Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001261 22 79 XP_005271924 22 79 XP_005271923 22 79 NP_444507 18 1482 NP_001036037 18 1482 NP_001262 18 1482 XP_006724088 18 1482 NP_003325 17 2528 NP_695012 17 2528 XP_005272707 17 2528 XP_005272706 17 2528 XP_005272705 17 2528 XP_006716621 17 3301 XP_005250973 17 3301 XP_005250972 17 3301 XP_006716620 17 3301 XP_006716619 17 3301 NP_976324 17 3301 NP_001012985 17 4312 NP_003963 17 4312 XP_005270323 17 4312 XP_005270322 17 4312 XP_005263404 17 4312 XP_005263403 17 4312 XP_006714474 17 4312 XP_006714473 17 4312 XP_006714472 17 4312 XP_005263402 17 4312 XP_005263401 17 4312 XP_005263399 17 4312 XP_005263400 17 4312 XP_006714471 17 4312 XP_005263398 17 4312 NP_212132 16 5631 NP_001258929 16 5631 NP_001258930 16 5631 NP_001258928 16 5631 NP_001846 16 5631 NP_008855 16 5631 NP_001071634 16 5631 XP_006722075 16 5631 XP_006711059 16 5631 XP_005271350 16 5631 XP_005271349 16 5631 NP_055317 16 7355 NP_061990 16 7355 NP_689472 16 7355 NP_476503 16 7355 NP_000160 15 9605 NP_005492 15 9605 NP_002195 15 9605 NP_055928 15 9605 NP_001191742 15 9605 NP_002517 15 9605 NP_647479 15 9605 NP_758963 15 9605 NP_001164015 15 9605 NP_758872 15 9605 NP_065744 15 9605 NP_612642 15 9605 NP_001153318 15 9605 NP_001164014 15 9605 NP_002229 15 9605 XP_006722989 15 9605 XP_005259720 15 9605 XP_005257365 15 9605 XP_005256618 15 9605 XP_005256617 15 9605 NP_116257 15 9605>NP_001261 Length = 1710 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GMRKLDNYK 9 GM+KLDNYK Sbjct: 345 GMKKLDNYK 353>XP_005271924 Length = 1710 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GMRKLDNYK 9 GM+KLDNYK Sbjct: 345 GMKKLDNYK 353>XP_005271923 Length = 1798 Score = 22.3 bits (46), Expect = 79 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GMRKLDNYK 9 GM+KLDNYK Sbjct: 345 GMKKLDNYK 353>NP_444507 Length = 686 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MRKLDNY 8 +RKLDNY Sbjct: 582 LRKLDNY 588>NP_001036037 Length = 501 Score = 18.1 bits (35), Expect = 1482 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GMRKLDNYK 9 G++KL+N+K Sbjct: 334 GLKKLENFK 342>NP_001262 Length = 1828 Score = 18.1 bits (35), Expect = 1482 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GMRKLDNYK 9 G++KL+N+K Sbjct: 334 GLKKLENFK 342>XP_006724088 Length = 646 Score = 18.1 bits (35), Expect = 1482 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 MRKLDNY 8 +RKLDNY Sbjct: 542 LRKLDNY 548>NP_003325 Length = 1058 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 G R+LD+YK Sbjct: 915 GHRQLDSYK 923>NP_695012 Length = 1058 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 G R+LD+YK Sbjct: 915 GHRQLDSYK 923>XP_005272707 Length = 1058 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 G R+LD+YK Sbjct: 915 GHRQLDSYK 923>XP_005272706 Length = 1064 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 G R+LD+YK Sbjct: 921 GHRQLDSYK 929>XP_005272705 Length = 1109 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 G R+LD+YK Sbjct: 966 GHRQLDSYK 974>XP_006716621 Length = 1001 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MRKLDNYK 9 +R+LDN+K Sbjct: 534 LRQLDNFK 541>XP_005250973 Length = 1001 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MRKLDNYK 9 +R+LDN+K Sbjct: 534 LRQLDNFK 541>XP_005250972 Length = 1001 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MRKLDNYK 9 +R+LDN+K Sbjct: 534 LRQLDNFK 541>XP_006716620 Length = 1001 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MRKLDNYK 9 +R+LDN+K Sbjct: 534 LRQLDNFK 541>XP_006716619 Length = 1001 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MRKLDNYK 9 +R+LDN+K Sbjct: 534 LRQLDNFK 541>NP_976324 Length = 1001 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 MRKLDNYK 9 +R+LDN+K Sbjct: 534 LRQLDNFK 541>NP_001012985 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>NP_003963 Length = 1849 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKLDNYK 9 +KL+NYK Sbjct: 1251 KKLENYK 1257>XP_005270323 Length = 1519 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKLDNYK 9 +KL+NYK Sbjct: 921 KKLENYK 927>XP_005270322 Length = 1646 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 RKLDNYK 9 +KL+NYK Sbjct: 1048 KKLENYK 1054>XP_005263404 Length = 1308 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263403 Length = 1672 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714474 Length = 1674 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714473 Length = 1675 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714472 Length = 1706 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263402 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263401 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263399 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263400 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_006714471 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>XP_005263398 Length = 1707 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GMRKLDNY 8 G+RKL++Y Sbjct: 604 GIRKLEDY 611>NP_212132 Length = 2109 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 709 GMKWVDNHK 717>NP_001258929 Length = 2100 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 709 GMKWVDNHK 717>NP_001258930 Length = 2098 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 709 GMKWVDNHK 717>NP_001258928 Length = 2129 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 709 GMKWVDNHK 717>NP_001846 Length = 1388 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GMRKLDNY 8 G+R +DNY Sbjct: 1331 GVRLVDNY 1338>NP_008855 Length = 248 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MRKLDNYK 9 +RKLDN K Sbjct: 172 VRKLDNTK 179>NP_001071634 Length = 201 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MRKLDNYK 9 +RKLDN K Sbjct: 172 VRKLDNTK 179>XP_006722075 Length = 196 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MRKLDNYK 9 +RKLDN K Sbjct: 172 VRKLDNTK 179>XP_006711059 Length = 1517 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 95 GMKWVDNHK 103>XP_005271350 Length = 1854 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 709 GMKWVDNHK 717>XP_005271349 Length = 2131 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GMRKLDNYK 9 GM+ +DN+K Sbjct: 709 GMKWVDNHK 717>NP_055317 Length = 504 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 MRKLDNYK 9 +RKL N+K Sbjct: 421 LRKLKNFK 428>NP_061990 Length = 718 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MRKLDNY 8 +RK++NY Sbjct: 169 LRKMENY 175>NP_689472 Length = 1910 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KLDNYK 9 KLDN+K Sbjct: 948 KLDNFK 953>NP_476503 Length = 720 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 MRKLDNY 8 +RK++NY Sbjct: 169 LRKMENY 175>NP_000160 Length = 429 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GMRKLDNY 8 G+R+L NY Sbjct: 116 GIRQLANY 123>NP_005492 Length = 1066 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GMRKLDNY 8 G+R LD Y Sbjct: 587 GLRSLDAY 594>NP_002195 Length = 1051 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GMRKLDNY 8 G+R LD Y Sbjct: 587 GLRSLDAY 594>NP_055928 Length = 2961 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMRKLD 6 G+RKLD Sbjct: 1075 GLRKLD 1080>NP_001191742 Length = 524 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KLDNY 8 KLDNY Sbjct: 330 KLDNY 334>NP_002517 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 4 KLDNY 8 KLDNY Sbjct: 330 KLDNY 334>NP_647479 Length = 988 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RKLDNY 8 RKLD+Y Sbjct: 336 RKLDHY 341>NP_758963 Length = 611 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RKLDNY 8 RKLD+Y Sbjct: 336 RKLDHY 341>NP_001164015 Length = 288 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KLDNYK 9 KLD+YK Sbjct: 88 KLDHYK 93>NP_758872 Length = 989 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RKLDNY 8 RKLD+Y Sbjct: 366 RKLDHY 371>NP_065744 Length = 2113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 GMRKLDNY 8 GM K NY Sbjct: 1216 GMEKFTNY 1223>NP_612642 Length = 255 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KLDNYK 9 KLD+YK Sbjct: 88 KLDHYK 93>NP_001153318 Length = 451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RKLDNYK 9 +KLD YK Sbjct: 153 QKLDKYK 159>NP_001164014 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 KLDNYK 9 KLD+YK Sbjct: 88 KLDHYK 93>NP_002229 Length = 962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 RKLDNY 8 RKLD+Y Sbjct: 339 RKLDHY 344>XP_006722989 Length = 472 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RKLDNYK 9 +KLD YK Sbjct: 153 QKLDKYK 159>XP_005259720 Length = 501 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RKLDNYK 9 +KLD YK Sbjct: 153 QKLDKYK 159>XP_005257365 Length = 916 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GMRKLDNY 8 G+R LD Y Sbjct: 452 GLRSLDAY 459>XP_005256618 Length = 2962 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMRKLD 6 G+RKLD Sbjct: 1076 GLRKLD 1081>XP_005256617 Length = 2966 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMRKLD 6 G+RKLD Sbjct: 1076 GLRKLD 1081>NP_116257 Length = 471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 RKLDNYK 9 +KLD YK Sbjct: 153 QKLDKYK 159Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.140 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 563,660 Number of extensions: 875 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |