Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 19 869 NP_001277143 19 869 NP_001077383 19 869 NP_001320 19 869 NP_073713 19 869 XP_005269629 19 869 XP_005269628 19 869 XP_005269627 19 869 XP_005269626 19 869 XP_006717706 19 869 XP_005269625 19 869 XP_005269624 19 869 XP_006717705 19 869 XP_005269622 19 869 XP_005269621 19 869 XP_006717704 19 869 XP_005269619 19 869 XP_005269618 19 869 NP_001319 18 1935 NP_001012632 18 1935 XP_005272320 18 1935 XP_005272319 18 1935 XP_005272318 18 1935 NP_570123 17 3301 NP_113676 17 3301 XP_006714595 17 3301 XP_006714594 17 3301 NP_671517 17 4312 NP_056362 17 4312 XP_005258110 16 5631 NP_001009565 16 7355 XP_006715292 16 7355 XP_006712067 16 7355 XP_006712066 16 7355 NP_116056 15 9605 NP_001124174 15 9605 NP_001116427 15 9605 NP_001243241 15 9605 NP_001272997 15 9605 NP_001272998 15 9605 NP_001272996 15 9605 NP_001272999 15 9605 NP_006272 15 9605 NP_001243242 15 9605 XP_006718887 15 9605 XP_005273992 15 9605>NP_001277144 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>NP_001277143 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>NP_001077383 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>NP_001320 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>NP_073713 Length = 985 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 732 GQAVAVRAK 740>XP_005269629 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269628 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269627 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269626 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_006717706 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269625 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269624 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_006717705 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269622 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269621 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_006717704 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269619 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>XP_005269618 Length = 445 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VAVRAK Sbjct: 192 GQAVAVRAK 200>NP_001319 Length = 440 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VA+RAK Sbjct: 186 GQAVALRAK 194>NP_001012632 Length = 429 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VA+RAK Sbjct: 175 GQAVALRAK 183>XP_005272320 Length = 430 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VA+RAK Sbjct: 175 GQAVALRAK 183>XP_005272319 Length = 430 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VA+RAK Sbjct: 175 GQAVALRAK 183>XP_005272318 Length = 441 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQ VA+RAK Sbjct: 186 GQAVALRAK 194>NP_570123 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQV+ ++AK Sbjct: 68 GQVITIKAK 76>NP_113676 Length = 705 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+++AVR K Sbjct: 667 GEIIAVRVK 675>XP_006714595 Length = 378 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQV+ ++AK Sbjct: 68 GQVITIKAK 76>XP_006714594 Length = 527 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQV+ ++AK Sbjct: 68 GQVITIKAK 76>NP_671517 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQVV ++AK Sbjct: 106 GQVVNIKAK 114>NP_056362 Length = 607 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQVV ++AK Sbjct: 106 GQVVNIKAK 114>XP_005258110 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GQVVAVRA 8 GQVVAV A Sbjct: 207 GQVVAVSA 214>NP_001009565 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQVVAVR 7 GQVVAV+ Sbjct: 27 GQVVAVK 33>XP_006715292 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQVVAVRAK 9 G+V A RAK Sbjct: 402 GKVTAARAK 410>XP_006712067 Length = 175 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQVVAVR 7 GQVVAV+ Sbjct: 27 GQVVAVK 33>XP_006712066 Length = 342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQVVAVR 7 GQVVAV+ Sbjct: 27 GQVVAVK 33>NP_116056 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQV+A RA+ Sbjct: 17 GQVLAGRAR 25>NP_001124174 Length = 287 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQV+A RA+ Sbjct: 17 GQVLAGRAR 25>NP_001116427 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 GQV+A RA+ Sbjct: 81 GQVLAGRAR 89>NP_001243241 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQVVAVR 7 GQVVA++ Sbjct: 78 GQVVAIK 84>NP_001272997 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+V+ V+AK Sbjct: 168 GKVIEVKAK 176>NP_001272998 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+V+ V+AK Sbjct: 168 GKVIEVKAK 176>NP_001272996 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+V+ V+AK Sbjct: 168 GKVIEVKAK 176>NP_001272999 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+V+ V+AK Sbjct: 149 GKVIEVKAK 157>NP_006272 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQVVAVR 7 GQVVA++ Sbjct: 50 GQVVAIK 56>NP_001243242 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQVVAVR 7 GQVVA++ Sbjct: 50 GQVVAIK 56>XP_006718887 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+V+ V+AK Sbjct: 168 GKVIEVKAK 176>XP_005273992 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQVVAVRAK 9 G+V+ V+AK Sbjct: 168 GKVIEVKAK 176Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.129 0.324 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 250,840 Number of extensions: 344 Number of successful extensions: 46 Number of sequences better than 10000.0: 46 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 46 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |