Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_004963                                                              18    1135
XP_005251512                                                           18    1135
NP_003310                                                              18    1935
NP_597676                                                              18    1935
NP_001243779                                                           18    1935
NP_596869                                                              18    1935
XP_005246888                                                           18    1935
XP_006712788                                                           18    1935
XP_006712787                                                           18    1935
XP_006712786                                                           18    1935
NP_001254479                                                           18    1935
NP_597681                                                              18    1935
NP_733841                                                              17    4312
NP_004671                                                              17    4312
NP_001003895                                                           17    4312
NP_004816                                                              17    4312
NP_001003894                                                           17    4312
NP_001001722                                                           17    4312
NP_060313                                                              16    5631
NP_008851                                                              16    7355
NP_001189364                                                           16    7355
NP_001159436                                                           16    7355
NP_001159435                                                           16    7355
NP_031392                                                              16    7355
NP_001007268                                                           16    7355
NP_002968                                                              16    7355
NP_001182570                                                           16    7355
NP_001035232                                                           16    7355
NP_066287                                                              16    7355
NP_001035233                                                           16    7355
NP_001167560                                                           16    7355
NP_114423                                                              16    7355
NP_001167561                                                           16    7355
XP_005260914                                                           16    7355
XP_005260913                                                           16    7355
XP_005260860                                                           16    7355
XP_005260859                                                           16    7355
XP_005260858                                                           16    7355
XP_005260857                                                           16    7355
XP_006723671                                                           16    7355
XP_006723670                                                           16    7355
XP_005260854                                                           16    7355
XP_006723669                                                           16    7355
XP_006723569                                                           16    7355
XP_005259486                                                           16    7355
XP_006715335                                                           16    7355
XP_005246814                                                           16    7355
XP_005246813                                                           16    7355
XP_005246812                                                           16    7355
XP_005246811                                                           16    7355
XP_005246810                                                           16    7355
XP_005246808                                                           16    7355
XP_005246807                                                           16    7355
XP_005246450                                                           16    7355
XP_005246449                                                           16    7355
NP_071927                                                              16    7355
NP_001073926                                                           16    7355
NP_001137442                                                           16    7355
NP_001137443                                                           16    7355
NP_004815                                                              16    7355
NP_000119                                                              15    9605
NP_001138890                                                           15    9605
NP_001159530                                                           15    9605
NP_003015                                                              15    9605
NP_006018                                                              15    9605
NP_569082                                                              15    9605
NP_003677                                                              15    9605
NP_004990                                                              15    9605
NP_570718                                                              15    9605
NP_542391                                                              15    9605
XP_006724234                                                           15    9605
XP_005261462                                                           15    9605
XP_005261083                                                           15    9605
XP_006716239                                                           15    9605
XP_005248783                                                           15    9605
XP_005248782                                                           15    9605
XP_005248781                                                           15    9605
XP_005248779                                                           15    9605
XP_005248778                                                           15    9605
XP_005248777                                                           15    9605
XP_005248776                                                           15    9605
XP_005262882                                                           15    9605
XP_005262881                                                           15    9605
XP_005262880                                                           15    9605
XP_005262879                                                           15    9605
XP_006714200                                                           15    9605
XP_005262878                                                           15    9605
XP_005273407                                                           15    9605
XP_006711903                                                           15    9605
>NP_004963
          Length = 1132

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   GRCNLKLIM 9
           GR NLKLIM
Sbjct: 921 GRRNLKLIM 929
>XP_005251512
          Length = 1132

 Score = 18.5 bits (36), Expect =  1135
 Identities = 8/9 (88%), Positives = 8/9 (88%)

Query: 1   GRCNLKLIM 9
           GR NLKLIM
Sbjct: 921 GRRNLKLIM 929
>NP_003310
          Length = 26926

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    RCNLKLI 8
            RCN+KL+
Sbjct: 6843 RCNMKLV 6849
>NP_597676
          Length = 27051

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    RCNLKLI 8
            RCN+KL+
Sbjct: 6968 RCNMKLV 6974
>NP_001243779
          Length = 34350

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2     RCNLKLI 8
             RCN+KL+
Sbjct: 14267 RCNMKLV 14273
>NP_596869
          Length = 33423

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2     RCNLKLI 8
             RCN+KL+
Sbjct: 13340 RCNMKLV 13346
>XP_005246888
          Length = 22663

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    RCNLKLI 8
            RCN+KL+
Sbjct: 2580 RCNMKLV 2586
>XP_006712788
          Length = 24022

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    RCNLKLI 8
            RCN+KL+
Sbjct: 3939 RCNMKLV 3945
>XP_006712787
          Length = 33978

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2     RCNLKLI 8
             RCN+KL+
Sbjct: 13895 RCNMKLV 13901
>XP_006712786
          Length = 35484

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2     RCNLKLI 8
             RCN+KL+
Sbjct: 15401 RCNMKLV 15407
>NP_001254479
          Length = 35991

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2     RCNLKLI 8
             RCN+KL+
Sbjct: 15908 RCNMKLV 15914
>NP_597681
          Length = 27118

 Score = 17.7 bits (34), Expect =  1935
 Identities = 5/7 (71%), Positives = 7/7 (100%)

Query: 2    RCNLKLI 8
            RCN+KL+
Sbjct: 7035 RCNMKLV 7041
>NP_733841
          Length = 540

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+KL
Sbjct: 498 RCNIKL 503
>NP_004671
          Length = 554

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+KL
Sbjct: 498 RCNIKL 503
>NP_001003895
          Length = 554

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+KL
Sbjct: 498 RCNIKL 503
>NP_004816
          Length = 541

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+KL
Sbjct: 499 RCNIKL 504
>NP_001003894
          Length = 540

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+KL
Sbjct: 498 RCNIKL 503
>NP_001001722
          Length = 541

 Score = 16.5 bits (31), Expect =  4312
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+KL
Sbjct: 499 RCNIKL 504
>NP_060313
          Length = 211

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/6 (83%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCNL+L
Sbjct: 173 RCNLRL 178
>NP_008851
          Length = 1998

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1575 GECVLKLI 1582
>NP_001189364
          Length = 2009

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1586 GECVLKLI 1593
>NP_001159436
          Length = 1981

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1558 GECVLKLI 1565
>NP_001159435
          Length = 2009

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1586 GECVLKLI 1593
>NP_031392
          Length = 1463

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RCNLKLI 8
           RCN K+I
Sbjct: 116 RCNRKMI 122
>NP_001007268
          Length = 1324

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RCNLKLI 8
           RCN K+I
Sbjct: 116 RCNRKMI 122
>NP_002968
          Length = 1977

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1549 GECVLKLI 1556
>NP_001182570
          Length = 1461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RCNLKLI 8
           RCN K+I
Sbjct: 116 RCNRKMI 122
>NP_001035232
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1576 GECVLKLI 1583
>NP_066287
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1576 GECVLKLI 1583
>NP_001035233
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1576 GECVLKLI 1583
>NP_001167560
          Length = 875

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   CNLKLIM 9
           CNL L+M
Sbjct: 154 CNLDLLM 160
>NP_114423
          Length = 891

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   CNLKLIM 9
           CNL L+M
Sbjct: 170 CNLDLLM 176
>NP_001167561
          Length = 918

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   CNLKLIM 9
           CNL L+M
Sbjct: 197 CNLDLLM 203
>XP_005260914
          Length = 856

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   CNLKLIM 9
           CNL L+M
Sbjct: 135 CNLDLLM 141
>XP_005260913
          Length = 998

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 3   CNLKLIM 9
           CNL L+M
Sbjct: 315 CNLDLLM 321
>XP_005260860
          Length = 455

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_005260859
          Length = 545

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_005260858
          Length = 643

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_005260857
          Length = 677

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_006723671
          Length = 684

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_006723670
          Length = 711

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_005260854
          Length = 711

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_006723669
          Length = 718

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>XP_006723569
          Length = 713

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 215 GMCNLK 220
>XP_005259486
          Length = 713

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 215 GMCNLK 220
>XP_006715335
          Length = 549

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+K+
Sbjct: 507 RCNMKM 512
>XP_005246814
          Length = 1988

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1560 GECVLKLI 1567
>XP_005246813
          Length = 1271

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   GRCNLKLI 8
           G C LKLI
Sbjct: 842 GECVLKLI 849
>XP_005246812
          Length = 1754

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1325 GECVLKLI 1332
>XP_005246811
          Length = 1995

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1566 GECVLKLI 1573
>XP_005246810
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1576 GECVLKLI 1583
>XP_005246808
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1576 GECVLKLI 1583
>XP_005246807
          Length = 2005

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1    GRCNLKLI 8
            G C LKLI
Sbjct: 1576 GECVLKLI 1583
>XP_005246450
          Length = 1461

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RCNLKLI 8
           RCN K+I
Sbjct: 116 RCNRKMI 122
>XP_005246449
          Length = 1463

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 2   RCNLKLI 8
           RCN K+I
Sbjct: 116 RCNRKMI 122
>NP_071927
          Length = 711

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/5 (100%), Positives = 5/5 (100%)

Query: 2   RCNLK 6
           RCNLK
Sbjct: 360 RCNLK 364
>NP_001073926
          Length = 713

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 215 GMCNLK 220
>NP_001137442
          Length = 412

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+K+
Sbjct: 370 RCNMKM 375
>NP_001137443
          Length = 412

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+K+
Sbjct: 370 RCNMKM 375
>NP_004815
          Length = 544

 Score = 15.8 bits (29), Expect =  7355
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 2   RCNLKL 7
           RCN+K+
Sbjct: 502 RCNMKM 507
>NP_000119
          Length = 625

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 344 GKCYLKL 350
>NP_001138890
          Length = 2481

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G C+LKL
Sbjct: 226 GTCSLKL 232
>NP_001159530
          Length = 730

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   GRCNLKLI 8
           G CNL+++
Sbjct: 183 GLCNLQIL 190
>NP_003015
          Length = 1721

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3    CNLKLI 8
            CN+KL+
Sbjct: 1291 CNIKLL 1296
>NP_006018
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   CNLKLI 8
           CN+KL+
Sbjct: 707 CNIKLL 712
>NP_569082
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   CNLKLI 8
           CN+KL+
Sbjct: 707 CNIKLL 712
>NP_003677
          Length = 803

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   CNLKLI 8
           CN+KL+
Sbjct: 707 CNIKLL 712
>NP_004990
          Length = 1285

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>NP_570718
          Length = 754

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/8 (50%), Positives = 7/8 (87%)

Query: 1   GRCNLKLI 8
           G CNL+++
Sbjct: 183 GLCNLQIL 190
>NP_542391
          Length = 300

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 180 GYCNLK 185
>XP_006724234
          Length = 2363

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G C+LKL
Sbjct: 108 GTCSLKL 114
>XP_005261462
          Length = 2473

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G C+LKL
Sbjct: 226 GTCSLKL 232
>XP_005261083
          Length = 1716

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3    CNLKLI 8
            CN+KL+
Sbjct: 1286 CNIKLL 1291
>XP_006716239
          Length = 276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 180 GYCNLK 185
>XP_005248783
          Length = 1253

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005248782
          Length = 1262

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005248781
          Length = 1272

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005248779
          Length = 1276

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005248778
          Length = 1281

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005248777
          Length = 1285

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005248776
          Length = 1294

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/6 (83%), Positives = 5/6 (83%)

Query: 1   GRCNLK 6
           G CNLK
Sbjct: 360 GGCNLK 365
>XP_005262882
          Length = 395

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 345 GKCYLKL 351
>XP_005262881
          Length = 534

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 345 GKCYLKL 351
>XP_005262880
          Length = 536

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 255 GKCYLKL 261
>XP_005262879
          Length = 594

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 345 GKCYLKL 351
>XP_006714200
          Length = 610

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 329 GKCYLKL 335
>XP_005262878
          Length = 626

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/7 (71%), Positives = 6/7 (85%)

Query: 1   GRCNLKL 7
           G+C LKL
Sbjct: 345 GKCYLKL 351
>XP_005273407
          Length = 845

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   CNLKLI 8
           CN+KL+
Sbjct: 706 CNIKLL 711
>XP_006711903
          Length = 846

 Score = 15.4 bits (28), Expect =  9605
 Identities = 4/6 (66%), Positives = 6/6 (100%)

Query: 3   CNLKLI 8
           CN+KL+
Sbjct: 707 CNIKLL 712
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.339    0.152    0.499 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 579,734
Number of extensions: 605
Number of successful extensions: 89
Number of sequences better than 10000.0: 89
Number of HSP's gapped: 89
Number of HSP's successfully gapped: 89
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (16.4 bits)
S2: 28 (15.4 bits)

CANCERTOPE    |     Raghava's Group    |     IMTECH    |     CSIR    |     CRDD    |     GPSR Package