Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005219 19 665 NP_036221 17 4312 NP_078966 16 5631 XP_006723004 16 5631 NP_003730 16 7355 NP_001240837 16 7355 NP_995317 16 7355 NP_001345 16 7355 NP_055855 16 7355 NP_001809 16 7355 NP_004769 16 7355 NP_004568 16 7355 NP_001094891 16 7355 XP_006715824 16 7355 XP_005271834 16 7355 XP_005271833 16 7355 XP_005271832 16 7355 XP_005271831 16 7355 XP_006715823 16 7355 XP_005271830 16 7355 XP_006712425 16 7355 XP_006712424 16 7355 NP_001344 16 7355 NP_000206 15 9605 NP_783163 15 9605 NP_055099 15 9605 NP_001092284 15 9605 NP_001268366 15 9605 NP_001014839 15 9605 NP_775922 15 9605 NP_001013663 15 9605 NP_001268367 15 9605 NP_008933 15 9605 NP_065073 15 9605 XP_005276449 15 9605 XP_005260314 15 9605 XP_006722808 15 9605 XP_005259953 15 9605 XP_006715582 15 9605 NP_061755 15 9605 NP_001014841 15 9605>NP_005219 Length = 1210 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GLAKLLGVE 9 GLAKLLG E Sbjct: 857 GLAKLLGAE 865>NP_036221 Length = 738 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GLAKLLGV 8 GLA+LLG+ Sbjct: 85 GLARLLGL 92>NP_078966 Length = 14507 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLA LLGV Sbjct: 14459 GLAGLLGV 14466>XP_006723004 Length = 6443 Score = 16.2 bits (30), Expect = 5631 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLA LLGV Sbjct: 6395 GLAGLLGV 6402>NP_003730 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLAK +GV Sbjct: 158 GLAKSIGV 165>NP_001240837 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLAK +GV Sbjct: 158 GLAKSIGV 165>NP_995317 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLAK +GV Sbjct: 158 GLAKSIGV 165>NP_001345 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLAK +GV Sbjct: 158 GLAKSIGV 165>NP_055855 Length = 2098 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAKLLGV 8 LAK+LGV Sbjct: 1910 LAKILGV 1916>NP_001809 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLAK +GV Sbjct: 158 GLAKSIGV 165>NP_004769 Length = 395 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLA LLG+ Sbjct: 40 GLASLLGL 47>NP_004568 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>NP_001094891 Length = 1022 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAKLLGV 8 +AKLLGV Sbjct: 303 IAKLLGV 309>XP_006715824 Length = 180 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_005271834 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_005271833 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_005271832 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_005271831 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_006715823 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_005271830 Length = 225 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK+ GVE Sbjct: 34 LAKICGVE 41>XP_006712425 Length = 1349 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAKLLGV 8 LAK+LGV Sbjct: 1161 LAKILGV 1167>XP_006712424 Length = 1376 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 LAKLLGV 8 LAK+LGV Sbjct: 1188 LAKILGV 1194>NP_001344 Length = 323 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLAK +GV Sbjct: 158 GLAKSIGV 165>NP_000206 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GLAKLLGVE 9 GLAKLL ++ Sbjct: 969 GLAKLLPLD 977>NP_783163 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLAKLLG 7 GLA LLG Sbjct: 190 GLASLLG 196>NP_055099 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLAKLLG 7 GLA++LG Sbjct: 264 GLARILG 270>NP_001092284 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 L KL+G+E Sbjct: 170 LEKLIGIE 177>NP_001268366 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLAKLLG 7 GLA LLG Sbjct: 151 GLASLLG 157>NP_001014839 Length = 729 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLAKLLG 7 GLA++LG Sbjct: 264 GLARILG 270>NP_775922 Length = 6996 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAKL GV+ Sbjct: 1581 LAKLCGVD 1588>NP_001013663 Length = 343 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GLAKLLGV 8 GLA LLG+ Sbjct: 158 GLATLLGL 165>NP_001268367 Length = 368 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLAKLLG 7 GLA LLG Sbjct: 151 GLASLLG 157>NP_008933 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLAKLLG 7 GLA LLG Sbjct: 190 GLASLLG 196>NP_065073 Length = 2177 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLAKLLGVE 9 GLA +LG E Sbjct: 890 GLAFILGAE 898>XP_005276449 Length = 171 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLAKLLG 7 GLA++LG Sbjct: 60 GLARMLG 66>XP_005260314 Length = 407 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GLAKLLG 7 GLA LLG Sbjct: 190 GLASLLG 196>XP_006722808 Length = 1124 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GLAKLLGVE 9 GLAKLL ++ Sbjct: 969 GLAKLLPLD 977>XP_005259953 Length = 1167 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GLAKLLGVE 9 GLAKLL ++ Sbjct: 1012 GLAKLLPLD 1020>XP_006715582 Length = 2106 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GLAKLLGVE 9 GLA +LG E Sbjct: 819 GLAFILGAE 827>NP_061755 Length = 795 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 LAKLLGVE 9 LAK LG+E Sbjct: 48 LAKTLGLE 55>NP_001014841 Length = 712 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GLAKLLG 7 GLA++LG Sbjct: 247 GLARILG 253Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.316 0.147 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 442,723 Number of extensions: 911 Number of successful extensions: 41 Number of sequences better than 10000.0: 41 Number of HSP's gapped: 41 Number of HSP's successfully gapped: 41 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.5 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |