Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005124 18 1482 NP_055726 18 1935 NP_001265105 17 3301 XP_005266918 17 4312 NP_689646 16 5631 NP_940841 16 5631 XP_006718830 16 5631 NP_001866 16 7355 NP_542410 16 7355 NP_542411 16 7355 NP_542412 16 7355 NP_055664 16 7355 NP_004925 16 7355 NP_001004339 16 7355 NP_001161139 16 7355 NP_001116105 16 7355 NP_689854 16 7355 NP_001269588 16 7355 NP_060414 16 7355 XP_006719336 16 7355 XP_006719335 16 7355 XP_005253054 16 7355 XP_006714500 16 7355 XP_006714499 16 7355 XP_006714498 16 7355 XP_005248285 16 7355 NP_001166896 15 9605 NP_056219 15 9605 NP_116228 15 9605 NP_005867 15 9605 XP_006717104 15 9605 XP_005251954 15 9605 XP_005251952 15 9605 XP_006712256 15 9605 XP_005246298 15 9605 XP_005246297 15 9605 XP_005246299 15 9605 XP_006712255 15 9605 XP_005246296 15 9605 XP_006712254 15 9605 XP_005246295 15 9605 XP_006712253 15 9605 XP_006712252 15 9605 XP_005246294 15 9605 XP_006712251 15 9605 XP_005246293 15 9605 XP_005246292 15 9605 XP_006712250 15 9605>NP_005124 Length = 329 Score = 18.1 bits (35), Expect = 1482 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GLRLLSVS 8 GLRLLSVS Sbjct: 8 GLRLLSVS 15>NP_055726 Length = 961 Score = 17.7 bits (34), Expect = 1935 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 GL LLSVSD Sbjct: 769 GLPLLSVSD 777>NP_001265105 Length = 768 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 GL+LLS SD Sbjct: 24 GLKLLSSSD 32>XP_005266918 Length = 1298 Score = 16.5 bits (31), Expect = 4312 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLRLLSV 7 GLRLLSV Sbjct: 855 GLRLLSV 861>NP_689646 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRLLSVSD 9 L+LLS+SD Sbjct: 155 LQLLSISD 162>NP_940841 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRLLSVSD 9 L+LLS+SD Sbjct: 155 LQLLSISD 162>XP_006718830 Length = 612 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 LRLLSVSD 9 L+LLS+SD Sbjct: 155 LQLLSISD 162>NP_001866 Length = 1500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLRLLSV 7 G+RLLSV Sbjct: 35 GIRLLSV 41>NP_542410 Length = 1629 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LRLLSVS 8 LRLLSVS Sbjct: 1533 LRLLSVS 1539>NP_542411 Length = 1736 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LRLLSVS 8 LRLLSVS Sbjct: 1640 LRLLSVS 1646>NP_542412 Length = 1650 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LRLLSVS 8 LRLLSVS Sbjct: 1554 LRLLSVS 1560>NP_055664 Length = 742 Score = 15.8 bits (29), Expect = 7355 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRL SVS Sbjct: 518 GLRLKSVS 525>NP_004925 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 G+R+L V+D Sbjct: 475 GIRVLDVND 483>NP_001004339 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLRLLSV 7 GLR+LSV Sbjct: 182 GLRILSV 188>NP_001161139 Length = 574 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 G+R+L V+D Sbjct: 475 GIRVLDVND 483>NP_001116105 Length = 1506 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GLRLLSV 7 G+RLLSV Sbjct: 41 GIRLLSV 47>NP_689854 Length = 1835 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLRLLSVSD 9 G+R++++SD Sbjct: 1535 GVRIVTISD 1543>NP_001269588 Length = 1355 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LRLLSVS 8 LRLLSVS Sbjct: 751 LRLLSVS 757>NP_060414 Length = 1287 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LRLLSVS 8 LRLLSVS Sbjct: 683 LRLLSVS 689>XP_006719336 Length = 1779 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLRLLSVSD 9 G+R++++SD Sbjct: 1479 GVRIVTISD 1487>XP_006719335 Length = 1793 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLRLLSVSD 9 G+R++++SD Sbjct: 1535 GVRIVTISD 1543>XP_005253054 Length = 1375 Score = 15.8 bits (29), Expect = 7355 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 2 LRLLSVS 8 LRLLSVS Sbjct: 771 LRLLSVS 777>XP_006714500 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 G+R+L V+D Sbjct: 475 GIRVLDVND 483>XP_006714499 Length = 575 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 G+R+L V+D Sbjct: 475 GIRVLDVND 483>XP_006714498 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 G+R+L V+D Sbjct: 475 GIRVLDVND 483>XP_005248285 Length = 790 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLRLLSVSD 9 G+R+L V+D Sbjct: 475 GIRVLDVND 483>NP_001166896 Length = 906 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS + Sbjct: 31 GLRLLSAN 38>NP_056219 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS + Sbjct: 31 GLRLLSAN 38>NP_116228 Length = 478 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLRLLSVSD 9 GLR + +SD Sbjct: 132 GLRCIPISD 140>NP_005867 Length = 3267 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2348 GLRLLSRS 2355>XP_006717104 Length = 574 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS + Sbjct: 31 GLRLLSAN 38>XP_005251954 Length = 686 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS + Sbjct: 31 GLRLLSAN 38>XP_005251952 Length = 907 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS + Sbjct: 31 GLRLLSAN 38>XP_006712256 Length = 2418 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 1499 GLRLLSRS 1506>XP_005246298 Length = 2418 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 1499 GLRLLSRS 1506>XP_005246297 Length = 2418 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 1499 GLRLLSRS 1506>XP_005246299 Length = 2480 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 1561 GLRLLSRS 1568>XP_006712255 Length = 2622 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2348 GLRLLSRS 2355>XP_005246296 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 1556 GLRLLSRS 1563>XP_006712254 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 1556 GLRLLSRS 1563>XP_005246295 Length = 3114 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2195 GLRLLSRS 2202>XP_006712253 Length = 3117 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2198 GLRLLSRS 2205>XP_006712252 Length = 3163 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2244 GLRLLSRS 2251>XP_005246294 Length = 3173 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2254 GLRLLSRS 2261>XP_006712251 Length = 3176 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2257 GLRLLSRS 2264>XP_005246293 Length = 3206 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2287 GLRLLSRS 2294>XP_005246292 Length = 3208 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2289 GLRLLSRS 2296>XP_006712250 Length = 3248 Score = 15.4 bits (28), Expect = 9605 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLRLLSVS 8 GLRLLS S Sbjct: 2329 GLRLLSRS 2336Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.142 0.361 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 343,820 Number of extensions: 497 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |