Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 18 1135 XP_006714104 18 1135 XP_005265800 18 1135 XP_006714103 18 1135 XP_006714102 18 1135 NP_066925 17 2528 NP_001159575 17 2528 NP_015628 17 3301 NP_619642 15 9605 NP_803884 15 9605 NP_004229 15 9605 NP_001271144 15 9605 NP_001271143 15 9605 NP_001271145 15 9605 NP_056076 15 9605 NP_001072980 15 9605 NP_071379 15 9605 XP_005260849 15 9605 XP_006721007 15 9605 XP_005255620 15 9605 XP_006712916 15 9605 XP_005247020 15 9605 XP_005247019 15 9605 XP_006712915 15 9605 XP_005247018 15 9605 XP_005247017 15 9605 XP_005247015 15 9605 XP_005247014 15 9605 XP_005247013 15 9605 XP_005247012 15 9605 XP_005247011 15 9605 NP_942093 15 9605>NP_006197 Length = 1089 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 GLFV VLEV Sbjct: 79 GLFVTVLEV 87>XP_006714104 Length = 832 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 GLFV VLEV Sbjct: 104 GLFVTVLEV 112>XP_005265800 Length = 1089 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 GLFV VLEV Sbjct: 79 GLFVTVLEV 87>XP_006714103 Length = 1111 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 GLFV VLEV Sbjct: 101 GLFVTVLEV 109>XP_006714102 Length = 1114 Score = 18.5 bits (36), Expect = 1135 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 GLFV VLEV Sbjct: 104 GLFVTVLEV 112>NP_066925 Length = 252 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLFVMVL 7 GLFVMVL Sbjct: 203 GLFVMVL 209>NP_001159575 Length = 195 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 1 GLFVMVL 7 GLFVMVL Sbjct: 146 GLFVMVL 152>NP_015628 Length = 1119 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 9/9 (100%) Query: 1 GLFVMVLEV 9 G+F+++LEV Sbjct: 857 GIFIVMLEV 865>NP_619642 Length = 841 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLFVMV 6 GLFVM+ Sbjct: 680 GLFVMI 685>NP_803884 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GLFVMV 6 GLFVM+ Sbjct: 426 GLFVMI 431>NP_004229 Length = 1992 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 666 GMFIMVVRM 674>NP_001271144 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 672 GMFIMVVRM 680>NP_001271143 Length = 2040 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>NP_001271145 Length = 1722 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 369 GMFIMVVRM 377>NP_056076 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 GL+ ++LEV Sbjct: 118 GLYFLLLEV 126>NP_001072980 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLFVMVL 7 G FVMVL Sbjct: 61 GCFVMVL 67>NP_071379 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVMVLE 8 FVMVLE Sbjct: 359 FVMVLE 364>XP_005260849 Length = 587 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVMVLE 8 FVMVLE Sbjct: 170 FVMVLE 175>XP_006721007 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLFVMVL 7 G FVMVL Sbjct: 61 GCFVMVL 67>XP_005255620 Length = 213 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLFVMVL 7 G FVMVL Sbjct: 61 GCFVMVL 67>XP_006712916 Length = 1998 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 672 GMFIMVVRM 680>XP_005247020 Length = 2013 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>XP_005247019 Length = 2025 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 672 GMFIMVVRM 680>XP_006712915 Length = 2026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 672 GMFIMVVRM 680>XP_005247018 Length = 2026 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 672 GMFIMVVRM 680>XP_005247017 Length = 2039 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 685 GMFIMVVRM 693>XP_005247015 Length = 2041 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>XP_005247014 Length = 2063 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>XP_005247013 Length = 2067 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>XP_005247012 Length = 2068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>XP_005247011 Length = 2068 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GLFVMVLEV 9 G+F+MV+ + Sbjct: 714 GMFIMVVRM 722>NP_942093 Length = 776 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 FVMVLE 8 FVMVLE Sbjct: 359 FVMVLE 364Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.342 0.161 0.433 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 269,627 Number of extensions: 268 Number of successful extensions: 32 Number of sequences better than 10000.0: 32 Number of HSP's gapped: 32 Number of HSP's successfully gapped: 32 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.5 bits) S2: 28 (15.4 bits)
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |