbjct: 592 KEDKTLA 598>XP_005265132 Length = 2214 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2172 GRETKTMA 2179>XP_005265131 Length = 2245 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2203 GRETKTMA 2210>XP_006713173 Length = 2250 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2208 GRETKTMA 2215>XP_005265130 Length = 2252 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2210 GRETKTMA 2217>XP_005265129 Length = 2269 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2227 GRETKTMA 2234>XP_005265128 Length = 2278 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2236 GRETKTMA 2243>XP_005265127 Length = 2283 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2243 GRETKTMA 2250>XP_005265126 Length = 2285 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GREDKTLA 8 GRE KT+A Sbjct: 2243 GRETKTMA 2250>NP_001138684 Length = 565 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 +EDKTLA Sbjct: 448 KEDKTLA 454>NP_001138683 Length = 687 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 +EDKTLA Sbjct: 570 KEDKTLA 576>NP_056441 Length = 421 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GREDKTLAF 9 GRE+ T+AF Sbjct: 34 GRENWTVAF 42>NP_005860 Length = 472 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 RED+TLA Sbjct: 381 REDQTLA 387>NP_065394 Length = 580 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RE+ T+AF Sbjct: 94 REENTIAF 101>NP_653303 Length = 559 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 550 REDEAMAF 557>NP_065871 Length = 1659 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GREDKTLAF 9 G+ED+ L+F Sbjct: 1058 GQEDRGLSF 1066>NP_940876 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EDKTLA 8 EDKTLA Sbjct: 115 EDKTLA 120>XP_005276745 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GREDKTL 7 G+ED+TL Sbjct: 135 GKEDETL 141>XP_006724409 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REDKTLA 8 RED TLA Sbjct: 445 REDSTLA 451>XP_005261851 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REDKTLA 8 RED TLA Sbjct: 445 REDSTLA 451>XP_005261850 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REDKTLA 8 RED TLA Sbjct: 445 REDSTLA 451>XP_005260689 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GREDKTL 7 G+ED+TL Sbjct: 135 GKEDETL 141>XP_005260528 Length = 956 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GREDKTLAF 9 G+ED+ L+F Sbjct: 355 GQEDRGLSF 363>XP_005252935 Length = 402 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 EDKTLA 8 EDKTLA Sbjct: 115 EDKTLA 120>XP_006711253 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 336 REDEAMAF 343>XP_006711252 Length = 345 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 336 REDEAMAF 343>XP_006711251 Length = 466 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 457 REDEAMAF 464>XP_005244985 Length = 481 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 472 REDEAMAF 479>XP_006711248 Length = 533 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 524 REDEAMAF 531>XP_005244983 Length = 560 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 RED+ +AF Sbjct: 551 REDEAMAF 558>XP_005270777 Length = 453 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 +ED T+AF Sbjct: 94 KEDNTVAF 101>XP_006710615 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 +ED T+AF Sbjct: 66 KEDNTVAF 73>XP_005270776 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 +ED T+AF Sbjct: 66 KEDNTVAF 73>XP_005275950 Length = 271 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GREDKTL 7 G+ED+TL Sbjct: 135 GKEDETL 141>NP_694991 Length = 566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 REDKTLAF 9 +ED T+AF Sbjct: 94 KEDNTVAF 101>NP_001138678 Length = 1806 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 REDKTLA 8 RED TLA Sbjct: 445 REDSTLA 451>NP_852091 Length = 941 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GREDKTLAF 9 G E+KT A+ Sbjct: 654 GEEEKTQAY 662>NP_001138593 Length = 353 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GREDKTLA 8 GRE TLA Sbjct: 114 GRESHTLA 121>NP_001273270 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GREDKTL 7 G+ED TL Sbjct: 214 GKEDSTL 220>NP_689932 Length = 448 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GREDKTL 7 G+ED TL Sbjct: 241 GKEDSTL 247>NP_001273359 Length = 606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GREDKT 6 GREDK+ Sbjct: 146 GREDKS 151>NP_620147 Length = 666 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GREDKT 6 GREDK+ Sbjct: 146 GREDKS 151>NP_001273271 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GREDKTL 7 G+ED TL Sbjct: 205 GKEDSTL 211>XP_005261857 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 R+DKTL+ Sbjct: 8 RQDKTLS 14>XP_005261856 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 R+DKTL+ Sbjct: 292 RQDKTLS 298>XP_006724410 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 R+DKTL+ Sbjct: 292 RQDKTLS 298>XP_005261855 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 R+DKTL+ Sbjct: 292 RQDKTLS 298>XP_005261854 Length = 694 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 REDKTLA 8 R+DKTL+ Sbjct: 292 RQDKTLS 298>XP_006719837 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GREDKTL 7 G+ED TL Sbjct: 205 GKEDSTL 211>XP_006710958 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GREDKT 6 GREDK+ Sbjct: 20 GREDKS 25>NP_004601 Length = 326 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GREDKTLA 8 GRE TLA Sbjct: 87 GRESHTLA 94Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.139 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 604,098 Number of extensions: 978 Number of successful extensions: 68 Number of sequences better than 10000.0: 68 Number of HSP's gapped: 68 Number of HSP's successfully gapped: 68 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |