Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 19 869 XP_006716142 19 869 XP_005250088 19 869 XP_006716141 19 869 XP_005250085 19 869 XP_006716140 19 869 XP_005250084 19 869 XP_005250083 19 869 XP_005250082 19 869 NP_056261 18 1935 XP_006711822 18 1935 XP_006711821 18 1935 NP_006454 17 2528 NP_998787 17 2528 NP_964010 17 2528 NP_001129663 17 2528 NP_056308 17 2528 XP_005264148 17 2528 XP_005264145 17 2528 XP_006711984 17 2528 XP_006711983 17 2528 NP_065850 17 3301 XP_006717993 17 3301 XP_006717992 17 3301 XP_006717991 17 3301 NP_065883 17 4312 NP_068767 17 4312 NP_775960 17 4312 NP_998814 17 4312 NP_060718 17 4312 XP_005269584 17 4312 XP_005269583 17 4312 XP_006717688 17 4312 XP_005269582 17 4312 XP_005251991 17 4312 XP_005245423 17 4312 XP_005245425 17 4312 NP_001164269 17 4312 NP_078836 16 5631 XP_005269208 16 5631 XP_005269207 16 5631 NP_057132 16 7355 NP_001243643 15 9605 NP_002151 15 9605 NP_821075 15 9605 NP_443083 15 9605 NP_821074 15 9605 NP_001230405 15 9605 NP_079375 15 9605 NP_055699 15 9605 NP_001017392 15 9605 NP_001008781 15 9605 XP_006721642 15 9605 XP_006721641 15 9605 XP_006719952 15 9605 XP_006719951 15 9605 XP_005266643 15 9605 XP_006718827 15 9605 XP_005252030 15 9605 XP_006717163 15 9605 XP_006717162 15 9605 XP_006717161 15 9605 XP_006717160 15 9605 XP_005252029 15 9605 XP_006717159 15 9605>NP_733751 Length = 4911 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 915 GIGAVVLPG 923>XP_006716142 Length = 4927 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>XP_005250088 Length = 4928 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>XP_006716141 Length = 4959 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>XP_005250085 Length = 4979 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>XP_006716140 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>XP_005250084 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>XP_005250083 Length = 4982 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 915 GIGAVVLPG 923>XP_005250082 Length = 4983 Score = 18.9 bits (37), Expect = 869 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 GI AVVLPG Sbjct: 916 GIGAVVLPG 924>NP_056261 Length = 2275 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IRAVVLPG 9 ++AVVLPG Sbjct: 126 VKAVVLPG 133>XP_006711822 Length = 2266 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IRAVVLPG 9 ++AVVLPG Sbjct: 117 VKAVVLPG 124>XP_006711821 Length = 2301 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IRAVVLPG 9 ++AVVLPG Sbjct: 152 VKAVVLPG 159>NP_006454 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 253 GLRHVVVPG 261>NP_998787 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 253 GLRHVVVPG 261>NP_964010 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 253 GLRHVVVPG 261>NP_001129663 Length = 851 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+RA+ +PG Sbjct: 363 GLRALAMPG 371>NP_056308 Length = 859 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+RA+ +PG Sbjct: 363 GLRALAMPG 371>XP_005264148 Length = 289 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 118 GLRHVVVPG 126>XP_005264145 Length = 424 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 253 GLRHVVVPG 261>XP_006711984 Length = 457 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 300 GLRHVVVPG 308>XP_006711983 Length = 471 Score = 17.3 bits (33), Expect = 2528 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R VV+PG Sbjct: 300 GLRHVVVPG 308>NP_065850 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+R VVLP Sbjct: 265 GLRCVVLP 272>XP_006717993 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+R VVLP Sbjct: 265 GLRCVVLP 272>XP_006717992 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+R VVLP Sbjct: 265 GLRCVVLP 272>XP_006717991 Length = 436 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+R VVLP Sbjct: 265 GLRCVVLP 272>NP_065883 Length = 1237 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RAVVLPG 9 +AVVLPG Sbjct: 422 KAVVLPG 428>NP_068767 Length = 911 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R + LPG Sbjct: 667 GVRCLCLPG 675>NP_775960 Length = 1285 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G AVVLPG Sbjct: 711 GSPAVVLPG 719>NP_998814 Length = 337 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GIRAVVLP 8 GI++V+LP Sbjct: 130 GIKSVILP 137>NP_060718 Length = 605 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 IRAVVLPG 9 IRA VLPG Sbjct: 14 IRARVLPG 21>XP_005269584 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GIRAVVLP 8 GI++V+LP Sbjct: 14 GIKSVILP 21>XP_005269583 Length = 221 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GIRAVVLP 8 GI++V+LP Sbjct: 14 GIKSVILP 21>XP_006717688 Length = 314 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GIRAVVLP 8 GI++V+LP Sbjct: 130 GIKSVILP 137>XP_005269582 Length = 328 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GIRAVVLP 8 GI++V+LP Sbjct: 121 GIKSVILP 128>XP_005251991 Length = 953 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G AVVLPG Sbjct: 379 GSPAVVLPG 387>XP_005245423 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RAVVLPG 9 +AVVLPG Sbjct: 431 KAVVLPG 437>XP_005245425 Length = 1299 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 RAVVLPG 9 +AVVLPG Sbjct: 484 KAVVLPG 490>NP_001164269 Length = 579 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+RA+V P Sbjct: 168 GVRAIVCP 175>NP_078836 Length = 686 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IRAVVLPG 9 +RA+V+PG Sbjct: 34 LRALVVPG 41>XP_005269208 Length = 455 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IRAVVLPG 9 +RA+V+PG Sbjct: 34 LRALVVPG 41>XP_005269207 Length = 685 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 IRAVVLPG 9 +RA+V+PG Sbjct: 34 LRALVVPG 41>NP_057132 Length = 298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIRAVVLPG 9 G+R+VVL G Sbjct: 201 GVRSVVLFG 209>NP_001243643 Length = 608 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 AVVLPG 9 AV+LPG Sbjct: 92 AVILPG 97>NP_002151 Length = 2201 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>NP_821075 Length = 1105 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 1036 GVRAVVM 1042>NP_443083 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 926 GVRAVVM 932>NP_821074 Length = 1113 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 1044 GVRAVVM 1050>NP_001230405 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 1009 GVRAVVM 1015>NP_079375 Length = 1217 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R V+ PG Sbjct: 390 GLRRVMRPG 398>NP_055699 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ V PG Sbjct: 79 GLRSDVFPG 87>NP_001017392 Length = 1082 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ V PG Sbjct: 79 GLRSDVFPG 87>NP_001008781 Length = 4557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+R VV+P Sbjct: 4134 GLRPVVVP 4141>XP_006721642 Length = 979 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R V+ PG Sbjct: 390 GLRRVMRPG 398>XP_006721641 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R V+ PG Sbjct: 390 GLRRVMRPG 398>XP_006719952 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 926 GVRAVVM 932>XP_006719951 Length = 995 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 926 GVRAVVM 932>XP_005266643 Length = 1098 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIRAVVL 7 G+RAVV+ Sbjct: 1029 GVRAVVM 1035>XP_006718827 Length = 3479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIRAVVLP 8 G+R VV+P Sbjct: 3024 GLRPVVVP 3031>XP_005252030 Length = 1837 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>XP_006717163 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>XP_006717162 Length = 1928 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>XP_006717161 Length = 2019 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>XP_006717160 Length = 2110 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>XP_005252029 Length = 2110 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224>XP_006717159 Length = 2293 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIRAVVLPG 9 G+R+ LPG Sbjct: 1216 GLRSTDLPG 1224Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.328 0.156 0.467 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 521,681 Number of extensions: 869 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |