Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 390 XP_005262424 20 390 NP_001693 18 1135 XP_005251072 18 1135 NP_116176 18 1482 XP_005247896 18 1482 XP_006713857 18 1482 XP_006710853 18 1482 XP_006710852 18 1482 XP_006710851 18 1482 XP_006710850 18 1482 XP_006710849 18 1482 XP_005271124 18 1482 XP_006710848 18 1482 XP_006710847 18 1482 XP_006710846 18 1482 NP_001694 18 1482 NP_056051 18 1935 XP_006714219 18 1935 XP_006714218 18 1935 XP_006714217 18 1935 XP_006714216 18 1935 NP_038475 17 3301 NP_115960 17 3301 NP_740746 17 3301 NP_001257981 17 3301 NP_001276087 17 3301 XP_005260175 17 3301 XP_005259943 17 3301 XP_005259942 17 3301 XP_005259941 17 3301 XP_005255899 17 3301 NP_919227 17 3301 NP_001276088 17 3301 NP_000307 17 4312 NP_001171673 17 4312 XP_005265401 17 4312 XP_005265400 17 4312 XP_005265399 17 4312 XP_006713335 17 4312 NP_001072993 16 7355 XP_006714098 16 7355 NP_001072992 16 7355 NP_006443 16 7355 NP_001243412 15 9605 NP_001243411 15 9605 NP_001970 15 9605 NP_001243413 15 9605 NP_001167597 15 9605 NP_001167601 15 9605 NP_001167596 15 9605 NP_001167600 15 9605 NP_000608 15 9605 NP_001167599 15 9605 NP_001167598 15 9605 XP_005268973 15 9605 XP_005268971 15 9605 XP_005268970 15 9605 XP_005268969 15 9605 XP_005268968 15 9605 XP_005253766 15 9605 XP_005253765 15 9605 XP_005253764 15 9605 NP_060933 15 9605>NP_722576 Length = 3080 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 GIPA+MVAI Sbjct: 2859 GIPAIMVAI 2867>XP_005262424 Length = 2875 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 GIPA+MVAI Sbjct: 2654 GIPAIMVAI 2662>NP_001693 Length = 1584 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VAI Sbjct: 1059 GLPALVVAI 1067>XP_005251072 Length = 1586 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VAI Sbjct: 1056 GLPALVVAI 1064>NP_116176 Length = 797 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PA++VAI Sbjct: 576 GVPAIVVAI 584>XP_005247896 Length = 502 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PA++VAI Sbjct: 281 GVPAIVVAI 289>XP_006713857 Length = 560 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PA++VAI Sbjct: 339 GVPAIVVAI 347>XP_006710853 Length = 1478 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 989 GLPALVVAV 997>XP_006710852 Length = 1497 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 989 GLPALVVAV 997>XP_006710851 Length = 1511 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 989 GLPALVVAV 997>XP_006710850 Length = 1530 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 989 GLPALVVAV 997>XP_006710849 Length = 1530 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 989 GLPALVVAV 997>XP_005271124 Length = 1551 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 1044 GLPALVVAV 1052>XP_006710848 Length = 1552 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 1044 GLPALVVAV 1052>XP_006710847 Length = 1566 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 1044 GLPALVVAV 1052>XP_006710846 Length = 1584 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 1044 GLPALVVAV 1052>NP_001694 Length = 1585 Score = 18.1 bits (35), Expect = 1482 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 1044 GLPALVVAV 1052>NP_056051 Length = 1469 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 989 GMPALIVAV 997>XP_006714219 Length = 806 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 555 GMPALIVAV 563>XP_006714218 Length = 846 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 360 GMPALIVAV 368>XP_006714217 Length = 1013 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 542 GMPALIVAV 550>XP_006714216 Length = 1026 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GIPALMVAI 9 G+PAL+VA+ Sbjct: 555 GMPALIVAV 563>NP_038475 Length = 823 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 653 GVPAVTVAI 661>NP_115960 Length = 652 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 473 GVPAVTVAI 481>NP_740746 Length = 549 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GIPALMV 7 G+PALMV Sbjct: 388 GLPALMV 394>NP_001257981 Length = 765 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 595 GVPAVTVAI 603>NP_001276087 Length = 600 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 421 GVPAVTVAI 429>XP_005260175 Length = 586 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 407 GVPAVTVAI 415>XP_005259943 Length = 551 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 381 GVPAVTVAI 389>XP_005259942 Length = 834 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 664 GVPAVTVAI 672>XP_005259941 Length = 892 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 722 GVPAVTVAI 730>XP_005255899 Length = 596 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GIPALMV 7 G+PALMV Sbjct: 435 GLPALMV 441>NP_919227 Length = 419 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 IPALMVAI 9 IPAL+VA+ Sbjct: 39 IPALLVAV 46>NP_001276088 Length = 526 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VAI Sbjct: 347 GVPAVTVAI 355>NP_000307 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VA+ Sbjct: 330 GLPAVFVAV 338>NP_001171673 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VA+ Sbjct: 330 GLPAVFVAV 338>XP_005265401 Length = 562 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VA+ Sbjct: 299 GLPAVFVAV 307>XP_005265400 Length = 575 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VA+ Sbjct: 312 GLPAVFVAV 320>XP_005265399 Length = 593 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VA+ Sbjct: 330 GLPAVFVAV 338>XP_006713335 Length = 606 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIPALMVAI 9 G+PA+ VA+ Sbjct: 343 GLPAVFVAV 351>NP_001072993 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIPALMVAI 9 GIP + VA+ Sbjct: 327 GIPTVFVAV 335>XP_006714098 Length = 836 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIPALMVAI 9 GIP + VA+ Sbjct: 731 GIPTVFVAV 739>NP_001072992 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIPALMVAI 9 GIP + VA+ Sbjct: 320 GIPTVFVAV 328>NP_006443 Length = 425 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GIPALMVAI 9 GIP + VA+ Sbjct: 320 GIPTVFVAV 328>NP_001243412 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IPALMV 7 IPALMV Sbjct: 420 IPALMV 425>NP_001243411 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IPALMV 7 IPALMV Sbjct: 433 IPALMV 438>NP_001970 Length = 555 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IPALMV 7 IPALMV Sbjct: 486 IPALMV 491>NP_001243413 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 IPALMV 7 IPALMV Sbjct: 433 IPALMV 438>NP_001167597 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 421 IPTLLVAV 428>NP_001167601 Length = 557 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 417 IPTLLVAV 424>NP_001167596 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 450 IPTLLVAV 457>NP_001167600 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 421 IPTLLVAV 428>NP_000608 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 421 IPTLLVAV 428>NP_001167599 Length = 561 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 421 IPTLLVAV 428>NP_001167598 Length = 568 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 421 IPTLLVAV 428>XP_005268973 Length = 489 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 342 IPTLLVAV 349>XP_005268971 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 384 IPTLLVAV 391>XP_005268970 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 384 IPTLLVAV 391>XP_005268969 Length = 564 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 417 IPTLLVAV 424>XP_005268968 Length = 597 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 IPALMVAI 9 IP L+VA+ Sbjct: 450 IPTLLVAV 457>XP_005253766 Length = 270 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIPALMVA 8 G+P LMV+ Sbjct: 17 GLPELMVS 24>XP_005253765 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIPALMVA 8 G+P LMV+ Sbjct: 82 GLPELMVS 89>XP_005253764 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIPALMVA 8 G+P LMV+ Sbjct: 194 GLPELMVS 201>NP_060933 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIPALMVA 8 G+P LMV+ Sbjct: 194 GLPELMVS 201Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.149 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 430,738 Number of extensions: 313 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |