Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 19 665 NP_001091680 19 665 NP_001091679 19 665 XP_006713048 19 665 XP_005264943 19 665 XP_006713047 18 1935 XP_006713046 18 1935 NP_056508 17 4312 XP_005258482 16 5631 NP_036231 16 5631 NP_001264352 16 7355 XP_006724786 16 7355 XP_005258069 16 7355 XP_006710322 16 7355 NP_742093 15 9605 NP_001269238 15 9605 NP_001269239 15 9605 NP_473361 15 9605 NP_695000 15 9605 NP_001172035 15 9605 NP_001273191 15 9605 NP_689985 15 9605 NP_002749 15 9605 XP_005257574 15 9605 XP_006722038 15 9605 XP_005257572 15 9605 XP_005257573 15 9605 XP_005268826 15 9605 XP_006719386 15 9605 XP_005268825 15 9605 XP_005268823 15 9605 XP_005268824 15 9605>NP_001895 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LMELDMAM Sbjct: 7 LMELDMAM 14>NP_001091680 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LMELDMAM Sbjct: 7 LMELDMAM 14>NP_001091679 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LMELDMAM Sbjct: 7 LMELDMAM 14>XP_006713048 Length = 720 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LMELDMAM Sbjct: 7 LMELDMAM 14>XP_005264943 Length = 781 Score = 19.2 bits (38), Expect = 665 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LMELDMAM Sbjct: 7 LMELDMAM 14>XP_006713047 Length = 774 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MELDMAM 9 MELDMAM Sbjct: 1 MELDMAM 7>XP_006713046 Length = 774 Score = 17.7 bits (34), Expect = 1935 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 MELDMAM 9 MELDMAM Sbjct: 1 MELDMAM 7>NP_056508 Length = 942 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 MELDMAM 9 MELDMA+ Sbjct: 484 MELDMAL 490>XP_005258482 Length = 512 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLMELDMAM 9 G +E+DMA+ Sbjct: 197 GALEVDMAL 205>NP_036231 Length = 510 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLMELDMAM 9 G +E+DMA+ Sbjct: 195 GALEVDMAL 203>NP_001264352 Length = 407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLMELDM 7 GLM++DM Sbjct: 103 GLMKMDM 109>XP_006724786 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLMELDM 7 GLM++DM Sbjct: 198 GLMKMDM 204>XP_005258069 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GLMELDMA 8 GL++LD+A Sbjct: 39 GLLKLDLA 46>XP_006710322 Length = 657 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLMELDM 7 GLM++DM Sbjct: 267 GLMKMDM 273>NP_742093 Length = 530 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLMELD 6 GLME+D Sbjct: 480 GLMEMD 485>NP_001269238 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLMELD 6 GLME+D Sbjct: 478 GLMEMD 483>NP_001269239 Length = 534 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLMELD 6 GLME+D Sbjct: 484 GLMEMD 489>NP_473361 Length = 528 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLMELD 6 GLME+D Sbjct: 478 GLMEMD 483>NP_695000 Length = 304 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLMELD 6 GLME+D Sbjct: 142 GLMEID 147>NP_001172035 Length = 305 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLMELD 6 GLME+D Sbjct: 142 GLMEID 147>NP_001273191 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 220 LMQMDMA 226>NP_689985 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 220 LMQMDMA 226>NP_002749 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LM+LD++M Sbjct: 97 LMDLDISM 104>XP_005257574 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LM+LD++M Sbjct: 41 LMDLDISM 48>XP_006722038 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LM+LD++M Sbjct: 41 LMDLDISM 48>XP_005257572 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LM+LD++M Sbjct: 41 LMDLDISM 48>XP_005257573 Length = 278 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 LMELDMAM 9 LM+LD++M Sbjct: 41 LMDLDISM 48>XP_005268826 Length = 454 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 155 LMQMDMA 161>XP_006719386 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 220 LMQMDMA 226>XP_005268825 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 220 LMQMDMA 226>XP_005268823 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 220 LMQMDMA 226>XP_005268824 Length = 519 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LMELDMA 8 LM++DMA Sbjct: 220 LMQMDMA 226Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.329 0.139 0.368 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 422,640 Number of extensions: 533 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |