Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005742 20 299 NP_671714 20 299 XP_006715890 20 299 XP_005250160 20 299 XP_005250159 20 299 NP_115991 18 1935 NP_001167558 17 3301 NP_858045 17 3301 NP_006525 17 3301 NP_001167559 17 3301 NP_001364 17 4312 XP_006711798 17 4312 NP_055785 16 5631 NP_001191443 16 5631 NP_001191446 16 5631 NP_001191445 16 5631 XP_005245027 16 5631 NP_001596 16 7355 NP_060236 16 7355 NP_001073312 16 7355 XP_006721216 16 7355 XP_006710775 16 7355 XP_005263536 16 7355 NP_001164263 15 9605 NP_653314 15 9605 NP_001164262 15 9605 NP_001164264 15 9605 NP_064627 15 9605 NP_055392 15 9605 NP_001230085 15 9605 NP_005670 15 9605 NP_647610 15 9605 NP_543023 15 9605 NP_542194 15 9605 NP_937816 15 9605 NP_067003 15 9605 NP_001181939 15 9605 NP_937817 15 9605 NP_001230089 15 9605 NP_001230088 15 9605 NP_001230087 15 9605 NP_001230086 15 9605 NP_612502 15 9605 NP_954650 15 9605 XP_005261530 15 9605 XP_006724279 15 9605 XP_006724278 15 9605 XP_006724277 15 9605 XP_006724276 15 9605 XP_006724275 15 9605 XP_005261529 15 9605 XP_006724274 15 9605 XP_006724273 15 9605 XP_005261528 15 9605 XP_005261527 15 9605 XP_006721392 15 9605 XP_006721391 15 9605 XP_005256284 15 9605 XP_006721390 15 9605 XP_006721389 15 9605 XP_005256283 15 9605 XP_006721388 15 9605 XP_006713327 15 9605 XP_006713325 15 9605 XP_006713324 15 9605 XP_005265385 15 9605 XP_005264219 15 9605 XP_005264218 15 9605 XP_006712016 15 9605>NP_005742 Length = 3907 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GLQN+MSQK Sbjct: 669 GLQNEMSQK 677>NP_671714 Length = 3899 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GLQN+MSQK Sbjct: 669 GLQNEMSQK 677>XP_006715890 Length = 3860 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GLQN+MSQK Sbjct: 669 GLQNEMSQK 677>XP_005250160 Length = 3939 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GLQN+MSQK Sbjct: 669 GLQNEMSQK 677>XP_005250159 Length = 3952 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GLQN+MSQK Sbjct: 669 GLQNEMSQK 677>NP_115991 Length = 543 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GLQN MSQ Sbjct: 359 GLQNTMSQ 366>NP_001167558 Length = 1423 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 G+ NKMSQ Sbjct: 761 GVDNKMSQ 768>NP_858045 Length = 1424 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 G+ NKMSQ Sbjct: 761 GVDNKMSQ 768>NP_006525 Length = 1420 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 G+ NKMSQ Sbjct: 761 GVDNKMSQ 768>NP_001167559 Length = 1415 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 G+ NKMSQ Sbjct: 771 GVDNKMSQ 778>NP_001364 Length = 4515 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLQNKMSQK 9 GLQN SQK Sbjct: 1804 GLQNWSSQK 1812>XP_006711798 Length = 4586 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GLQNKMSQK 9 GLQN SQK Sbjct: 1826 GLQNWSSQK 1834>NP_055785 Length = 792 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GL+NKM Q Sbjct: 376 GLRNKMVQ 383>NP_001191443 Length = 714 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GL+NKM Q Sbjct: 298 GLRNKMVQ 305>NP_001191446 Length = 752 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GL+NKM Q Sbjct: 336 GLRNKMVQ 343>NP_001191445 Length = 748 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GL+NKM Q Sbjct: 332 GLRNKMVQ 339>XP_005245027 Length = 794 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GL+NKM Q Sbjct: 376 GLRNKMVQ 383>NP_001596 Length = 968 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQNKMS 7 LQNKMS Sbjct: 251 LQNKMS 256>NP_060236 Length = 1166 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LQNKMSQ 8 L NKMSQ Sbjct: 957 LMNKMSQ 963>NP_001073312 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LQNKMSQ 8 L NKMSQ Sbjct: 957 LMNKMSQ 963>XP_006721216 Length = 877 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LQNKMS 7 LQNKMS Sbjct: 251 LQNKMS 256>XP_006710775 Length = 1759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LQNKMSQ 8 L NKMSQ Sbjct: 957 LMNKMSQ 963>XP_005263536 Length = 1783 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LQNKMSQ 8 L NKMSQ Sbjct: 981 LMNKMSQ 987>NP_001164263 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 277 GLQNKIN 283>NP_653314 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 455 GLQNKIN 461>NP_001164262 Length = 410 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 277 GLQNKIN 283>NP_001164264 Length = 265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 132 GLQNKIN 138>NP_064627 Length = 1388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 LQ+K++QK Sbjct: 1103 LQHKLNQK 1110>NP_055392 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 751 LRNKLSQQ 758>NP_001230085 Length = 843 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 686 GLEDKLSER 694>NP_005670 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 712 GLEDKLSER 720>NP_647610 Length = 775 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 618 GLEDKLSER 626>NP_543023 Length = 664 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLQNKM 6 GLQNK+ Sbjct: 21 GLQNKL 26>NP_542194 Length = 1661 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLQNKMSQK 9 GLQ ++SQ+ Sbjct: 836 GLQEQLSQE 844Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQNKMSQ 8 LQN++SQ Sbjct: 1107 LQNRLSQ 1113>NP_937816 Length = 602 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLQNKMSQK 9 GL+N +S+K Sbjct: 539 GLRNAISEK 547>NP_067003 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLQNKMSQK 9 GL+N +S+K Sbjct: 544 GLRNAISEK 552>NP_001181939 Length = 556 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLQNKMSQK 9 GL+N +S+K Sbjct: 493 GLRNAISEK 501>NP_937817 Length = 626 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLQNKMSQK 9 GL+N +S+K Sbjct: 539 GLRNAISEK 547>NP_001230089 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 235 GLEDKLSER 243>NP_001230088 Length = 460 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 303 GLEDKLSER 311>NP_001230087 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 380 GLEDKLSER 388>NP_001230086 Length = 537 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 380 GLEDKLSER 388>NP_612502 Length = 97 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLQNKMSQ 8 GL+ K+SQ Sbjct: 17 GLEEKLSQ 24>NP_954650 Length = 1016 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLQNKMSQK 9 GLQ ++SQ+ Sbjct: 598 GLQEQLSQE 606Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LQNKMSQ 8 LQN++SQ Sbjct: 869 LQNRLSQ 875>XP_005261530 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 346 LRNKLSQQ 353>XP_006724279 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 364 LRNKLSQQ 371>XP_006724278 Length = 978 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 788 LRNKLSQQ 795>XP_006724277 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 788 LRNKLSQQ 795>XP_006724276 Length = 1058 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 751 LRNKLSQQ 758>XP_006724275 Length = 1060 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 788 LRNKLSQQ 795>XP_005261529 Length = 1095 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 788 LRNKLSQQ 795>XP_006724274 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 751 LRNKLSQQ 758>XP_006724273 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 751 LRNKLSQQ 758>XP_005261528 Length = 1189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 751 LRNKLSQQ 758>XP_005261527 Length = 1226 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 L+NK+SQ+ Sbjct: 788 LRNKLSQQ 795>XP_006721392 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 587 GLEDKLSER 595>XP_006721391 Length = 744 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 587 GLEDKLSER 595>XP_005256284 Length = 802 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 645 GLEDKLSER 653>XP_006721390 Length = 824 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 667 GLEDKLSER 675>XP_006721389 Length = 844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 687 GLEDKLSER 695>XP_005256283 Length = 869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 712 GLEDKLSER 720>XP_006721388 Length = 870 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GLQNKMSQK 9 GL++K+S++ Sbjct: 713 GLEDKLSER 721>XP_006713327 Length = 1023 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 LQ+K++QK Sbjct: 738 LQHKLNQK 745>XP_006713325 Length = 1195 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 LQ+K++QK Sbjct: 1103 LQHKLNQK 1110>XP_006713324 Length = 1285 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 LQ+K++QK Sbjct: 1103 LQHKLNQK 1110>XP_005265385 Length = 1291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LQNKMSQK 9 LQ+K++QK Sbjct: 1006 LQHKLNQK 1013>XP_005264219 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 132 GLQNKIN 138>XP_005264218 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 277 GLQNKIN 283>XP_006712016 Length = 593 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLQNKMS 7 GLQNK++ Sbjct: 455 GLQNKIN 461Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.301 0.115 0.286 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 418,308 Number of extensions: 696 Number of successful extensions: 71 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |