Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 18 1935 XP_005269721 18 1935 NP_003226 17 4312 NP_031371 17 4312 XP_005266819 17 4312 XP_006722604 17 4312 XP_005251100 17 4312 XP_006716686 17 4312 XP_005251099 17 4312 XP_005251097 17 4312 XP_005251095 17 4312 XP_006716685 17 4312 NP_001274152 16 5631 NP_001244286 16 5631 NP_054858 16 5631 NP_001074295 16 7355 NP_001245207 16 7355 NP_001245205 16 7355 NP_001245206 16 7355 XP_005272427 16 7355 XP_005272426 16 7355 XP_005266874 16 7355 XP_005266873 16 7355 NP_443145 16 7355 NP_036222 15 9605 NP_694558 15 9605 NP_112210 15 9605 NP_001274270 15 9605 NP_001078880 15 9605 NP_001229577 15 9605 NP_001274269 15 9605 NP_065852 15 9605 NP_001137236 15 9605 NP_001137235 15 9605 NP_055690 15 9605 XP_005248994 15 9605 XP_005248993 15 9605 XP_005248992 15 9605 XP_005248990 15 9605 XP_005248991 15 9605 XP_006715084 15 9605 XP_005248298 15 9605 XP_006710599 15 9605 XP_006710598 15 9605 XP_006710596 15 9605 XP_006710595 15 9605 XP_006710594 15 9605 XP_006710593 15 9605 XP_006710592 15 9605 XP_006710591 15 9605 XP_006710590 15 9605 XP_006710589 15 9605 XP_006710587 15 9605 XP_006710586 15 9605 XP_006710585 15 9605 XP_005270755 15 9605 XP_006710584 15 9605 XP_005270754 15 9605 XP_005270753 15 9605 XP_006710583 15 9605 XP_005270752 15 9605 XP_006710582 15 9605 XP_005270751 15 9605 XP_006710306 15 9605>NP_036462 Length = 2073 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 GQS SSQKS Sbjct: 502 GQSPSSQKS 510>XP_005269721 Length = 2073 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 GQS SSQKS Sbjct: 502 GQSPSSQKS 510>NP_003226 Length = 2768 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1870 QSLSSQK 1876>NP_031371 Length = 1845 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 G SLSSQK Sbjct: 1711 GPSLSSQK 1718>XP_005266819 Length = 1790 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 G SLSSQK Sbjct: 1656 GPSLSSQK 1663>XP_006722604 Length = 1847 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 G SLSSQK Sbjct: 1713 GPSLSSQK 1720>XP_005251100 Length = 2103 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1870 QSLSSQK 1876>XP_006716686 Length = 2111 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1870 QSLSSQK 1876>XP_005251099 Length = 2121 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1870 QSLSSQK 1876>XP_005251097 Length = 2178 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1870 QSLSSQK 1876>XP_005251095 Length = 2704 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1806 QSLSSQK 1812>XP_006716685 Length = 2747 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 QSLSSQK 8 QSLSSQK Sbjct: 1870 QSLSSQK 1876>NP_001274152 Length = 1791 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+S +SQKS Sbjct: 724 GRSFNSQKS 732>NP_001244286 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 GQ LSS++S Sbjct: 686 GQDLSSEQS 694>NP_054858 Length = 1791 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+S +SQKS Sbjct: 724 GRSFNSQKS 732>NP_001074295 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 GQ LSS++S Sbjct: 520 GQGLSSRES 528>NP_001245207 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQSLSSQ 7 G+SLSSQ Sbjct: 352 GESLSSQ 358>NP_001245205 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQSLSSQ 7 G+SLSSQ Sbjct: 352 GESLSSQ 358>NP_001245206 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQSLSSQ 7 G+SLSSQ Sbjct: 352 GESLSSQ 358>XP_005272427 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 GQ LSS++S Sbjct: 520 GQGLSSRES 528>XP_005272426 Length = 1406 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 GQ LSS++S Sbjct: 520 GQGLSSRES 528>XP_005266874 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQSLSSQ 7 G+SLSSQ Sbjct: 352 GESLSSQ 358>XP_005266873 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQSLSSQ 7 G+SLSSQ Sbjct: 352 GESLSSQ 358>NP_443145 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GQSLSSQ 7 G+SLSSQ Sbjct: 352 GESLSSQ 358>NP_036222 Length = 5430 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 3450 GQSLSSLTS 3458>NP_694558 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+SLSS+ S Sbjct: 118 GESLSSRAS 126>NP_112210 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 181 GQSLSSSQ 188>NP_001274270 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+SLSS+ S Sbjct: 118 GESLSSRMS 126>NP_001078880 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+SLSS+ S Sbjct: 281 GESLSSRAS 289>NP_001229577 Length = 580 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 181 GQSLSSSQ 188>NP_001274269 Length = 279 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+SLSS+ S Sbjct: 118 GESLSSRAS 126>NP_065852 Length = 414 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+SLSS K+ Sbjct: 252 GESLSSGKT 260>NP_001137236 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GQSLSSQK 8 GQ SSQK Sbjct: 25 GQDTSSQK 32>NP_001137235 Length = 318 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GQSLSSQK 8 GQ SSQK Sbjct: 25 GQDTSSQK 32>NP_055690 Length = 1648 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSLSSQKS 9 Q LSSQK+ Sbjct: 967 QELSSQKA 974>XP_005248994 Length = 488 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 89 GQSLSSSQ 96>XP_005248993 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 89 GQSLSSSQ 96>XP_005248992 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 181 GQSLSSSQ 188>XP_005248990 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 181 GQSLSSSQ 188>XP_005248991 Length = 649 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 181 GQSLSSSQ 188>XP_006715084 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSLSSQK 8 GQSLSS + Sbjct: 182 GQSLSSSQ 189>XP_005248298 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQSLSSQKS 9 G+SLSS+ S Sbjct: 281 GESLSSRMS 289>XP_006710599 Length = 5656 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 3610 GQSLSSLTS 3618>XP_006710598 Length = 7553 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5507 GQSLSSLTS 5515>XP_006710596 Length = 7512 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5466 GQSLSSLTS 5474>XP_006710595 Length = 7526 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5480 GQSLSSLTS 5488>XP_006710594 Length = 7528 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5482 GQSLSSLTS 5490>XP_006710593 Length = 7539 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5493 GQSLSSLTS 5501>XP_006710592 Length = 7544 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5498 GQSLSSLTS 5506>XP_006710591 Length = 7558 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5512 GQSLSSLTS 5520>XP_006710590 Length = 7563 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5517 GQSLSSLTS 5525>XP_006710589 Length = 7595 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5549 GQSLSSLTS 5557>XP_006710587 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5599 GQSLSSLTS 5607>XP_006710586 Length = 7645 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_006710585 Length = 7657 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_005270755 Length = 7663 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_006710584 Length = 7686 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_005270754 Length = 7694 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_005270753 Length = 7700 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_006710583 Length = 7702 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5656 GQSLSSLTS 5664>XP_005270752 Length = 7717 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_006710582 Length = 7720 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_005270751 Length = 7723 Score = 15.4 bits (28), Expect = 9605 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSLSS S Sbjct: 5677 GQSLSSLTS 5685>XP_006710306 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSLSSQKS 9 GQSL Q+S Sbjct: 92 GQSLGLQRS 100Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.277 0.0947 0.205 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,856 Number of extensions: 819 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 18 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (14.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |