Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 21 229 NP_000170 21 229 NP_001268422 21 229 NP_001268423 21 229 XP_005264328 21 229 NP_004645 18 1482 NP_001034680 18 1482 NP_001034679 18 1482 XP_005272733 18 1482 XP_005272732 18 1482 NP_055527 17 2528 XP_006721170 17 2528 XP_006721169 17 2528 XP_005255780 17 2528 NP_689778 17 3301 NP_073622 16 5631 NP_060903 16 5631 NP_001140160 16 5631 NP_001059 16 5631 XP_006724360 16 5631 XP_006724359 16 5631 XP_005261762 16 5631 XP_005261761 16 5631 XP_005265484 16 5631 NP_942153 16 5631 NP_003025 16 7355 NP_055402 16 7355 NP_115553 16 7355 XP_005253527 16 7355 NP_001167535 15 9605 NP_005393 15 9605 NP_001167534 15 9605 NP_001167536 15 9605 NP_001167537 15 9605 NP_005912 15 9605 NP_056934 15 9605 NP_075598 15 9605 NP_075594 15 9605 NP_075593 15 9605 NP_001276980 15 9605 NP_001276979 15 9605 NP_001276981 15 9605 NP_037414 15 9605 NP_001041666 15 9605 NP_055068 15 9605 NP_001156750 15 9605 NP_001167538 15 9605 NP_001156751 15 9605 NP_899068 15 9605 NP_055240 15 9605 XP_006724788 15 9605 XP_005251980 15 9605 XP_006715826 15 9605 XP_006715825 15 9605>NP_001268421 Length = 1230 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNGALKRKS 9 GNG+LKRKS Sbjct: 176 GNGSLKRKS 184>NP_000170 Length = 1360 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNGALKRKS 9 GNG+LKRKS Sbjct: 306 GNGSLKRKS 314>NP_001268422 Length = 1058 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNGALKRKS 9 GNG+LKRKS Sbjct: 4 GNGSLKRKS 12>NP_001268423 Length = 1058 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNGALKRKS 9 GNG+LKRKS Sbjct: 4 GNGSLKRKS 12>XP_005264328 Length = 1261 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GNGALKRKS 9 GNG+LKRKS Sbjct: 207 GNGSLKRKS 215>NP_004645 Length = 2555 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG LKRK Sbjct: 2408 GNGDLKRK 2415>NP_001034680 Length = 2554 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG LKRK Sbjct: 2407 GNGDLKRK 2414>NP_001034679 Length = 2570 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG LKRK Sbjct: 2407 GNGDLKRK 2414>XP_005272733 Length = 2559 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG LKRK Sbjct: 2412 GNGDLKRK 2419>XP_005272732 Length = 2575 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG LKRK Sbjct: 2412 GNGDLKRK 2419>NP_055527 Length = 1707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNGALKRKS 9 G GAL+R+S Sbjct: 1385 GEGALRRRS 1393>XP_006721170 Length = 1707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNGALKRKS 9 G GAL+R+S Sbjct: 1385 GEGALRRRS 1393>XP_006721169 Length = 1707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNGALKRKS 9 G GAL+R+S Sbjct: 1385 GEGALRRRS 1393>XP_005255780 Length = 1707 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GNGALKRKS 9 G GAL+R+S Sbjct: 1385 GEGALRRRS 1393>NP_689778 Length = 350 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 NGALKRKS 9 NGAL++KS Sbjct: 114 NGALQKKS 121>NP_073622 Length = 1501 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG L+R+ Sbjct: 863 GNGILRRR 870>NP_060903 Length = 1321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GALKRKS 9 GA+KRKS Sbjct: 258 GAVKRKS 264>NP_001140160 Length = 1321 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GALKRKS 9 GA+KRKS Sbjct: 258 GAVKRKS 264>NP_001059 Length = 1621 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNGALKRKS 9 G GA KRK+ Sbjct: 1536 GRGAKKRKA 1544>XP_006724360 Length = 885 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG L+R+ Sbjct: 161 GNGILRRR 168>XP_006724359 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG L+R+ Sbjct: 863 GNGILRRR 870>XP_005261762 Length = 1481 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG L+R+ Sbjct: 757 GNGILRRR 764>XP_005261761 Length = 1587 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG L+R+ Sbjct: 863 GNGILRRR 870>XP_005265484 Length = 1626 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GNGALKRKS 9 G GA KRK+ Sbjct: 1541 GRGAKKRKA 1549>NP_942153 Length = 1349 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GNGALKRK 8 GNG L+R+ Sbjct: 711 GNGILRRR 718>NP_003025 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNGALKRKS 9 GNG + +KS Sbjct: 142 GNGGILKKS 150>NP_055402 Length = 446 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GNGALKRK 8 G GALK K Sbjct: 92 GGGALKAK 99>NP_115553 Length = 394 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GNGALKRK 8 G G LKRK Sbjct: 193 GQGHLKRK 200>XP_005253527 Length = 205 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GNGALKRKS 9 GNG + +KS Sbjct: 142 GNGGILKKS 150>NP_001167535 Length = 812 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 806 NGGLKRR 812>NP_005393 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG KRKS Sbjct: 187 NGKKKRKS 194>NP_001167534 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 814 NGGLKRR 820>NP_001167536 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 814 NGGLKRR 820>NP_001167537 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 727 NGGLKRR 733>NP_005912 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNGALKRKS 9 G GALK S Sbjct: 27 GGGALKASS 35>NP_056934 Length = 820 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 814 NGGLKRR 820>NP_075598 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 816 NGGLKRR 822>NP_075594 Length = 731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 725 NGGLKRR 731>NP_075593 Length = 733 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 727 NGGLKRR 733>NP_001276980 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNGALKRKS 9 G G KRKS Sbjct: 643 GKGKWKRKS 651>NP_001276979 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNGALKRKS 9 G G KRKS Sbjct: 643 GKGKWKRKS 651>NP_001276981 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNGALKRKS 9 G G KRKS Sbjct: 643 GKGKWKRKS 651>NP_037414 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNGALKRKS 9 G G KRKS Sbjct: 656 GKGKWKRKS 664>NP_001041666 Length = 793 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GNGALKRKS 9 G G KRKS Sbjct: 643 GKGKWKRKS 651>NP_055068 Length = 2725 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG LKR S Sbjct: 1615 NGVLKRVS 1622>NP_001156750 Length = 2732 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG LKR S Sbjct: 1622 NGVLKRVS 1629>NP_001167538 Length = 853 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 NGALKRK 8 NG LKR+ Sbjct: 847 NGGLKRR 853>NP_001156751 Length = 2731 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG LKR S Sbjct: 1621 NGVLKRVS 1628>NP_899068 Length = 895 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GNGALKRK 8 GN ALK K Sbjct: 36 GNSALKDK 43>NP_055240 Length = 1065 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GNGALKRK 8 GN ALK K Sbjct: 36 GNSALKDK 43>XP_006724788 Length = 2570 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG LKR S Sbjct: 1460 NGVLKRVS 1467>XP_005251980 Length = 1084 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GNGALKRK 8 GN ALK K Sbjct: 36 GNSALKDK 43>XP_006715826 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG KRKS Sbjct: 187 NGKKKRKS 194>XP_006715825 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 NGALKRKS 9 NG KRKS Sbjct: 187 NGKKKRKS 194Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.126 0.337 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 677,927 Number of extensions: 1308 Number of successful extensions: 54 Number of sequences better than 10000.0: 54 Number of HSP's gapped: 54 Number of HSP's successfully gapped: 54 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |