Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 21 175 XP_005271621 21 175 XP_006718907 21 175 XP_006718906 21 175 XP_005271619 21 175 XP_005271618 21 175 XP_005254442 17 3301 NP_002364 17 3301 NP_079455 16 5631 NP_065076 16 5631 NP_056502 16 5631 NP_001276916 16 5631 XP_006723662 16 5631 XP_005260825 16 5631 XP_006723661 16 5631 XP_005248772 16 5631 XP_005248771 16 5631 XP_005248770 16 5631 XP_005273222 16 5631 XP_006711450 16 5631 XP_005273221 16 5631 NP_055730 16 7355 NP_001154803 16 7355 NP_001154802 16 7355 NP_061857 16 7355 NP_001242982 16 7355 NP_055840 16 7355 NP_005099 16 7355 XP_005269043 16 7355 XP_006719529 16 7355 XP_005269042 16 7355 XP_005269041 16 7355 XP_006717495 16 7355 XP_006717494 16 7355 XP_006717493 16 7355 XP_006717492 16 7355 XP_006717491 16 7355 XP_006717490 16 7355 XP_006717489 16 7355 XP_006717488 16 7355 XP_006717487 16 7355 XP_006717486 16 7355 XP_006713513 16 7355 XP_006713512 16 7355 XP_006713511 16 7355 XP_006711931 16 7355 XP_006711930 16 7355 XP_006711929 16 7355 XP_006711928 16 7355 XP_006711927 16 7355 XP_006711926 16 7355 XP_006711925 16 7355 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_004019 15 9605 NP_001641 15 9605 NP_573400 15 9605 NP_008981 15 9605 NP_006428 15 9605 NP_001161771 15 9605 NP_065928 15 9605 XP_006726633 15 9605 XP_006723752 15 9605 XP_006723751 15 9605 XP_006723750 15 9605 XP_006723749 15 9605 XP_006723748 15 9605 XP_005256527 15 9605 XP_006713311 15 9605 XP_006713310 15 9605 XP_005264819 15 9605 XP_006713309 15 9605 NP_631908 15 9605>NP_000042 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNLMQVEDQ 9 GNLM+VEDQ Sbjct: 844 GNLMEVEDQ 852>XP_005271621 Length = 2708 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNLMQVEDQ 9 GNLM+VEDQ Sbjct: 496 GNLMEVEDQ 504>XP_006718907 Length = 3050 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNLMQVEDQ 9 GNLM+VEDQ Sbjct: 844 GNLMEVEDQ 852>XP_006718906 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNLMQVEDQ 9 GNLM+VEDQ Sbjct: 844 GNLMEVEDQ 852>XP_005271619 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNLMQVEDQ 9 GNLM+VEDQ Sbjct: 844 GNLMEVEDQ 852>XP_005271618 Length = 3056 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNLMQVEDQ 9 GNLM+VEDQ Sbjct: 844 GNLMEVEDQ 852>XP_005254442 Length = 3041 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G+LMQ ED Sbjct: 1476 GHLMQAED 1483>NP_002364 Length = 2803 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G+LMQ ED Sbjct: 1238 GHLMQAED 1245>NP_079455 Length = 1894 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL +VE Q Sbjct: 597 GNLTEVEGQ 605>NP_065076 Length = 1873 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 GNL+ VE++ Sbjct: 1354 GNLLTVEEE 1362>NP_056502 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 G+LM+ ED+ Sbjct: 651 GDLMKTEDE 659>NP_001276916 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 G+LM+ ED+ Sbjct: 654 GDLMKTEDE 662>XP_006723662 Length = 1920 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 GNL+ VE++ Sbjct: 1401 GNLLTVEEE 1409>XP_005260825 Length = 1923 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 GNL+ VE++ Sbjct: 1354 GNLLTVEEE 1362>XP_006723661 Length = 1970 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 GNL+ VE++ Sbjct: 1401 GNLLTVEEE 1409>XP_005248772 Length = 1154 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 G+LM+ ED+ Sbjct: 651 GDLMKTEDE 659>XP_005248771 Length = 1177 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 G+LM+ ED+ Sbjct: 651 GDLMKTEDE 659>XP_005248770 Length = 1213 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 G+LM+ ED+ Sbjct: 651 GDLMKTEDE 659>XP_005273222 Length = 1823 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL +VE Q Sbjct: 612 GNLTEVEGQ 620>XP_006711450 Length = 1952 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL +VE Q Sbjct: 612 GNLTEVEGQ 620>XP_005273221 Length = 1974 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL +VE Q Sbjct: 612 GNLTEVEGQ 620>NP_055730 Length = 1710 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 642 GGLLQVDD 649>NP_001154803 Length = 703 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 593 GSLLQVEE 600>NP_001154802 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 582 GSLLQVEE 589>NP_061857 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 582 GSLLQVEE 589>NP_001242982 Length = 1709 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 641 GGLLQVDD 648>NP_055840 Length = 1184 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>NP_005099 Length = 536 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NL+Q++D+ Sbjct: 220 NLLQIQDK 227>XP_005269043 Length = 737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 270 GSLLQVEE 277>XP_006719529 Length = 923 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 456 GSLLQVEE 463>XP_005269042 Length = 969 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 502 GSLLQVEE 509>XP_005269041 Length = 1049 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GNLMQVED 8 G+L+QVE+ Sbjct: 582 GSLLQVEE 589>XP_006717495 Length = 1037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 1004 GGLLQVDD 1011>XP_006717494 Length = 1571 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 503 GGLLQVDD 510>XP_006717493 Length = 1610 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 542 GGLLQVDD 549>XP_006717492 Length = 1635 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 1004 GGLLQVDD 1011>XP_006717491 Length = 1677 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 609 GGLLQVDD 616>XP_006717490 Length = 1791 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 723 GGLLQVDD 730>XP_006717489 Length = 1945 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 1004 GGLLQVDD 1011>XP_006717488 Length = 2031 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 1004 GGLLQVDD 1011>XP_006717487 Length = 2071 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 1003 GGLLQVDD 1010>XP_006717486 Length = 2072 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G L+QV+D Sbjct: 1004 GGLLQVDD 1011>XP_006713513 Length = 399 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NL+Q++D+ Sbjct: 83 NLLQIQDK 90>XP_006713512 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NL+Q++D+ Sbjct: 220 NLLQIQDK 227>XP_006713511 Length = 509 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NL+Q++D+ Sbjct: 193 NLLQIQDK 200>XP_006711931 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711930 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711929 Length = 1186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711928 Length = 1188 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711927 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711926 Length = 1207 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>XP_006711925 Length = 1209 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 NLMQVEDQ 9 NLM++E+Q Sbjct: 381 NLMRLEEQ 388>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMQVEDQ 9 L+QVED+ Sbjct: 1862 LLQVEDE 1868>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMQVEDQ 9 L+QVED+ Sbjct: 1855 LLQVEDE 1861>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMQVEDQ 9 L+QVED+ Sbjct: 1862 LLQVEDE 1868>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LMQVEDQ 9 L+QVED+ Sbjct: 1855 LLQVEDE 1861>NP_004019 Length = 301 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G+ M+VED Sbjct: 253 GSYMEVED 260>NP_001641 Length = 323 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 G+ M+VED Sbjct: 275 GSYMEVED 282>NP_573400 Length = 1460 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1144 NLVQTEEQ 1151>NP_008981 Length = 1441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1125 NLVQTEEQ 1132>NP_006428 Length = 1724 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNLMQVED 8 GNL+ +ED Sbjct: 618 GNLVPLED 625>NP_001161771 Length = 658 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GNLMQVEDQ 9 G+L++ EDQ Sbjct: 36 GSLVEEEDQ 44>NP_065928 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NLMQVED 8 NL+++ED Sbjct: 423 NLLEIED 429>XP_006726633 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GNLMQVED 8 GN Q+ED Sbjct: 12 GNTFQLED 19>XP_006723752 Length = 1387 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1071 NLVQTEEQ 1078>XP_006723751 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1111 NLVQTEEQ 1118>XP_006723750 Length = 1427 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1111 NLVQTEEQ 1118>XP_006723749 Length = 1428 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1112 NLVQTEEQ 1119>XP_006723748 Length = 1437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 NLMQVEDQ 9 NL+Q E+Q Sbjct: 1121 NLVQTEEQ 1128>XP_005256527 Length = 4427 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 NLMQVED 8 NL+++ED Sbjct: 423 NLLEIED 429>XP_006713311 Length = 939 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL + E+Q Sbjct: 272 GNLKRTEEQ 280>XP_006713310 Length = 1038 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL + E+Q Sbjct: 371 GNLKRTEEQ 379>XP_005264819 Length = 1128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL + E+Q Sbjct: 484 GNLKRTEEQ 492>XP_006713309 Length = 1151 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNLMQVEDQ 9 GNL + E+Q Sbjct: 484 GNLKRTEEQ 492>NP_631908 Length = 349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLMQV 6 GN+MQV Sbjct: 191 GNIMQV 196Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.308 0.129 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,352 Number of extensions: 1307 Number of successful extensions: 75 Number of sequences better than 10000.0: 75 Number of HSP's gapped: 75 Number of HSP's successfully gapped: 75 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |