Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 390 NP_001075109 20 390 NP_000896 20 390 NP_001273752 18 1935 NP_001136105 18 1935 NP_055123 18 1935 NP_001238784 18 1935 NP_001238780 18 1935 NP_001238781 18 1935 NP_001238782 18 1935 XP_005256637 18 1935 XP_005256636 18 1935 NP_061156 17 4312 NP_955394 16 5631 NP_001230823 16 5631 NP_001230820 16 5631 NP_000370 16 5631 NP_001230824 16 5631 NP_955393 16 5631 NP_001230821 16 5631 NP_003279 16 5631 NP_955395 16 5631 NP_955392 16 5631 NP_955391 16 5631 NP_001094859 16 5631 NP_000929 16 5631 NP_998764 16 7355 NP_060552 16 7355 NP_001136121 16 7355 NP_001154180 16 7355 NP_004259 16 7355 XP_006719561 16 7355 XP_005252880 16 7355 XP_005252879 16 7355 XP_005252878 16 7355 XP_005252877 16 7355 XP_005266876 16 7355 XP_006715392 16 7355 XP_005266875 16 7355 XP_006714901 16 7355 XP_005248447 16 7355 XP_005248446 16 7355 NP_061063 16 7355 NP_001092878 16 7355 NP_061978 15 9605 NP_000833 15 9605 NP_001137303 15 9605 NP_149107 15 9605 NP_078948 15 9605 NP_002527 15 9605 NP_065868 15 9605 NP_940967 15 9605 XP_005268266 15 9605 XP_006720366 15 9605 XP_005268265 15 9605 XP_006718893 15 9605 XP_006718892 15 9605 XP_006718891 15 9605 XP_005263278 15 9605 XP_005263277 15 9605 XP_006713778 15 9605 XP_005273123 15 9605 XP_005273122 15 9605 NP_059974 15 9605>NP_008835 Length = 4128 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKKRLGLSG 9 GKKRLGL G Sbjct: 2701 GKKRLGLPG 2709>NP_001075109 Length = 4097 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKKRLGLSG 9 GKKRLGL G Sbjct: 2701 GKKRLGLPG 2709>NP_000896 Length = 97 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKKRLGLSG 9 G KRLGLSG Sbjct: 3 GNKRLGLSG 11>NP_001273752 Length = 246 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GKKRLGLSG 9 G++RLGL+G Sbjct: 231 GEERLGLAG 239>NP_001136105 Length = 880 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 712 GSKRLGIDG 720>NP_055123 Length = 880 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 712 GSKRLGIDG 720>NP_001238784 Length = 494 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 326 GSKRLGIDG 334>NP_001238780 Length = 494 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 326 GSKRLGIDG 334>NP_001238781 Length = 494 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 326 GSKRLGIDG 334>NP_001238782 Length = 494 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 326 GSKRLGIDG 334>XP_005256637 Length = 879 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 711 GSKRLGIDG 719>XP_005256636 Length = 880 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRLG+ G Sbjct: 712 GSKRLGIDG 720>NP_061156 Length = 434 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 KRLGLSG 9 KR+GLSG Sbjct: 382 KRVGLSG 388>NP_955394 Length = 220 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_001230823 Length = 152 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_001230820 Length = 181 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 53 KRRLGLS 59>NP_000370 Length = 1333 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KKRLGLSG 9 +++LGLSG Sbjct: 31 RRKLGLSG 38>NP_001230824 Length = 222 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_955393 Length = 209 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_001230821 Length = 163 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 55 KRRLGLS 61>NP_003279 Length = 206 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_955395 Length = 200 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_955392 Length = 229 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_955391 Length = 186 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 78 KRRLGLS 84>NP_001094859 Length = 229 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KKRLGLSG 9 K+RLGL G Sbjct: 115 KRRLGLLG 122>NP_000929 Length = 1174 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRL L+G Sbjct: 389 GNKRLDLAG 397>NP_998764 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKKRLGL 7 GKKR G+ Sbjct: 231 GKKRFGI 237>NP_060552 Length = 1133 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRL L+G Sbjct: 358 GNKRLELAG 366>NP_001136121 Length = 912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKKRLGL 7 GKKR G+ Sbjct: 230 GKKRFGI 236>NP_001154180 Length = 1075 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRL L+G Sbjct: 300 GNKRLELAG 308>NP_004259 Length = 651 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KR+ LSG Sbjct: 401 GHKRMRLSG 409>XP_006719561 Length = 875 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G KRL L+G Sbjct: 358 GNKRLELAG 366>XP_005252880 Length = 886 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKKRLGL 7 GKKR G+ Sbjct: 204 GKKRFGI 210>XP_005252879 Length = 887 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKKRLGL 7 GKKR G+ Sbjct: 205 GKKRFGI 211>XP_005252878 Length = 1072 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKKRLGL 7 GKKR G+ Sbjct: 390 GKKRFGI 396>XP_005252877 Length = 1073 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKKRLGL 7 GKKR G+ Sbjct: 391 GKKRFGI 397>XP_005266876 Length = 321 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKRLGL 7 KKRLGL Sbjct: 196 KKRLGL 201>XP_006715392 Length = 325 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKRLGL 7 KKRLGL Sbjct: 196 KKRLGL 201>XP_005266875 Length = 454 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKRLGL 7 KKRLGL Sbjct: 196 KKRLGL 201>XP_006714901 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 209 KERLGLS 215>XP_005248447 Length = 356 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 GK RL +SG Sbjct: 340 GKSRLPVSG 348>XP_005248446 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 GK RL +SG Sbjct: 370 GKSRLPVSG 378>NP_061063 Length = 515 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 KKRLGL 7 KKRLGL Sbjct: 196 KKRLGL 201>NP_001092878 Length = 242 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 K+RLGLS Sbjct: 209 KERLGLS 215>NP_061978 Length = 4242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKKRLG 6 G+KRLG Sbjct: 3426 GRKRLG 3431>NP_000833 Length = 1180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLGLSG 9 +RLGL+G Sbjct: 291 RRLGLAG 297>NP_001137303 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLGLSG 9 +RLGL+G Sbjct: 291 RRLGLAG 297>NP_149107 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 KKRLG++ Sbjct: 635 KKRLGIN 641>NP_078948 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 GK++LG G Sbjct: 568 GKQKLGFLG 576>NP_002527 Length = 688 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GKKRLGLS 8 GKK G+S Sbjct: 78 GKKNFGIS 85>NP_065868 Length = 936 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 KKR+GL+ Sbjct: 12 KKRMGLN 18>NP_940967 Length = 692 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 G +RL LSG Sbjct: 133 GLRRLDLSG 141>XP_005268266 Length = 873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 KKRLG++ Sbjct: 529 KKRLGIN 535>XP_006720366 Length = 971 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 KKRLG++ Sbjct: 647 KKRLGIN 653>XP_005268265 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 KKRLG++ Sbjct: 647 KKRLGIN 653>XP_006718893 Length = 1180 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLGLSG 9 +RLGL+G Sbjct: 291 RRLGLAG 297>XP_006718892 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLGLSG 9 +RLGL+G Sbjct: 291 RRLGLAG 297>XP_006718891 Length = 1212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 KRLGLSG 9 +RLGL+G Sbjct: 291 RRLGLAG 297>XP_005263278 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 GK++LG G Sbjct: 285 GKQKLGFLG 293>XP_005263277 Length = 759 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 GK++LG G Sbjct: 424 GKQKLGFLG 432>XP_006713778 Length = 923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 KKRLGLS 8 KKR+GL+ Sbjct: 12 KKRMGLN 18>XP_005273123 Length = 432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKKRLG 6 G+KRLG Sbjct: 28 GRKRLG 33>XP_005273122 Length = 464 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GKKRLG 6 G+KRLG Sbjct: 28 GRKRLG 33>NP_059974 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GKKRLGLSG 9 GKK + L+G Sbjct: 88 GKKSISLAG 96Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.311 0.144 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 645,579 Number of extensions: 1205 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.4 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |