Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_653284 18 1482 NP_775899 17 2528 NP_000537 17 3301 NP_001263689 17 3301 NP_001119584 17 3301 NP_001119586 17 3301 NP_001263625 17 3301 NP_001119590 17 3301 NP_001263690 17 3301 NP_001119585 17 3301 NP_001263624 17 3301 NP_001119588 17 3301 NP_001119587 17 3301 NP_001119589 17 3301 NP_001263627 17 3301 NP_001263628 17 3301 NP_001263626 17 3301 NP_055737 17 4312 NP_001028225 17 4312 NP_127497 17 4312 NP_127500 17 4312 NP_127499 17 4312 NP_001271169 17 4312 NP_001271170 17 4312 NP_061872 17 4312 NP_001363 17 4312 NP_963840 17 4312 XP_006721528 17 4312 XP_005269963 17 4312 XP_005269962 17 4312 NP_065881 16 7355 NP_001072 16 7355 NP_001265542 16 7355 NP_036555 16 7355 XP_005268511 16 7355 XP_005268509 16 7355 NP_000024 15 9605 NP_008835 15 9605 NP_001075109 15 9605 NP_001188386 15 9605 NP_938207 15 9605 NP_112562 15 9605 NP_057613 15 9605 NP_055079 15 9605 NP_001177728 15 9605 NP_001138412 15 9605 NP_001138411 15 9605 NP_872372 15 9605 NP_057263 15 9605 NP_001034977 15 9605 NP_001129430 15 9605 NP_001129428 15 9605 NP_001129427 15 9605 NP_003297 15 9605 XP_006722041 15 9605 XP_005257576 15 9605 XP_006722040 15 9605 XP_006722039 15 9605 XP_005257575 15 9605 XP_006719898 15 9605 XP_006719897 15 9605 XP_006719896 15 9605 XP_006719895 15 9605 XP_005266476 15 9605 XP_006718491 15 9605 XP_005273791 15 9605 XP_005273790 15 9605 XP_005262758 15 9605 XP_005277448 15 9605 XP_006711342 15 9605 NP_001013373 15 9605 NP_001129429 15 9605>NP_653284 Length = 377 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 GNL GRTA+ Sbjct: 32 GNLRGRTAV 40>NP_775899 Length = 4462 Score = 17.3 bits (33), Expect = 2528 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GNLLGRTAL 9 GN LG TAL Sbjct: 3608 GNFLGDTAL 3616>NP_000537 Length = 393 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 262 GNLLGRNS 269>NP_001263689 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 223 GNLLGRNS 230>NP_001119584 Length = 393 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 262 GNLLGRNS 269>NP_001119586 Length = 341 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 262 GNLLGRNS 269>NP_001263625 Length = 302 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 223 GNLLGRNS 230>NP_001119590 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 223 GNLLGRNS 230>NP_001263690 Length = 354 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 223 GNLLGRNS 230>NP_001119585 Length = 346 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 262 GNLLGRNS 269>NP_001263624 Length = 307 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 223 GNLLGRNS 230>NP_001119588 Length = 209 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 130 GNLLGRNS 137>NP_001119587 Length = 261 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 130 GNLLGRNS 137>NP_001119589 Length = 214 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 130 GNLLGRNS 137>NP_001263627 Length = 182 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 103 GNLLGRNS 110>NP_001263628 Length = 187 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 103 GNLLGRNS 110>NP_001263626 Length = 234 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 GNLLGR + Sbjct: 103 GNLLGRNS 110>NP_055737 Length = 1429 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G+LLG+T L Sbjct: 441 GSLLGKTIL 449>NP_001028225 Length = 1375 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G+LLG+T L Sbjct: 441 GSLLGKTIL 449>NP_127497 Length = 1473 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G+LLG+T L Sbjct: 441 GSLLGKTIL 449>NP_127500 Length = 1399 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G+LLG+T L Sbjct: 441 GSLLGKTIL 449>NP_127499 Length = 1443 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G+LLG+T L Sbjct: 441 GSLLGKTIL 449>NP_001271169 Length = 1047 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 G LLGRT+ Sbjct: 155 GTLLGRTS 162>NP_001271170 Length = 567 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 G LLGRT+ Sbjct: 155 GTLLGRTS 162>NP_061872 Length = 834 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 G LLGRT+ Sbjct: 155 GTLLGRTS 162>NP_001363 Length = 4486 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNLLGRTAL 9 GN LG T L Sbjct: 3632 GNFLGETVL 3640>NP_963840 Length = 449 Score = 16.5 bits (31), Expect = 4312 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLGR Sbjct: 99 GNLLGR 104>XP_006721528 Length = 3869 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNLLGRTAL 9 GN LG T L Sbjct: 3632 GNFLGETVL 3640>XP_005269963 Length = 837 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 G LLGRT+ Sbjct: 155 GTLLGRTS 162>XP_005269962 Length = 850 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 G LLGRT+ Sbjct: 155 GTLLGRTS 162>NP_065881 Length = 410 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GN+LGR Sbjct: 146 GNMLGR 151>NP_001072 Length = 3623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GN+LGR Sbjct: 2404 GNILGR 2409>NP_001265542 Length = 1076 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G++LG TAL Sbjct: 12 GSVLGLTAL 20>NP_036555 Length = 203 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GNLLGRTA 8 G+LLGR A Sbjct: 13 GHLLGRLA 20>XP_005268511 Length = 1158 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G++LG TAL Sbjct: 40 GSVLGLTAL 48>XP_005268509 Length = 1281 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNLLGRTAL 9 G++LG TAL Sbjct: 40 GSVLGLTAL 48>NP_000024 Length = 745 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLLGRTAL 9 GN L RTA+ Sbjct: 12 GNTLKRTAV 20>NP_008835 Length = 4128 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NLLGRT 7 N+LGRT Sbjct: 4115 NILGRT 4120>NP_001075109 Length = 4097 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 NLLGRT 7 N+LGRT Sbjct: 4084 NILGRT 4089>NP_001188386 Length = 1497 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 53 NSLGQTAL 60>NP_938207 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 53 NSLGQTAL 60>NP_112562 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 53 NSLGQTAL 60>NP_057613 Length = 1188 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 751 GNLLGK 756>NP_055079 Length = 970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 15 GNLLGK 20>NP_001177728 Length = 938 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 15 GNLLGK 20>NP_001138412 Length = 102 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GNLLGRT 7 GN+LG T Sbjct: 89 GNVLGNT 95>NP_001138411 Length = 114 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GNLLGRT 7 GN+LG T Sbjct: 89 GNVLGNT 95>NP_872372 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GNLLGRT 7 GN+LG T Sbjct: 89 GNVLGNT 95>NP_057263 Length = 977 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 69 LGRTAL 74>NP_001034977 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 76 LGRTAL 81>NP_001129430 Length = 804 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 69 LGRTAL 74>NP_001129428 Length = 828 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 69 LGRTAL 74>NP_001129427 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 69 LGRTAL 74>NP_003297 Length = 982 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 69 LGRTAL 74>XP_006722041 Length = 1445 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_005257576 Length = 1454 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_006722040 Length = 1466 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_006722039 Length = 1491 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 53 NSLGQTAL 60>XP_005257575 Length = 1494 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 N LG+TAL Sbjct: 56 NSLGQTAL 63>XP_006719898 Length = 763 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 711 GNLLGK 716>XP_006719897 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 711 GNLLGK 716>XP_006719896 Length = 1005 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 568 GNLLGK 573>XP_006719895 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 645 GNLLGK 650>XP_005266476 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 711 GNLLGK 716>XP_006718491 Length = 408 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLLGRTAL 9 G+LLGR L Sbjct: 395 GHLLGRPLL 403>XP_005273791 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLLGRTAL 9 G+LLGR L Sbjct: 428 GHLLGRPLL 436>XP_005273790 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNLLGRTAL 9 G+LLGR L Sbjct: 454 GHLLGRPLL 462>XP_005262758 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GNLLGR 6 GNLLG+ Sbjct: 15 GNLLGK 20>XP_005277448 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 76 LGRTAL 81>XP_006711342 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 76 LGRTAL 81>NP_001013373 Length = 316 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 NLLGRTAL 9 +LLG TAL Sbjct: 38 SLLGNTAL 45>NP_001129429 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 LGRTAL 9 LGRTAL Sbjct: 69 LGRTAL 74Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.144 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 457,100 Number of extensions: 663 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |