Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 20 509 NP_001243397 20 509 XP_005269721 20 509 NP_001229416 17 4312 NP_001229417 17 4312 NP_055852 17 4312 XP_005269712 17 4312 XP_006717788 17 4312 XP_005269710 17 4312 XP_005269709 17 4312 XP_005269708 17 4312 XP_005269706 17 4312 XP_005269705 17 4312 NP_958441 16 7355 NP_958439 16 7355 NP_005219 16 7355 NP_001699 16 7355 NP_001185744 16 7355 XP_005275558 16 7355 XP_005275391 16 7355 XP_005275259 16 7355 XP_005274965 16 7355 XP_005272815 16 7355 XP_005274885 16 7355 XP_005248836 16 7355 NP_001136061 15 9605 NP_001136060 15 9605 NP_001136059 15 9605 NP_001136062 15 9605 NP_055038 15 9605 XP_006710725 15 9605 XP_005270953 15 9605 XP_006710724 15 9605 XP_006710723 15 9605 XP_005270951 15 9605 XP_005270950 15 9605 XP_005270948 15 9605 XP_006710722 15 9605 XP_006710721 15 9605 XP_006710720 15 9605 XP_006710719 15 9605 XP_005270952 15 9605>NP_036462 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 GQKTKV TT Sbjct: 375 GQKTKVCTT 383Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 G TK++TT Sbjct: 408 GATTKITTT 416>NP_001243397 Length = 1890 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 GQKTKV TT Sbjct: 375 GQKTKVCTT 383Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 G TK++TT Sbjct: 408 GATTKITTT 416>XP_005269721 Length = 2073 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 GQKTKV TT Sbjct: 375 GQKTKVCTT 383Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 G TK++TT Sbjct: 408 GATTKITTT 416>NP_001229416 Length = 1837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>NP_001229417 Length = 1892 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>NP_055852 Length = 1842 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>XP_005269712 Length = 1800 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 782 GKKNKVSTS 790>XP_006717788 Length = 1829 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>XP_005269710 Length = 1834 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>XP_005269709 Length = 1871 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 782 GKKNKVSTS 790>XP_005269708 Length = 1897 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>XP_005269706 Length = 1900 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>XP_005269705 Length = 1905 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GQKTKVSTT 9 G+K KVST+ Sbjct: 816 GKKNKVSTS 824>NP_958441 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GQKTKV 6 GQKTK+ Sbjct: 485 GQKTKI 490>NP_958439 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GQKTKV 6 GQKTK+ Sbjct: 485 GQKTKI 490>NP_005219 Length = 1210 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GQKTKV 6 GQKTK+ Sbjct: 485 GQKTKI 490>NP_001699 Length = 348 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 QKTKVST 8 QKT+VST Sbjct: 333 QKTEVST 339>NP_001185744 Length = 1773 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 204 EATKVSTT 211Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 953 ETTKVSTT 960>XP_005275558 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>XP_005275391 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>XP_005275259 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>XP_005274965 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>XP_005272815 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>XP_005274885 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>XP_005248836 Length = 1776 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 207 EATKVSTT 214Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 QKTKVSTT 9 + TKVSTT Sbjct: 956 ETTKVSTT 963>NP_001136061 Length = 297 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 125 GQQTTSSTT 133>NP_001136060 Length = 354 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>NP_001136059 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>NP_001136062 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>NP_055038 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>XP_006710725 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 249 GQQTTSSTT 257>XP_005270953 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>XP_006710724 Length = 439 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>XP_006710723 Length = 440 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 249 GQQTTSSTT 257>XP_005270951 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>XP_005270950 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 163 GQQTTSSTT 171>XP_005270948 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 183 GQQTTSSTT 191>XP_006710722 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 192 GQQTTSSTT 200>XP_006710721 Length = 525 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 249 GQQTTSSTT 257>XP_006710720 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 233 GQQTTSSTT 241>XP_006710719 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 242 GQQTTSSTT 250>XP_005270952 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GQKTKVSTT 9 GQ+T STT Sbjct: 249 GQQTTSSTT 257Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.289 0.103 0.247 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 383,900 Number of extensions: 424 Number of successful extensions: 53 Number of sequences better than 10000.0: 42 Number of HSP's gapped: 53 Number of HSP's successfully gapped: 53 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.0 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |