Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_064450 20 390 XP_005273257 20 390 NP_060569 17 2528 NP_001258712 17 2528 NP_056240 17 3301 XP_006712046 17 3301 NP_001170978 17 4312 NP_001129706 17 4312 NP_001129705 17 4312 NP_004272 16 5631 NP_115946 16 5631 NP_079029 16 5631 NP_001277255 16 5631 NP_001277254 16 5631 NP_510880 16 5631 NP_065891 16 5631 NP_976063 16 5631 NP_001129980 16 5631 XP_005270344 16 5631 XP_005263215 16 5631 XP_006712824 16 5631 XP_005270828 16 5631 NP_000121 16 7355 NP_004989 16 7355 NP_036467 16 7355 NP_001096078 16 7355 NP_009045 16 7355 NP_001092284 16 7355 NP_001037835 16 7355 XP_006723798 16 7355 XP_005272534 16 7355 XP_005272533 16 7355 XP_005272532 16 7355 XP_005247178 16 7355 NP_001073868 16 7355 NP_001035826 16 7355 NP_003882 15 9605 NP_001243063 15 9605 NP_620311 15 9605 NP_001185748 15 9605 NP_002832 15 9605 NP_001185749 15 9605 NP_001166203 15 9605 NP_068557 15 9605 NP_001166210 15 9605 NP_001035847 15 9605 NP_005125 15 9605 NP_001166214 15 9605 NP_002842 15 9605 NP_001193767 15 9605 XP_006724523 15 9605 XP_006724522 15 9605 XP_005257785 15 9605 XP_006717872 15 9605 XP_006716139 15 9605 XP_005250576 15 9605 XP_005265410 15 9605 XP_005265409 15 9605 NP_001193768 15 9605 NP_002163 15 9605 NP_115510 15 9605>NP_064450 Length = 1722 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GQTLLEKLF 9 G+TLLEKLF Sbjct: 539 GRTLLEKLF 547>XP_005273257 Length = 1726 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GQTLLEKLF 9 G+TLLEKLF Sbjct: 539 GRTLLEKLF 547>NP_060569 Length = 515 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQTLLEKLF 9 G+ L+EKLF Sbjct: 23 GKVLMEKLF 31>NP_001258712 Length = 515 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQTLLEKLF 9 G+ L+EKLF Sbjct: 23 GKVLMEKLF 31>NP_056240 Length = 1720 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GQTLLEKLF 9 GQ+L++KL+ Sbjct: 380 GQSLIDKLY 388>XP_006712046 Length = 1612 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GQTLLEKLF 9 GQ+L++KL+ Sbjct: 272 GQSLIDKLY 280>NP_001170978 Length = 543 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G T +EKLF Sbjct: 38 GHTCVEKLF 46>NP_001129706 Length = 887 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQTLLEKLF 9 G+TL EKL+ Sbjct: 33 GKTLQEKLY 41>NP_001129705 Length = 817 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQTLLEKLF 9 G+TL EKL+ Sbjct: 33 GKTLQEKLY 41>NP_004272 Length = 575 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QT+LEKL Sbjct: 488 QTILEKL 494>NP_115946 Length = 1042 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QTLLEKLF 9 +TL+EK+F Sbjct: 583 KTLIEKMF 590>NP_079029 Length = 1316 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLLEKLF 9 QTLLE+ F Sbjct: 310 QTLLERAF 317>NP_001277255 Length = 587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QTLLEKLF 9 +TL+EK+F Sbjct: 128 KTLIEKMF 135>NP_001277254 Length = 1004 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QTLLEKLF 9 +TL+EK+F Sbjct: 583 KTLIEKMF 590>NP_510880 Length = 2054 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLLEKLF 9 TLLE+LF Sbjct: 896 TLLERLF 902>NP_065891 Length = 1114 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLLEKLF 9 TLL+KLF Sbjct: 4 TLLQKLF 10>NP_976063 Length = 2039 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLLEKLF 9 TLLE+LF Sbjct: 896 TLLERLF 902>NP_001129980 Length = 199 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQTLLEKLF 9 G+ L+EK+F Sbjct: 171 GEPLMEKVF 179>XP_005270344 Length = 574 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QT+LEKL Sbjct: 487 QTILEKL 493>XP_005263215 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 TLLEKLF 9 TLL+KLF Sbjct: 4 TLLQKLF 10>XP_006712824 Length = 1056 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QTLLEKLF 9 QTLLE+ F Sbjct: 310 QTLLERAF 317>XP_005270828 Length = 444 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQTLLEKLF 9 G+ L+EK+F Sbjct: 416 GEPLMEKVF 424>NP_000121 Length = 2224 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GQTLLE 6 GQTLLE Sbjct: 1846 GQTLLE 1851>NP_004989 Length = 1108 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QTLL+KL Sbjct: 479 QTLLQKL 485>NP_036467 Length = 1098 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QTLL+KL Sbjct: 477 QTLLQKL 483>NP_001096078 Length = 2263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GQTLLE 6 GQTLLE Sbjct: 1200 GQTLLE 1205>NP_009045 Length = 1093 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GQTLLEKL 8 GQT+L+K+ Sbjct: 420 GQTVLDKV 427>NP_001092284 Length = 473 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GQTLLEKL 8 GQ LEKL Sbjct: 166 GQNFLEKL 173>NP_001037835 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GQTLLEK 7 GQ LLEK Sbjct: 225 GQALLEK 231>XP_006723798 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G+TL EKL Sbjct: 81 GRTLAEKL 88>XP_005272534 Length = 1071 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QTLL+KL Sbjct: 450 QTLLQKL 456>XP_005272533 Length = 1096 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QTLL+KL Sbjct: 475 QTLLQKL 481>XP_005272532 Length = 1100 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QTLLEKL 8 QTLL+KL Sbjct: 479 QTLLQKL 485>XP_005247178 Length = 2263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GQTLLE 6 GQTLLE Sbjct: 1200 GQTLLE 1205>NP_001073868 Length = 477 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 GQ+L EKL Sbjct: 382 GQSLCEKL 389>NP_001035826 Length = 266 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GQTLLE 6 GQTLLE Sbjct: 79 GQTLLE 84>NP_003882 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G LLE+LF Sbjct: 42 GSYLLEELF 50>NP_001243063 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G LLE+LF Sbjct: 64 GSYLLEELF 72>NP_620311 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTLLEK 7 QTLLEK Sbjct: 36 QTLLEK 41>NP_001185748 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTLLEK 7 QTLLEK Sbjct: 36 QTLLEK 41>NP_002832 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 1146 GKTRLEKQF 1154>NP_001185749 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTLLEK 7 QTLLEK Sbjct: 36 QTLLEK 41>NP_001166203 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G T++EKL Sbjct: 321 GHTVMEKL 328>NP_068557 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G T++EKL Sbjct: 371 GHTVMEKL 378>NP_001166210 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G T++EKL Sbjct: 371 GHTVMEKL 378>NP_001035847 Length = 950 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTLLEK 7 QTLLEK Sbjct: 891 QTLLEK 896>NP_005125 Length = 933 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTLLEK 7 QTLLEK Sbjct: 874 QTLLEK 879>NP_001166214 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G T++EKL Sbjct: 371 GHTVMEKL 378>NP_002842 Length = 2315 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 2019 GKTKLEKQF 2027>NP_001193767 Length = 1455 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 1159 GKTKLEKQF 1167>XP_006724523 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G T++EKL Sbjct: 371 GHTVMEKL 378>XP_006724522 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 G T++EKL Sbjct: 371 GHTVMEKL 378>XP_005257785 Length = 1887 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 GQT LEK+ Sbjct: 1223 GQTDLEKI 1230>XP_006717872 Length = 594 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 QTLLEK 7 QTLLEK Sbjct: 36 QTLLEK 41>XP_006716139 Length = 1869 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 1573 GKTKLEKQF 1581>XP_005250576 Length = 2308 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 2012 GKTKLEKQF 2020>XP_005265410 Length = 1416 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 1117 GKTRLEKQF 1125>XP_005265409 Length = 1431 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 1132 GKTRLEKQF 1140>NP_001193768 Length = 1448 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQTLLEKLF 9 G+T LEK F Sbjct: 1152 GKTKLEKQF 1160>NP_002163 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QTLLEKLF 9 +TLLEK + Sbjct: 102 ETLLEKFY 109>NP_115510 Length = 1663 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQTLLEKL 8 GQT LEK+ Sbjct: 1057 GQTDLEKI 1064Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.147 0.393 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,825 Number of extensions: 1144 Number of successful extensions: 61 Number of sequences better than 10000.0: 61 Number of HSP's gapped: 61 Number of HSP's successfully gapped: 61 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |