Cancertope

In silico Platform for designing genome-based
Personalized immunotherapy or Vaccine against Cancer

Blast-Search of mutated query peptide against human proteome

BLAST Search Results
BLASTP 2.2.15 [Oct-15-2006]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= User_input
         (9 letters)

Database: HUMAN_PROTEOME_FASTA 
           71,491 sequences; 45,948,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

NP_064450                                                              20     390
XP_005273257                                                           20     390
NP_060569                                                              17    2528
NP_001258712                                                           17    2528
NP_056240                                                              17    3301
XP_006712046                                                           17    3301
NP_001170978                                                           17    4312
NP_001129706                                                           17    4312
NP_001129705                                                           17    4312
NP_004272                                                              16    5631
NP_115946                                                              16    5631
NP_079029                                                              16    5631
NP_001277255                                                           16    5631
NP_001277254                                                           16    5631
NP_510880                                                              16    5631
NP_065891                                                              16    5631
NP_976063                                                              16    5631
NP_001129980                                                           16    5631
XP_005270344                                                           16    5631
XP_005263215                                                           16    5631
XP_006712824                                                           16    5631
XP_005270828                                                           16    5631
NP_000121                                                              16    7355
NP_004989                                                              16    7355
NP_036467                                                              16    7355
NP_001096078                                                           16    7355
NP_009045                                                              16    7355
NP_001092284                                                           16    7355
NP_001037835                                                           16    7355
XP_006723798                                                           16    7355
XP_005272534                                                           16    7355
XP_005272533                                                           16    7355
XP_005272532                                                           16    7355
XP_005247178                                                           16    7355
NP_001073868                                                           16    7355
NP_001035826                                                           16    7355
NP_003882                                                              15    9605
NP_001243063                                                           15    9605
NP_620311                                                              15    9605
NP_001185748                                                           15    9605
NP_002832                                                              15    9605
NP_001185749                                                           15    9605
NP_001166203                                                           15    9605
NP_068557                                                              15    9605
NP_001166210                                                           15    9605
NP_001035847                                                           15    9605
NP_005125                                                              15    9605
NP_001166214                                                           15    9605
NP_002842                                                              15    9605
NP_001193767                                                           15    9605
XP_006724523                                                           15    9605
XP_006724522                                                           15    9605
XP_005257785                                                           15    9605
XP_006717872                                                           15    9605
XP_006716139                                                           15    9605
XP_005250576                                                           15    9605
XP_005265410                                                           15    9605
XP_005265409                                                           15    9605
NP_001193768                                                           15    9605
NP_002163                                                              15    9605
NP_115510                                                              15    9605
>NP_064450
          Length = 1722

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GQTLLEKLF 9
           G+TLLEKLF
Sbjct: 539 GRTLLEKLF 547
>XP_005273257
          Length = 1726

 Score = 20.0 bits (40), Expect =   390
 Identities = 8/9 (88%), Positives = 9/9 (100%)

Query: 1   GQTLLEKLF 9
           G+TLLEKLF
Sbjct: 539 GRTLLEKLF 547
>NP_060569
          Length = 515

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GQTLLEKLF 9
          G+ L+EKLF
Sbjct: 23 GKVLMEKLF 31
>NP_001258712
          Length = 515

 Score = 17.3 bits (33), Expect =  2528
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GQTLLEKLF 9
          G+ L+EKLF
Sbjct: 23 GKVLMEKLF 31
>NP_056240
          Length = 1720

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GQTLLEKLF 9
           GQ+L++KL+
Sbjct: 380 GQSLIDKLY 388
>XP_006712046
          Length = 1612

 Score = 16.9 bits (32), Expect =  3301
 Identities = 5/9 (55%), Positives = 9/9 (100%)

Query: 1   GQTLLEKLF 9
           GQ+L++KL+
Sbjct: 272 GQSLIDKLY 280
>NP_001170978
          Length = 543

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GQTLLEKLF 9
          G T +EKLF
Sbjct: 38 GHTCVEKLF 46
>NP_001129706
          Length = 887

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GQTLLEKLF 9
          G+TL EKL+
Sbjct: 33 GKTLQEKLY 41
>NP_001129705
          Length = 817

 Score = 16.5 bits (31), Expect =  4312
 Identities = 6/9 (66%), Positives = 8/9 (88%)

Query: 1  GQTLLEKLF 9
          G+TL EKL+
Sbjct: 33 GKTLQEKLY 41
>NP_004272
          Length = 575

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QT+LEKL
Sbjct: 488 QTILEKL 494
>NP_115946
          Length = 1042

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QTLLEKLF 9
           +TL+EK+F
Sbjct: 583 KTLIEKMF 590
>NP_079029
          Length = 1316

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   QTLLEKLF 9
           QTLLE+ F
Sbjct: 310 QTLLERAF 317
>NP_001277255
          Length = 587

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QTLLEKLF 9
           +TL+EK+F
Sbjct: 128 KTLIEKMF 135
>NP_001277254
          Length = 1004

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 2   QTLLEKLF 9
           +TL+EK+F
Sbjct: 583 KTLIEKMF 590
>NP_510880
          Length = 2054

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   TLLEKLF 9
           TLLE+LF
Sbjct: 896 TLLERLF 902
>NP_065891
          Length = 1114

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TLLEKLF 9
          TLL+KLF
Sbjct: 4  TLLQKLF 10
>NP_976063
          Length = 2039

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3   TLLEKLF 9
           TLLE+LF
Sbjct: 896 TLLERLF 902
>NP_001129980
          Length = 199

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   GQTLLEKLF 9
           G+ L+EK+F
Sbjct: 171 GEPLMEKVF 179
>XP_005270344
          Length = 574

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QT+LEKL
Sbjct: 487 QTILEKL 493
>XP_005263215
          Length = 1144

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 3  TLLEKLF 9
          TLL+KLF
Sbjct: 4  TLLQKLF 10
>XP_006712824
          Length = 1056

 Score = 16.2 bits (30), Expect =  5631
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 2   QTLLEKLF 9
           QTLLE+ F
Sbjct: 310 QTLLERAF 317
>XP_005270828
          Length = 444

 Score = 16.2 bits (30), Expect =  5631
 Identities = 5/9 (55%), Positives = 8/9 (88%)

Query: 1   GQTLLEKLF 9
           G+ L+EK+F
Sbjct: 416 GEPLMEKVF 424
>NP_000121
          Length = 2224

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GQTLLE 6
            GQTLLE
Sbjct: 1846 GQTLLE 1851
>NP_004989
          Length = 1108

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QTLL+KL
Sbjct: 479 QTLLQKL 485
>NP_036467
          Length = 1098

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QTLL+KL
Sbjct: 477 QTLLQKL 483
>NP_001096078
          Length = 2263

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GQTLLE 6
            GQTLLE
Sbjct: 1200 GQTLLE 1205
>NP_009045
          Length = 1093

 Score = 15.8 bits (29), Expect =  7355
 Identities = 5/8 (62%), Positives = 8/8 (100%)

Query: 1   GQTLLEKL 8
           GQT+L+K+
Sbjct: 420 GQTVLDKV 427
>NP_001092284
          Length = 473

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 6/8 (75%)

Query: 1   GQTLLEKL 8
           GQ  LEKL
Sbjct: 166 GQNFLEKL 173
>NP_001037835
          Length = 326

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 6/7 (85%)

Query: 1   GQTLLEK 7
           GQ LLEK
Sbjct: 225 GQALLEK 231
>XP_006723798
          Length = 916

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1  GQTLLEKL 8
          G+TL EKL
Sbjct: 81 GRTLAEKL 88
>XP_005272534
          Length = 1071

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QTLL+KL
Sbjct: 450 QTLLQKL 456
>XP_005272533
          Length = 1096

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QTLL+KL
Sbjct: 475 QTLLQKL 481
>XP_005272532
          Length = 1100

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/7 (85%), Positives = 7/7 (100%)

Query: 2   QTLLEKL 8
           QTLL+KL
Sbjct: 479 QTLLQKL 485
>XP_005247178
          Length = 2263

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1    GQTLLE 6
            GQTLLE
Sbjct: 1200 GQTLLE 1205
>NP_001073868
          Length = 477

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           GQ+L EKL
Sbjct: 382 GQSLCEKL 389
>NP_001035826
          Length = 266

 Score = 15.8 bits (29), Expect =  7355
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 1  GQTLLE 6
          GQTLLE
Sbjct: 79 GQTLLE 84
>NP_003882
          Length = 400

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GQTLLEKLF 9
          G  LLE+LF
Sbjct: 42 GSYLLEELF 50
>NP_001243063
          Length = 422

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1  GQTLLEKLF 9
          G  LLE+LF
Sbjct: 64 GSYLLEELF 72
>NP_620311
          Length = 594

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  QTLLEK 7
          QTLLEK
Sbjct: 36 QTLLEK 41
>NP_001185748
          Length = 602

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  QTLLEK 7
          QTLLEK
Sbjct: 36 QTLLEK 41
>NP_002832
          Length = 1445

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 1146 GKTRLEKQF 1154
>NP_001185749
          Length = 594

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  QTLLEK 7
          QTLLEK
Sbjct: 36 QTLLEK 41
>NP_001166203
          Length = 480

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           G T++EKL
Sbjct: 321 GHTVMEKL 328
>NP_068557
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           G T++EKL
Sbjct: 371 GHTVMEKL 378
>NP_001166210
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           G T++EKL
Sbjct: 371 GHTVMEKL 378
>NP_001035847
          Length = 950

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   QTLLEK 7
           QTLLEK
Sbjct: 891 QTLLEK 896
>NP_005125
          Length = 933

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2   QTLLEK 7
           QTLLEK
Sbjct: 874 QTLLEK 879
>NP_001166214
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           G T++EKL
Sbjct: 371 GHTVMEKL 378
>NP_002842
          Length = 2315

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 2019 GKTKLEKQF 2027
>NP_001193767
          Length = 1455

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 1159 GKTKLEKQF 1167
>XP_006724523
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           G T++EKL
Sbjct: 371 GHTVMEKL 378
>XP_006724522
          Length = 530

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 1   GQTLLEKL 8
           G T++EKL
Sbjct: 371 GHTVMEKL 378
>XP_005257785
          Length = 1887

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GQTLLEKL 8
            GQT LEK+
Sbjct: 1223 GQTDLEKI 1230
>XP_006717872
          Length = 594

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/6 (100%), Positives = 6/6 (100%)

Query: 2  QTLLEK 7
          QTLLEK
Sbjct: 36 QTLLEK 41
>XP_006716139
          Length = 1869

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 1573 GKTKLEKQF 1581
>XP_005250576
          Length = 2308

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 2012 GKTKLEKQF 2020
>XP_005265410
          Length = 1416

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 1117 GKTRLEKQF 1125
>XP_005265409
          Length = 1431

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 1132 GKTRLEKQF 1140
>NP_001193768
          Length = 1448

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/9 (66%), Positives = 7/9 (77%)

Query: 1    GQTLLEKLF 9
            G+T LEK F
Sbjct: 1152 GKTKLEKQF 1160
>NP_002163
          Length = 189

 Score = 15.4 bits (28), Expect =  9605
 Identities = 5/8 (62%), Positives = 7/8 (87%)

Query: 2   QTLLEKLF 9
           +TLLEK +
Sbjct: 102 ETLLEKFY 109
>NP_115510
          Length = 1663

 Score = 15.4 bits (28), Expect =  9605
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query: 1    GQTLLEKL 8
            GQT LEK+
Sbjct: 1057 GQTDLEKI 1064
  Database: HUMAN_PROTEOME_FASTA
    Posted date:  May 26, 2014 10:46 AM
  Number of letters in database: 45,948,801
  Number of sequences in database:  71,491
  
Lambda     K      H
   0.324    0.147    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 71491
Number of Hits to DB: 563,825
Number of extensions: 1144
Number of successful extensions: 61
Number of sequences better than 10000.0: 61
Number of HSP's gapped: 61
Number of HSP's successfully gapped: 61
Length of query: 9
Length of database: 45,948,801
Length adjustment: 0
Effective length of query: 9
Effective length of database: 45,948,801
Effective search space: 413539209
Effective search space used: 413539209
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 28 (15.9 bits)
S2: 28 (15.4 bits)

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