Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 20 509 NP_001075109 20 509 NP_002763 18 1935 NP_859074 17 2528 XP_006716397 17 2528 XP_006716396 17 2528 XP_006716395 17 2528 XP_006716394 17 2528 XP_005273535 17 2528 XP_006716393 17 2528 XP_006716392 17 2528 XP_006716391 17 2528 XP_005273534 17 2528 NP_001129416 17 3301 NP_569830 17 3301 NP_569828 17 3301 NP_569827 17 3301 XP_005253262 17 3301 XP_005253261 17 3301 XP_005253260 17 3301 XP_006718426 17 3301 XP_005253258 17 3301 NP_001129415 17 3301 NP_001264044 17 4312 NP_689637 16 5631 NP_940895 16 5631 NP_057095 16 5631 NP_001019903 16 5631 XP_005245943 16 5631 XP_006710737 16 5631 XP_005245946 16 5631 XP_005245945 16 5631 XP_005245944 16 5631 XP_005245942 16 5631 NP_006083 16 7355 NP_060587 16 7355 NP_689966 16 7355 XP_005270021 16 7355 XP_005270020 16 7355 XP_005270019 16 7355 XP_005249633 16 7355 XP_006715700 16 7355 XP_006715699 16 7355 XP_005249632 16 7355 XP_005249631 16 7355 XP_005249630 16 7355 XP_006715698 16 7355 XP_006715697 16 7355 XP_005249629 16 7355 XP_006715696 16 7355 XP_005249625 16 7355 XP_005249005 16 7355 XP_005249004 16 7355 XP_005249003 16 7355 XP_005249000 16 7355 NP_067640 15 9605 NP_001123613 15 9605 NP_001106205 15 9605 NP_115883 15 9605 NP_001159484 15 9605 NP_065389 15 9605 NP_001275640 15 9605 XP_006722435 15 9605 XP_005258240 15 9605 XP_006722434 15 9605 XP_005247748 15 9605 XP_005247747 15 9605 XP_005263883 15 9605 NP_075054 15 9605>NP_008835 Length = 4128 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GKG SKLLR Sbjct: 3645 GKGGSKLLR 3653>NP_001075109 Length = 4097 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GKG SKLLR Sbjct: 3645 GKGGSKLLR 3653>NP_002763 Length = 1019 Score = 17.7 bits (34), Expect = 1935 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G GSSK+LR Sbjct: 285 GVGSSKILR 293>NP_859074 Length = 530 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_006716397 Length = 302 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_006716396 Length = 304 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_006716395 Length = 305 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_006716394 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_005273535 Length = 354 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 27 KGSSKLFR 34>XP_006716393 Length = 407 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_006716392 Length = 485 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_006716391 Length = 498 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>XP_005273534 Length = 517 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGSSKL R Sbjct: 203 KGSSKLFR 210>NP_001129416 Length = 1541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>NP_569830 Length = 1479 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>NP_569828 Length = 1545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>NP_569827 Length = 1565 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>XP_005253262 Length = 1479 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>XP_005253261 Length = 1541 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>XP_005253260 Length = 1545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>XP_006718426 Length = 1553 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>XP_005253258 Length = 1565 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>NP_001129415 Length = 1544 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G+G+ KLLR Sbjct: 759 GEGAQKLLR 767>NP_001264044 Length = 4516 Score = 16.5 bits (31), Expect = 4312 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKGSSKLLR 9 G G SK+LR Sbjct: 2177 GTGKSKILR 2185>NP_689637 Length = 1135 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GKGSSK 6 GKGSSK Sbjct: 82 GKGSSK 87>NP_940895 Length = 266 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS KLL+ Sbjct: 187 KGSGKLLK 194>NP_057095 Length = 373 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 266 GKSSTELLR 274>NP_001019903 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 190 GKSSTELLR 198>XP_005245943 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 190 GKSSTELLR 198>XP_006710737 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 190 GKSSTELLR 198>XP_005245946 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 190 GKSSTELLR 198>XP_005245945 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 190 GKSSTELLR 198>XP_005245944 Length = 297 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 190 GKSSTELLR 198>XP_005245942 Length = 401 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 GK S++LLR Sbjct: 294 GKSSTELLR 302>NP_006083 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>NP_060587 Length = 1224 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKGSSKLL 8 GKG+ KL+ Sbjct: 760 GKGNQKLI 767>NP_689966 Length = 993 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS K+LR Sbjct: 581 KGSLKMLR 588>XP_005270021 Length = 753 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKGSSKLL 8 GKG+ KL+ Sbjct: 289 GKGNQKLI 296>XP_005270020 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKGSSKLL 8 GKG+ KL+ Sbjct: 501 GKGNQKLI 508>XP_005270019 Length = 965 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GKGSSKLL 8 GKG+ KL+ Sbjct: 501 GKGNQKLI 508>XP_005249633 Length = 705 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 76 KGASKLL 82>XP_006715700 Length = 765 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_006715699 Length = 779 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_005249632 Length = 841 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_005249631 Length = 869 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_005249630 Length = 925 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_006715698 Length = 937 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_006715697 Length = 952 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_005249629 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_006715696 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_005249625 Length = 953 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 KGSSKLL 8 KG+SKLL Sbjct: 324 KGASKLL 330>XP_005249005 Length = 531 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS K+LR Sbjct: 119 KGSLKMLR 126>XP_005249004 Length = 955 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS K+LR Sbjct: 597 KGSLKMLR 604>XP_005249003 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS K+LR Sbjct: 575 KGSLKMLR 582>XP_005249000 Length = 1009 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS K+LR Sbjct: 597 KGSLKMLR 604>NP_067640 Length = 589 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKGSSKLLR 9 G GS+ LLR Sbjct: 332 GSGSNGLLR 340>NP_001123613 Length = 345 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKGSSKL 7 GKG SK+ Sbjct: 146 GKGGSKI 152>NP_001106205 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSSKLLR 9 +GSS+L+R Sbjct: 367 RGSSELIR 374>NP_115883 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS+ LLR Sbjct: 154 KGSNALLR 161>NP_001159484 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSSKLLR 9 +GSS+L+R Sbjct: 367 RGSSELIR 374>NP_065389 Length = 371 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GKGSSKL 7 GKG SK+ Sbjct: 146 GKGGSKI 152>NP_001275640 Length = 307 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSSKLLR 9 +GSS+L+R Sbjct: 180 RGSSELIR 187>XP_006722435 Length = 351 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSSKLLR 9 +GSS+L+R Sbjct: 224 RGSSELIR 231>XP_005258240 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSSKLLR 9 +GSS+L+R Sbjct: 367 RGSSELIR 374>XP_006722434 Length = 494 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 KGSSKLLR 9 +GSS+L+R Sbjct: 367 RGSSELIR 374>XP_005247748 Length = 474 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKGSSKLLR 9 G GS+ LLR Sbjct: 217 GSGSNGLLR 225>XP_005247747 Length = 620 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GKGSSKLLR 9 G GS+ LLR Sbjct: 407 GSGSNGLLR 415>XP_005263883 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 KGSSKLLR 9 KGS+ LLR Sbjct: 52 KGSNALLR 59>NP_075054 Length = 467 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GKGSSKLLR 9 G G++KLL+ Sbjct: 417 GPGTAKLLK 425Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.132 0.340 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 625,264 Number of extensions: 1191 Number of successful extensions: 69 Number of sequences better than 10000.0: 69 Number of HSP's gapped: 69 Number of HSP's successfully gapped: 69 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |