Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_000332 17 3301 NP_620177 17 4312 NP_000910 17 4312 NP_620121 17 4312 NP_620176 17 4312 NP_001170777 17 4312 NP_922932 17 4312 XP_006714703 17 4312 XP_006714702 17 4312 XP_006714701 17 4312 XP_006714700 17 4312 XP_006714699 17 4312 XP_006714698 17 4312 XP_006714697 17 4312 XP_006714696 17 4312 XP_006714695 17 4312 NP_848599 16 5631 NP_001257637 16 5631 NP_009174 16 5631 NP_001257638 16 5631 NP_001257636 16 5631 XP_006713081 16 5631 NP_000135 16 7355 NP_075053 16 7355 NP_001139732 16 7355 NP_001139731 16 7355 NP_001139730 16 7355 NP_079055 16 7355 XP_006721061 16 7355 XP_006719667 16 7355 XP_005269209 16 7355 XP_006714735 16 7355 XP_005248626 16 7355 XP_006710064 16 7355 NP_001275676 15 9605 NP_001135935 15 9605 NP_001354 15 9605 NP_660160 15 9605 NP_001186704 15 9605 NP_001264890 15 9605 NP_001295 15 9605 NP_001264891 15 9605 NP_005883 15 9605 NP_079143 15 9605 NP_001229588 15 9605 NP_003147 15 9605 XP_006722133 15 9605 XP_006722132 15 9605 XP_006722131 15 9605 XP_006722130 15 9605 XP_006722129 15 9605 XP_006722128 15 9605 XP_006722127 15 9605 XP_006722126 15 9605 XP_006722125 15 9605 XP_005248435 15 9605 XP_006714564 15 9605 XP_006714563 15 9605 XP_005248434 15 9605 XP_005248433 15 9605 NP_071387 15 9605 NP_036474 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MHDIIAAE 9 MHDIIAAE Sbjct: 1303 MHDIIAAE 1310>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 MHDIIAAE 9 MHDIIAAE Sbjct: 1303 MHDIIAAE 1310>NP_000332 Length = 685 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 GMHDI+ Sbjct: 356 GMHDIV 361>NP_620177 Length = 887 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>NP_000910 Length = 974 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>NP_620121 Length = 905 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>NP_620176 Length = 866 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 676 HDIVASE 682>NP_001170777 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>NP_922932 Length = 1117 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GMHDIIAAE 9 G+H +IA E Sbjct: 153 GLHGVIATE 161>XP_006714703 Length = 866 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 676 HDIVASE 682>XP_006714702 Length = 867 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 676 HDIVASE 682>XP_006714701 Length = 905 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>XP_006714700 Length = 906 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>XP_006714699 Length = 972 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>XP_006714698 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>XP_006714697 Length = 973 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>XP_006714696 Length = 974 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>XP_006714695 Length = 974 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 HDIIAAE 9 HDI+A+E Sbjct: 783 HDIVASE 789>NP_848599 Length = 3092 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MHDIIAA 8 +HD+IAA Sbjct: 1080 VHDVIAA 1086>NP_001257637 Length = 111 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GMHDIIAAE 9 G H ++AAE Sbjct: 75 GQHSLMAAE 83>NP_009174 Length = 262 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GMHDIIAAE 9 G H ++AAE Sbjct: 75 GQHSLMAAE 83>NP_001257638 Length = 203 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GMHDIIAAE 9 G H ++AAE Sbjct: 75 GQHSLMAAE 83>NP_001257636 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GMHDIIAAE 9 G H ++AAE Sbjct: 75 GQHSLMAAE 83>XP_006713081 Length = 3964 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 MHDIIAA 8 +HD+IAA Sbjct: 1103 VHDVIAA 1109>NP_000135 Length = 210 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 MHDIIAAE 9 +H+++AAE Sbjct: 182 LHELLAAE 189>NP_075053 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GMHDIIA 7 G HD++A Sbjct: 741 GFHDVLA 747>NP_001139732 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDII Sbjct: 238 GIHDII 243>NP_001139731 Length = 403 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDII Sbjct: 268 GIHDII 273>NP_001139730 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDII Sbjct: 286 GIHDII 291>NP_079055 Length = 421 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDII Sbjct: 286 GIHDII 291>XP_006721061 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDI+ Sbjct: 676 GLHDIV 681>XP_006719667 Length = 251 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDII Sbjct: 116 GIHDII 121>XP_005269209 Length = 408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDII Sbjct: 273 GIHDII 278>XP_006714735 Length = 722 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GMHDIIA 7 G HD++A Sbjct: 698 GFHDVLA 704>XP_005248626 Length = 724 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GMHDIIA 7 G HD++A Sbjct: 700 GFHDVLA 706>XP_006710064 Length = 688 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GMHDII 6 G+HDI+ Sbjct: 676 GLHDIV 681>NP_001275676 Length = 420 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 MHD++ A+ Sbjct: 263 MHDVLDAQ 270>NP_001135935 Length = 509 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 MHD++ A+ Sbjct: 263 MHDVLDAQ 270>NP_001354 Length = 514 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 MHD++ A+ Sbjct: 263 MHDVLDAQ 270>NP_660160 Length = 330 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GMHDIIA 7 GMH IIA Sbjct: 67 GMHVIIA 73>NP_001186704 Length = 1133 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GMHDIIA 7 G+H+IIA Sbjct: 1008 GVHNIIA 1014>NP_001264890 Length = 791 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GMHDIIAA 8 G+H ++AA Sbjct: 446 GIHSLVAA 453>NP_001295 Length = 1380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GMHDIIA 7 G+H+IIA Sbjct: 1255 GVHNIIA 1261>NP_001264891 Length = 540 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GMHDIIAA 8 G+H ++AA Sbjct: 446 GIHSLVAA 453>NP_005883 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 284 GGHDIILA 291>NP_079143 Length = 1822 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 M+DIIA E Sbjct: 795 MNDIIAEE 802>NP_001229588 Length = 226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 GM DI+ A Sbjct: 179 GMQDIVVA 186>NP_003147 Length = 685 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GMHDIIAA 8 G+H ++AA Sbjct: 446 GIHSLVAA 453>XP_006722133 Length = 1104 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 284 GGHDIILA 291>XP_006722132 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 290 GGHDIILA 297>XP_006722131 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 284 GGHDIILA 291>XP_006722130 Length = 1106 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 290 GGHDIILA 297>XP_006722129 Length = 1110 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 290 GGHDIILA 297>XP_006722128 Length = 1148 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 274 GGHDIILA 281>XP_006722127 Length = 1154 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 280 GGHDIILA 287>XP_006722126 Length = 1158 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 284 GGHDIILA 291>XP_006722125 Length = 1164 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GMHDIIAA 8 G HDII A Sbjct: 290 GGHDIILA 297>XP_005248435 Length = 972 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 M+DIIA E Sbjct: 795 MNDIIAEE 802>XP_006714564 Length = 1537 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 M+DIIA E Sbjct: 795 MNDIIAEE 802>XP_006714563 Length = 1766 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 M+DIIA E Sbjct: 738 MNDIIAEE 745>XP_005248434 Length = 1818 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 M+DIIA E Sbjct: 790 MNDIIAEE 797>XP_005248433 Length = 1823 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 MHDIIAAE 9 M+DIIA E Sbjct: 795 MNDIIAEE 802>NP_071387 Length = 704 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GMHDIIA 7 G HD+I+ Sbjct: 78 GQHDVIS 84>NP_036474 Length = 260 Score = 15.4 bits (28), Expect = 9605 Identities = 3/7 (42%), Positives = 7/7 (100%) Query: 1 GMHDIIA 7 G+HD+++ Sbjct: 108 GLHDVLS 114Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.137 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 431,897 Number of extensions: 406 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |