Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 20 299 NP_859049 17 2528 NP_001269781 17 2528 NP_659449 17 2528 NP_001269782 17 2528 NP_001269783 17 2528 NP_001135772 17 2528 XP_005252445 17 2528 XP_006717455 17 2528 XP_005246400 17 2528 NP_689736 17 2528 NP_000005 17 4312 XP_006719119 17 4312 NP_001032 16 5631 NP_001099133 16 5631 NP_001230589 16 5631 NP_001230590 16 5631 NP_690867 16 5631 NP_001714 16 7355 NP_004659 16 7355 NP_057043 16 7355 NP_001268885 16 7355 NP_001075019 16 7355 NP_001167531 16 7355 NP_060254 16 7355 NP_001137484 16 7355 XP_006724836 16 7355 XP_005262507 16 7355 XP_006724835 16 7355 XP_006724834 16 7355 XP_006724833 16 7355 XP_006724832 16 7355 XP_006724831 16 7355 XP_006724830 16 7355 XP_005262504 16 7355 XP_006716232 16 7355 XP_006716231 16 7355 XP_005249383 16 7355 XP_005264901 16 7355 XP_005264900 16 7355 NP_001107578 15 9605 NP_001245271 15 9605 NP_001245269 15 9605 NP_689582 15 9605 NP_001245270 15 9605 NP_001245272 15 9605 NP_036467 15 9605 NP_073613 15 9605 NP_071918 15 9605 NP_036229 15 9605 XP_005272534 15 9605 XP_005272533 15 9605 XP_005272532 15 9605 XP_005254649 15 9605 XP_005254648 15 9605 XP_005270500 15 9605 XP_005270498 15 9605 XP_005270497 15 9605 NP_714922 15 9605>NP_004295 Length = 1620 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GLLQFNLNE 9 GLLQFNL+E Sbjct: 164 GLLQFNLSE 172>NP_859049 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 205 LLQFNIN 211>NP_001269781 Length = 316 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 234 LLQFNIN 240>NP_659449 Length = 341 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 259 LLQFNIN 265>NP_001269782 Length = 287 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 205 LLQFNIN 211>NP_001269783 Length = 208 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 126 LLQFNIN 132>NP_001135772 Length = 308 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 228 LLQFNIN 234>XP_005252445 Length = 294 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 212 LLQFNIN 218>XP_006717455 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 235 LLQFNIN 241>XP_005246400 Length = 359 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 279 LLQFNIN 285>NP_689736 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LLQFNLN 8 LLQFN+N Sbjct: 209 LLQFNIN 215>NP_000005 Length = 1474 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GLLQFNLN 8 GL+QF++N Sbjct: 403 GLVQFSIN 410>XP_006719119 Length = 1512 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GLLQFNLN 8 GL+QF++N Sbjct: 403 GLVQFSIN 410>NP_001032 Length = 1827 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQFNLNE 9 +QFNLN+ Sbjct: 1743 VQFNLNQ 1749>NP_001099133 Length = 238 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQFNLNE 9 +QFNLN+ Sbjct: 212 VQFNLND 218>NP_001230589 Length = 223 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQFNLNE 9 +QFNLN+ Sbjct: 197 VQFNLND 203>NP_001230590 Length = 185 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LQFNLNE 9 +QFNLN+ Sbjct: 159 VQFNLND 165>NP_690867 Length = 674 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLLQFNLN 8 GLLQF+ N Sbjct: 603 GLLQFDSN 610>NP_001714 Length = 2649 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQFNLNE 9 L FN+NE Sbjct: 2399 LHFNINE 2405>NP_004659 Length = 1857 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLQFNL 7 G+L+FNL Sbjct: 642 GVLEFNL 648>NP_057043 Length = 296 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QFNLNE 9 +FNLNE Sbjct: 254 EFNLNE 259>NP_001268885 Length = 3631 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QFNLNE 9 QFNLN+ Sbjct: 2812 QFNLND 2817>NP_001075019 Length = 1593 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>NP_001167531 Length = 700 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLQFNLNE 9 G+LQ+ +NE Sbjct: 103 GILQYFVNE 111>NP_060254 Length = 764 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLQFNLNE 9 G+LQ+ +NE Sbjct: 103 GILQYFVNE 111>NP_001137484 Length = 258 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 QFNLNE 9 +FNLNE Sbjct: 216 EFNLNE 221>XP_006724836 Length = 1582 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_005262507 Length = 1594 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724835 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724834 Length = 1615 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724833 Length = 1620 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724832 Length = 1640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724831 Length = 1640 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006724830 Length = 1642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_005262504 Length = 1642 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 LLQFNL 7 LLQFNL Sbjct: 273 LLQFNL 278>XP_006716232 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLQFNL 7 G+L+FNL Sbjct: 642 GVLEFNL 648>XP_006716231 Length = 2753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLLQFNL 7 G+L+FNL Sbjct: 642 GVLEFNL 648>XP_005249383 Length = 3186 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQFNLNE 9 L FN+NE Sbjct: 2936 LHFNINE 2942>XP_005264901 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLQFNLNE 9 G+LQ+ +NE Sbjct: 103 GILQYFVNE 111>XP_005264900 Length = 769 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLQFNLNE 9 G+LQ+ +NE Sbjct: 103 GILQYFVNE 111>NP_001107578 Length = 653 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 551 GLMAFNYN 558>NP_001245271 Length = 617 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 515 GLMAFNYN 522>NP_001245269 Length = 652 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 550 GLMAFNYN 557>NP_689582 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 503 GLMAFNYN 510>NP_001245270 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 518 GLMAFNYN 525>NP_001245272 Length = 585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 483 GLMAFNYN 490>NP_036467 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQFNLNE 9 L FN+NE Sbjct: 1060 LSFNVNE 1066>NP_073613 Length = 747 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLQFNLNE 9 GLL++ +NE Sbjct: 87 GLLEYFVNE 95>NP_071918 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GLLQFNLNE 9 GLL FN + Sbjct: 310 GLLDFNFEQ 318>NP_036229 Length = 179 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LLQFNLNE 9 L QF++NE Sbjct: 33 LYQFSMNE 40>XP_005272534 Length = 1071 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQFNLNE 9 L FN+NE Sbjct: 1033 LSFNVNE 1039>XP_005272533 Length = 1096 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQFNLNE 9 L FN+NE Sbjct: 1058 LSFNVNE 1064>XP_005272532 Length = 1100 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 LQFNLNE 9 L FN+NE Sbjct: 1062 LSFNVNE 1068>XP_005254649 Length = 1819 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GLLQFNLNE 9 GLL FN + Sbjct: 333 GLLDFNFEQ 341>XP_005254648 Length = 1906 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GLLQFNLNE 9 GLL FN + Sbjct: 333 GLLDFNFEQ 341>XP_005270500 Length = 573 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 471 GLMAFNYN 478>XP_005270498 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 503 GLMAFNYN 510>XP_005270497 Length = 621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GLLQFNLN 8 GL+ FN N Sbjct: 519 GLMAFNYN 526>NP_714922 Length = 309 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLLQFNLNE 9 G+L+F LN+ Sbjct: 6 GILKFFLNQ 14Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.320 0.146 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 481,664 Number of extensions: 828 Number of successful extensions: 59 Number of sequences better than 10000.0: 59 Number of HSP's gapped: 59 Number of HSP's successfully gapped: 59 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |