Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115803 21 229 NP_001120965 16 5631 NP_066187 16 5631 NP_001139 16 5631 NP_859063 16 5631 XP_006714256 16 5631 XP_006714255 16 5631 XP_005263005 16 5631 XP_006714254 16 5631 XP_006714253 16 5631 XP_005263002 16 5631 XP_005262999 16 5631 XP_006714252 16 5631 XP_006714251 16 5631 NP_005518 16 7355 NP_006083 16 7355 NP_775833 16 7355 NP_056386 16 7355 NP_001273508 16 7355 NP_001273509 16 7355 XP_005275459 16 7355 XP_005275458 16 7355 XP_005275456 16 7355 XP_005275031 16 7355 XP_005275030 16 7355 XP_005275027 16 7355 XP_005272874 16 7355 XP_005272873 16 7355 XP_005272870 16 7355 XP_005274919 16 7355 XP_005274918 16 7355 XP_005274916 16 7355 XP_006715700 16 7355 XP_006715699 16 7355 XP_005249632 16 7355 XP_005249631 16 7355 XP_005249630 16 7355 XP_006715698 16 7355 XP_006715697 16 7355 XP_005249629 16 7355 XP_006715696 16 7355 XP_005249625 16 7355 XP_006715520 16 7355 XP_005249128 16 7355 XP_005249130 16 7355 XP_005249127 16 7355 XP_006715086 16 7355 XP_005248997 16 7355 NP_001093879 16 7355 NP_060250 15 9605 XP_006716523 15 9605 XP_006716522 15 9605 XP_005251324 15 9605 XP_005251323 15 9605>NP_115803 Length = 1156 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 GQSKVM NY Sbjct: 505 GQSKVMANY 513>NP_001120965 Length = 1863 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 200 QSKMMVN 206>NP_066187 Length = 1872 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 221 QSKMMVN 227>NP_001139 Length = 3957 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 221 QSKMMVN 227>NP_859063 Length = 995 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSKVMVN 8 GQ+ VMVN Sbjct: 408 GQTDVMVN 415>XP_006714256 Length = 1901 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_006714255 Length = 1970 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_005263005 Length = 2019 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_006714254 Length = 2049 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_006714253 Length = 2069 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_005263002 Length = 4072 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 221 QSKMMVN 227>XP_005262999 Length = 4147 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_006714252 Length = 4153 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>XP_006714251 Length = 4165 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSK+MVN Sbjct: 253 QSKMMVN 259>NP_005518 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>NP_006083 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>NP_775833 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+S+V+ NY Sbjct: 337 GRSEVIYNY 345>NP_056386 Length = 1112 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GQSKVMVNY 9 G SK+ +NY Sbjct: 907 GLSKIRLNY 915>NP_001273508 Length = 253 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+S+V+ NY Sbjct: 171 GRSEVIYNY 179>NP_001273509 Length = 274 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+S+V+ NY Sbjct: 192 GRSEVIYNY 200>XP_005275459 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005275458 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005275456 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 165 GKPKVLVSY 173>XP_005275031 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005275030 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005275027 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 165 GKPKVLVSY 173>XP_005272874 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005272873 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005272870 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 165 GKPKVLVSY 173>XP_005274919 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005274918 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005274916 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 165 GKPKVLVSY 173>XP_006715700 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_006715699 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_005249632 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_005249631 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_005249630 Length = 925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_006715698 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_006715697 Length = 952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_005249629 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_006715696 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_005249625 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QSKVMVN 8 QSKV+VN Sbjct: 116 QSKVVVN 122>XP_006715520 Length = 1056 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GQSKVMVNY 9 G SK+ +NY Sbjct: 851 GLSKIRLNY 859>XP_005249128 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005249130 Length = 641 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 101 GKPKVLVSY 109>XP_005249127 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+ KV+V+Y Sbjct: 165 GKPKVLVSY 173>XP_006715086 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+S+V+ NY Sbjct: 337 GRSEVIYNY 345>XP_005248997 Length = 419 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 G+S+V+ NY Sbjct: 337 GRSEVIYNY 345>NP_001093879 Length = 1105 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GQSKVMVNY 9 G SK+ +NY Sbjct: 900 GLSKIRLNY 908>NP_060250 Length = 2997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 GQ++ +VN+ Sbjct: 1674 GQTRALVNH 1682>XP_006716523 Length = 1912 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 GQ++ +VN+ Sbjct: 589 GQTRALVNH 597>XP_006716522 Length = 2192 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 GQ++ +VN+ Sbjct: 869 GQTRALVNH 877>XP_005251324 Length = 2996 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 GQ++ +VN+ Sbjct: 1674 GQTRALVNH 1682>XP_005251323 Length = 2997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GQSKVMVNY 9 GQ++ +VN+ Sbjct: 1674 GQTRALVNH 1682Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.312 0.126 0.338 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 347,781 Number of extensions: 504 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |