Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_003290 19 869 NP_065107 17 4312 NP_055811 17 4312 XP_006719055 17 4312 XP_005253773 17 4312 XP_005247296 17 4312 XP_006713604 17 4312 XP_005247295 17 4312 NP_001124432 17 4312 NP_001185896 16 5631 NP_001185894 16 5631 NP_001152759 16 5631 NP_000356 16 5631 NP_005227 16 7355 NP_060009 16 7355 XP_006721125 16 7355 NP_005316 16 7355 NP_055984 16 7355 NP_000247 15 9605 NP_000107 15 9605 NP_851830 15 9605 NP_851828 15 9605 NP_851829 15 9605 NP_116165 15 9605 NP_001269877 15 9605 NP_001269609 15 9605 NP_001269608 15 9605 NP_001269610 15 9605 NP_038464 15 9605 NP_995314 15 9605 NP_078904 15 9605 NP_001182412 15 9605 XP_006724905 15 9605 XP_006724904 15 9605 XP_006724902 15 9605 XP_006724901 15 9605 XP_006724900 15 9605 XP_006724899 15 9605 XP_006718301 15 9605 XP_005269685 15 9605 XP_005269684 15 9605 XP_005269683 15 9605 XP_005269681 15 9605 XP_006717770 15 9605 XP_005269679 15 9605 XP_005251961 15 9605 XP_006717107 15 9605 XP_006717106 15 9605 XP_006717105 15 9605 XP_005251958 15 9605 XP_006712264 15 9605 XP_006712263 15 9605>NP_003290 Length = 803 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQSISELIG 9 GQS SELIG Sbjct: 185 GQSTSELIG 193>NP_065107 Length = 552 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SISELIG 9 SISELIG Sbjct: 151 SISELIG 157>NP_055811 Length = 1655 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 G SIS LIG Sbjct: 1155 GSSISALIG 1163>XP_006719055 Length = 419 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SISELIG 9 SISELIG Sbjct: 151 SISELIG 157>XP_005253773 Length = 509 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 SISELIG 9 SISELIG Sbjct: 151 SISELIG 157>XP_005247296 Length = 1673 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 G SIS LIG Sbjct: 1173 GSSISALIG 1181>XP_006713604 Length = 1685 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 G SIS LIG Sbjct: 1185 GSSISALIG 1193>XP_005247295 Length = 1705 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 G SIS LIG Sbjct: 1205 GSSISALIG 1213>NP_001124432 Length = 1693 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 G SIS LIG Sbjct: 1193 GSSISALIG 1201>NP_001185896 Length = 857 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSISELIG 9 G ++SE+IG Sbjct: 833 GTTVSEIIG 841>NP_001185894 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GQSISELIG 9 G ++SE+IG Sbjct: 770 GTTVSEIIG 778>NP_001152759 Length = 286 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSISELIG 9 QS+ ELIG Sbjct: 57 QSLGELIG 64>NP_000356 Length = 249 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QSISELIG 9 QS+ ELIG Sbjct: 20 QSLGELIG 27>NP_005227 Length = 916 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +SIS+LIG Sbjct: 727 KSISDLIG 734>NP_060009 Length = 4116 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSISELIG 9 Q ISE++G Sbjct: 958 QQISEIVG 965>XP_006721125 Length = 4070 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 QSISELIG 9 Q ISE++G Sbjct: 912 QQISEIVG 919>NP_005316 Length = 215 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SELI Sbjct: 40 GPSVSELI 47>NP_055984 Length = 365 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 GQS+ EL+ Sbjct: 3 GQSVEELL 10>NP_000247 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GQSISELI 8 GQ+++ELI Sbjct: 532 GQALAELI 539>NP_000107 Length = 292 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 232 GQKITVLIG 240>NP_851830 Length = 248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 188 GQKITVLIG 196>NP_851828 Length = 262 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 202 GQKITVLIG 210>NP_851829 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 218 GQKITVLIG 226>NP_116165 Length = 2540 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1572 GNSVSEII 1579>NP_001269877 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1390 GNSVSEII 1397>NP_001269609 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 593 GESVSEL 599>NP_001269608 Length = 1478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 593 GESVSEL 599>NP_001269610 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 572 GESVSEL 578>NP_038464 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +S+SEL+G Sbjct: 837 RSLSELLG 844>NP_995314 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +S+SEL+G Sbjct: 843 RSLSELLG 850>NP_078904 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +SIS+L+G Sbjct: 143 ESISDLLG 150>NP_001182412 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +SIS+L+G Sbjct: 143 ESISDLLG 150>XP_006724905 Length = 193 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 133 GQKITVLIG 141>XP_006724904 Length = 223 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 163 GQKITVLIG 171>XP_006724902 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 206 GQKITVLIG 214>XP_006724901 Length = 296 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 236 GQKITVLIG 244>XP_006724900 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 245 GQKITVLIG 253>XP_006724899 Length = 310 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQSISELIG 9 GQ I+ LIG Sbjct: 250 GQKITVLIG 258>XP_006718301 Length = 1268 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GQSISELI 8 GQ+++ELI Sbjct: 526 GQALAELI 533>XP_005269685 Length = 1700 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1572 GNSVSEII 1579>XP_005269684 Length = 2032 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1572 GNSVSEII 1579>XP_005269683 Length = 2252 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1284 GNSVSEII 1291>XP_005269681 Length = 2321 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1353 GNSVSEII 1360>XP_006717770 Length = 2358 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1390 GNSVSEII 1397>XP_005269679 Length = 2502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GQSISELI 8 G S+SE+I Sbjct: 1534 GNSVSEII 1541>XP_005251961 Length = 1433 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 593 GESVSEL 599>XP_006717107 Length = 1439 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 572 GESVSEL 578>XP_006717106 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 593 GESVSEL 599>XP_006717105 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 593 GESVSEL 599>XP_005251958 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GQSISEL 7 G+S+SEL Sbjct: 593 GESVSEL 599>XP_006712264 Length = 1126 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +S+SEL+G Sbjct: 835 RSLSELLG 842>XP_006712263 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 QSISELIG 9 +S+SEL+G Sbjct: 841 RSLSELLG 848Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.135 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 423,538 Number of extensions: 928 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |