Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_002430 19 665 NP_000439 17 4312 NP_997226 17 4312 NP_001265178 17 4312 XP_006718875 17 4312 XP_006718874 17 4312 XP_005253098 17 4312 NP_001070707 17 4312 NP_065805 16 5631 NP_001136157 16 5631 NP_055530 16 5631 NP_002208 16 5631 NP_877398 16 5631 NP_056007 16 5631 NP_055553 16 5631 NP_055209 16 5631 XP_005260738 16 5631 XP_006723618 16 5631 XP_005257924 16 5631 XP_005257923 16 5631 XP_005257922 16 5631 XP_005257921 16 5631 XP_006722263 16 5631 XP_005257920 16 5631 XP_005271793 16 5631 XP_005247728 16 5631 XP_006713777 16 5631 XP_006713193 16 5631 XP_005265162 16 5631 XP_006713192 16 5631 NP_001020769 16 7355 NP_859071 16 7355 NP_075379 16 7355 NP_001138375 16 7355 NP_001124527 16 7355 NP_001166101 16 7355 NP_443180 16 7355 XP_006723065 16 7355 XP_005258546 16 7355 XP_006723064 16 7355 XP_005258545 16 7355 XP_005258544 16 7355 XP_006723063 16 7355 XP_006723062 16 7355 XP_005265964 16 7355 XP_006714928 16 7355 XP_005265962 16 7355 XP_006714927 16 7355 XP_005265961 16 7355 XP_005245127 16 7355 NP_071640 16 7355 NP_002728 15 9605 NP_932327 15 9605 NP_003860 15 9605 NP_006435 15 9605 NP_001036016 15 9605 NP_001252531 15 9605 NP_001036015 15 9605 NP_060529 15 9605 NP_919267 15 9605 XP_006716996 15 9605 NP_001245212 15 9605>NP_002430 Length = 1137 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIVDGISTR 9 GIVDGI TR Sbjct: 930 GIVDGIFTR 938>NP_000439 Length = 1043 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIVDGIS 7 GI+DG+S Sbjct: 536 GIIDGLS 542>NP_997226 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIVDGISTR 9 G+ DG+ST+ Sbjct: 30 GLPDGLSTK 38>NP_001265178 Length = 548 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIVDGISTR 9 G+ DG+ST+ Sbjct: 30 GLPDGLSTK 38>XP_006718875 Length = 603 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIVDGISTR 9 G+ DG+ST+ Sbjct: 85 GLPDGLSTK 93>XP_006718874 Length = 758 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIVDGISTR 9 G+ DG+ST+ Sbjct: 85 GLPDGLSTK 93>XP_005253098 Length = 1043 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIVDGIS 7 GI+DG+S Sbjct: 536 GIIDGLS 542>NP_001070707 Length = 703 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIVDGISTR 9 G+ DG+ST+ Sbjct: 30 GLPDGLSTK 38>NP_065805 Length = 1444 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 49 GIVDGI 54>NP_001136157 Length = 2087 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 400 GIVDGI 405>NP_055530 Length = 1738 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 51 GIVDGI 56>NP_002208 Length = 890 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G++DG+ T Sbjct: 875 GLIDGVHT 882>NP_877398 Length = 1173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 668 GIVDGI 673>NP_056007 Length = 1216 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 668 GIVDGI 673>NP_055553 Length = 1356 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 449 LTDGLSTR 456>NP_055209 Length = 345 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 GIV G+ST Sbjct: 224 GIVGGLST 231>XP_005260738 Length = 877 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 668 GIVDGI 673>XP_006723618 Length = 1173 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 668 GIVDGI 673>XP_005257924 Length = 1122 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 181 LTDGLSTR 188>XP_005257923 Length = 1131 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 190 LTDGLSTR 197>XP_005257922 Length = 1366 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 459 LTDGLSTR 466>XP_005257921 Length = 1370 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 459 LTDGLSTR 466>XP_006722263 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 449 LTDGLSTR 456>XP_005257920 Length = 1390 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IVDGISTR 9 + DG+STR Sbjct: 449 LTDGLSTR 456>XP_005271793 Length = 2061 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 374 GIVDGI 379>XP_005247728 Length = 1413 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 18 GIVDGI 23>XP_006713777 Length = 1424 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GIVDGI Sbjct: 49 GIVDGI 54>XP_006713193 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G++DG+ T Sbjct: 883 GLIDGVHT 890>XP_005265162 Length = 927 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G++DG+ T Sbjct: 912 GLIDGVHT 919>XP_006713192 Length = 935 Score = 16.2 bits (30), Expect = 5631 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G++DG+ T Sbjct: 920 GLIDGVHT 927>NP_001020769 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 48 GVVDGI 53>NP_859071 Length = 890 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 48 GVVDGI 53>NP_075379 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GIVDGIST 8 GI+DG T Sbjct: 86 GIIDGFMT 93>NP_001138375 Length = 339 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GIVDGIST 8 GI+DG T Sbjct: 86 GIIDGFMT 93>NP_001124527 Length = 397 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>NP_001166101 Length = 1123 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 207 GVVDGI 212>NP_443180 Length = 1126 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 343 GVVDGI 348>XP_006723065 Length = 1162 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 208 GVVDGI 213>XP_005258546 Length = 1259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 343 GVVDGI 348>XP_006723064 Length = 1270 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 344 GVVDGI 349>XP_005258545 Length = 1287 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 343 GVVDGI 348>XP_005258544 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 344 GVVDGI 349>XP_006723063 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 343 GVVDGI 348>XP_006723062 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 344 GVVDGI 349>XP_005265964 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>XP_006714928 Length = 362 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>XP_005265962 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>XP_006714927 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>XP_005265961 Length = 422 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>XP_005245127 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDGI Sbjct: 48 GVVDGI 53>NP_071640 Length = 359 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G+VDG+ T Sbjct: 183 GLVDGLVT 190>NP_002728 Length = 672 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 IVDGISTR 9 ++DG++TR Sbjct: 489 MMDGVTTR 496>NP_932327 Length = 607 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDG+ Sbjct: 376 GVVDGV 381>NP_003860 Length = 623 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 G+VDG+ Sbjct: 376 GVVDGV 381>NP_006435 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGIST 8 VDG+ST Sbjct: 1162 VDGVST 1167>NP_001036016 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGIST 8 VDG+ST Sbjct: 1162 VDGVST 1167>NP_001252531 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGIST 8 VDG+ST Sbjct: 1162 VDGVST 1167>NP_001036015 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGIST 8 VDG+ST Sbjct: 1162 VDGVST 1167>NP_060529 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 G++DG+ T Sbjct: 989 GLIDGMHT 996>NP_919267 Length = 240 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIVDGIST 8 GI+ GIST Sbjct: 148 GIILGIST 155>XP_006716996 Length = 1197 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 VDGIST 8 VDG+ST Sbjct: 1162 VDGVST 1167>NP_001245212 Length = 315 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GIVDGI 6 GI+DG+ Sbjct: 153 GIIDGV 158Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.319 0.146 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 454,910 Number of extensions: 864 Number of successful extensions: 62 Number of sequences better than 10000.0: 62 Number of HSP's gapped: 62 Number of HSP's successfully gapped: 62 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |