Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 21 229 NP_001075109 21 229 YP_003024032 18 1135 NP_003312 17 3301 NP_064593 17 3301 XP_005265293 17 3301 NP_071800 17 3301 NP_116586 16 5631 NP_060626 16 5631 NP_056193 16 5631 NP_000325 16 5631 NP_203752 16 5631 NP_001243040 16 5631 NP_001243035 16 5631 NP_004249 16 5631 NP_001243038 16 5631 NP_066934 16 5631 XP_005257623 16 5631 XP_006716942 16 5631 XP_006712877 16 5631 XP_006712876 16 5631 XP_006712875 16 5631 XP_006712874 16 5631 XP_006712873 16 5631 XP_006712872 16 5631 XP_005246976 16 5631 XP_005246975 16 5631 NP_008853 16 7355 NP_001035232 16 7355 NP_066287 16 7355 NP_001075145 16 7355 NP_001075146 16 7355 NP_001035233 16 7355 NP_001121696 16 7355 NP_001017395 16 7355 NP_055789 16 7355 NP_031375 16 7355 NP_006867 16 7355 NP_849144 16 7355 XP_005252486 16 7355 XP_005252485 16 7355 XP_005252484 16 7355 XP_005252483 16 7355 XP_005249598 16 7355 XP_005249596 16 7355 XP_005249594 16 7355 XP_005249593 16 7355 XP_006713662 16 7355 XP_006713661 16 7355 XP_006713660 16 7355 XP_005247434 16 7355 XP_006713659 16 7355 XP_006713617 16 7355 XP_006713616 16 7355 XP_006713615 16 7355 XP_006713614 16 7355 XP_006713613 16 7355 XP_006713612 16 7355 XP_006713611 16 7355 XP_006713610 16 7355 XP_006713609 16 7355 XP_006713608 16 7355 XP_006713607 16 7355 XP_006713606 16 7355 XP_006713605 16 7355 XP_006712742 16 7355 XP_005246812 16 7355 XP_005246811 16 7355 XP_005246810 16 7355 XP_005246808 16 7355 XP_005246807 16 7355 NP_060384 16 7355 NP_055945 15 9605 NP_001273113 15 9605 NP_055470 15 9605 NP_055858 15 9605 NP_942568 15 9605 XP_006711720 15 9605 NP_115679 15 9605>NP_008835 Length = 4128 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLLTNTMDM 9 GLLTNTMD+ Sbjct: 3996 GLLTNTMDV 4004>NP_001075109 Length = 4097 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLLTNTMDM 9 GLLTNTMD+ Sbjct: 3965 GLLTNTMDV 3973>YP_003024032 Length = 261 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 GLLTNT+ M Sbjct: 46 GLLTNTLTM 54>NP_003312 Length = 455 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 GL+TNT+ M Sbjct: 437 GLVTNTLAM 445>NP_064593 Length = 592 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 LLTNT D+ Sbjct: 316 LLTNTFDL 323>XP_005265293 Length = 547 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 LLTNT D+ Sbjct: 316 LLTNTFDL 323>NP_071800 Length = 555 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 LLTNT D+ Sbjct: 279 LLTNTFDL 286>NP_116586 Length = 1040 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1020 GLLTNT 1025>NP_060626 Length = 4363 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLTNTMD 8 LLTNT D Sbjct: 740 LLTNTQD 746>NP_056193 Length = 4388 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 LLTNTMD 8 LLTNT D Sbjct: 740 LLTNTQD 746>NP_000325 Length = 1836 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLLTNTM 7 GLL NTM Sbjct: 1770 GLLANTM 1776>NP_203752 Length = 1861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1751 GLLTNT 1756>NP_001243040 Length = 959 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTNT D+ Sbjct: 491 MLTNTFDL 498>NP_001243035 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTNT D+ Sbjct: 553 MLTNTFDL 560>NP_004249 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTNT D+ Sbjct: 553 MLTNTFDL 560>NP_001243038 Length = 1021 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTNT D+ Sbjct: 553 MLTNTFDL 560>NP_066934 Length = 971 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLLTNTMDM 9 GLL N M+M Sbjct: 564 GLLENCMEM 572>XP_005257623 Length = 1836 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLLTNTM 7 GLL NTM Sbjct: 1770 GLLANTM 1776>XP_006716942 Length = 843 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLLTNTMDM 9 GLL N M+M Sbjct: 436 GLLENCMEM 444>XP_006712877 Length = 1677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1567 GLLTNT 1572>XP_006712876 Length = 1783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1673 GLLTNT 1678>XP_006712875 Length = 1826 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1716 GLLTNT 1721>XP_006712874 Length = 1836 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1726 GLLTNT 1731>XP_006712873 Length = 1861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1751 GLLTNT 1756>XP_006712872 Length = 1861 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1751 GLLTNT 1756>XP_005246976 Length = 1864 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1754 GLLTNT 1759>XP_005246975 Length = 1871 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GLLTNT 6 GLLTNT Sbjct: 1761 GLLTNT 1766>NP_008853 Length = 2000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 711 ILTNTME 717>NP_001035232 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_066287 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_001075145 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 662 ILTNTME 668>NP_001075146 Length = 1951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 662 ILTNTME 668>NP_001035233 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_001121696 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 335 TNTLDM 340>NP_001017395 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>NP_055789 Length = 1556 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 G+LT+ M+M Sbjct: 551 GILTSVMNM 559>NP_031375 Length = 1069 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLLTNTMD 8 G+LT T+D Sbjct: 1055 GVLTQTLD 1062>NP_006867 Length = 415 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GLLTNTMD 8 GLL TMD Sbjct: 84 GLLKTTMD 91>NP_849144 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLTNTM 7 GL+TNT+ Sbjct: 1496 GLMTNTV 1502>XP_005252486 Length = 1407 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 G+LT+ M+M Sbjct: 392 GILTSVMNM 400>XP_005252485 Length = 1622 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 G+LT+ M+M Sbjct: 607 GILTSVMNM 615>XP_005252484 Length = 1566 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 G+LT+ M+M Sbjct: 551 GILTSVMNM 559>XP_005252483 Length = 1612 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLTNTMDM 9 G+LT+ M+M Sbjct: 607 GILTSVMNM 615>XP_005249598 Length = 1027 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLLTNTMD 8 G+LT T+D Sbjct: 1008 GVLTQTLD 1015>XP_005249596 Length = 1035 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLLTNTMD 8 G+LT T+D Sbjct: 1021 GVLTQTLD 1028>XP_005249594 Length = 1040 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLLTNTMD 8 G+LT T+D Sbjct: 1021 GVLTQTLD 1028>XP_005249593 Length = 1074 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GLLTNTMD 8 G+LT T+D Sbjct: 1055 GVLTQTLD 1062>XP_006713662 Length = 1846 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLTNTM 7 GL+TNT+ Sbjct: 1568 GLMTNTV 1574>XP_006713661 Length = 1860 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLTNTM 7 GL+TNT+ Sbjct: 1568 GLMTNTV 1574>XP_006713660 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLTNTM 7 GL+TNT+ Sbjct: 1496 GLMTNTV 1502>XP_005247434 Length = 2623 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLTNTM 7 GL+TNT+ Sbjct: 1496 GLMTNTV 1502>XP_006713659 Length = 2695 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLTNTM 7 GL+TNT+ Sbjct: 1568 GLMTNTV 1574>XP_006713617 Length = 463 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 259 TNTLDM 264>XP_006713616 Length = 470 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 266 TNTLDM 271>XP_006713615 Length = 480 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 276 TNTLDM 281>XP_006713614 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713613 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713612 Length = 539 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 335 TNTLDM 340>XP_006713611 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713610 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713609 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713608 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713607 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713606 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006713605 Length = 653 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 TNTMDM 9 TNT+DM Sbjct: 449 TNTLDM 454>XP_006712742 Length = 2000 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 711 ILTNTME 717>XP_005246812 Length = 1754 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 459 ILTNTME 465>XP_005246811 Length = 1995 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 700 ILTNTME 706>XP_005246810 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 710 ILTNTME 716>XP_005246808 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 710 ILTNTME 716>XP_005246807 Length = 2005 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 LLTNTMD 8 +LTNTM+ Sbjct: 710 ILTNTME 716>NP_060384 Length = 132 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GLLTNTMD 8 GLL NT D Sbjct: 104 GLLANTED 111>NP_055945 Length = 1266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLLTNTMDM 9 GLL T+D+ Sbjct: 44 GLLVGTLDV 52>NP_001273113 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTN MD+ Sbjct: 246 ILTNPMDV 253>NP_055470 Length = 314 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTN MD+ Sbjct: 238 ILTNPMDV 245>NP_055858 Length = 1233 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLLTNTMDM 9 GLL T+D+ Sbjct: 40 GLLVGTLDV 48>NP_942568 Length = 1250 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GLLTNTMDM 9 GLL T+D+ Sbjct: 40 GLLVGTLDV 48>XP_006711720 Length = 322 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLTNTMDM 9 +LTN MD+ Sbjct: 246 ILTNPMDV 253>NP_115679 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 LTNTMD 8 LTNT+D Sbjct: 107 LTNTLD 112Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.132 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 387,933 Number of extensions: 548 Number of successful extensions: 79 Number of sequences better than 10000.0: 79 Number of HSP's gapped: 79 Number of HSP's successfully gapped: 79 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |