Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000042 20 299 XP_006718908 20 299 XP_005271621 20 299 XP_006718907 20 299 XP_006718906 20 299 XP_005271619 20 299 XP_005271618 20 299 NP_060921 17 2528 NP_001265719 17 2528 NP_001265718 17 2528 NP_114105 17 2528 NP_001053 17 2528 NP_001070650 17 3301 NP_036550 17 3301 NP_665894 17 3301 NP_665893 17 3301 XP_005257253 17 3301 XP_005257252 17 3301 XP_005253065 17 3301 XP_006718321 17 3301 XP_005253064 17 3301 XP_005253063 17 3301 XP_005253062 17 3301 NP_821174 17 4312 NP_001116151 17 4312 NP_065850 17 4312 NP_060340 17 4312 XP_006717993 17 4312 XP_006717992 17 4312 XP_006717991 17 4312 XP_005266009 17 4312 XP_006714961 17 4312 XP_006714960 17 4312 XP_005266007 17 4312 NP_689785 16 5631 XP_006717028 16 5631 XP_006717027 16 5631 XP_005272226 16 5631 NP_001077077 16 7355 NP_114174 16 7355 NP_036468 16 7355 NP_005923 16 7355 NP_001136095 16 7355 NP_001136094 16 7355 NP_115873 16 7355 XP_006722341 16 7355 NP_003822 16 7355 NP_001166122 15 9605 NP_689737 15 9605 NP_001153518 15 9605 NP_001153505 15 9605 NP_009121 15 9605 NP_005906 15 9605 NP_001159506 15 9605 NP_940940 15 9605 NP_001438 15 9605 NP_001243089 15 9605 NP_079273 15 9605 NP_001093328 15 9605 NP_443132 15 9605 NP_937757 15 9605 NP_937756 15 9605 XP_006721016 15 9605 XP_005269527 15 9605 XP_005269526 15 9605 XP_005249901 15 9605 XP_006714824 15 9605 XP_005246402 15 9605 XP_006712393 15 9605 XP_005246401 15 9605 NP_076959 15 9605>NP_000042 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 2644 GINIPADQP 2652>XP_006718908 Length = 1708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 1296 GINIPADQP 1304>XP_005271621 Length = 2708 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 2296 GINIPADQP 2304>XP_006718907 Length = 3050 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 2638 GINIPADQP 2646>XP_006718906 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 2644 GINIPADQP 2652>XP_005271619 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 2644 GINIPADQP 2652>XP_005271618 Length = 3056 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GINI ADQP Sbjct: 2644 GINIPADQP 2652>NP_060921 Length = 1338 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +NIS DQP Sbjct: 889 LNISQDQP 896>NP_001265719 Length = 285 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 G+ +SA+QP Sbjct: 2 GLGVSAEQP 10>NP_001265718 Length = 345 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 G+ +SA+QP Sbjct: 2 GLGVSAEQP 10>NP_114105 Length = 440 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 G+ +SA+QP Sbjct: 2 GLGVSAEQP 10>NP_001053 Length = 433 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 NISADQP 9 NISAD+P Sbjct: 316 NISADEP 322>NP_001070650 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GINISADQ 8 G+N+SA+Q Sbjct: 276 GVNVSANQ 283>NP_036550 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GINISADQ 8 G+N+SA+Q Sbjct: 276 GVNVSANQ 283>NP_665894 Length = 893 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 675 GIDVDADRP 683>NP_665893 Length = 910 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 675 GIDVDADRP 683>XP_005257253 Length = 492 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GINISADQ 8 G+N+SA+Q Sbjct: 276 GVNVSANQ 283>XP_005257252 Length = 516 Score = 16.9 bits (32), Expect = 3301 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GINISADQ 8 G+N+SA+Q Sbjct: 276 GVNVSANQ 283>XP_005253065 Length = 788 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 553 GIDVDADRP 561>XP_006718321 Length = 917 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 699 GIDVDADRP 707>XP_005253064 Length = 934 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 699 GIDVDADRP 707>XP_005253063 Length = 934 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 699 GIDVDADRP 707>XP_005253062 Length = 934 Score = 16.9 bits (32), Expect = 3301 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ AD+P Sbjct: 699 GIDVDADRP 707>NP_821174 Length = 1023 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GINISADQP 9 G+++SA++P Sbjct: 703 GLSVSAEEP 711>NP_001116151 Length = 2765 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N++ QP Sbjct: 2637 GVNVTVSQP 2645>NP_065850 Length = 436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +N+ ADQP Sbjct: 223 LNVFADQP 230>NP_060340 Length = 1024 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GINISADQP 9 G+++SA++P Sbjct: 704 GLSVSAEEP 712>XP_006717993 Length = 436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +N+ ADQP Sbjct: 223 LNVFADQP 230>XP_006717992 Length = 436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +N+ ADQP Sbjct: 223 LNVFADQP 230>XP_006717991 Length = 436 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +N+ ADQP Sbjct: 223 LNVFADQP 230>XP_005266009 Length = 2378 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N++ QP Sbjct: 2250 GVNVTVSQP 2258>XP_006714961 Length = 2548 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N++ QP Sbjct: 2420 GVNVTVSQP 2428>XP_006714960 Length = 2758 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N++ QP Sbjct: 2630 GVNVTVSQP 2638>XP_005266007 Length = 2765 Score = 16.5 bits (31), Expect = 4312 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N++ QP Sbjct: 2637 GVNVTVSQP 2645>NP_689785 Length = 479 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISADQP 9 ISADQP Sbjct: 240 ISADQP 245>XP_006717028 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISADQP 9 ISADQP Sbjct: 168 ISADQP 173>XP_006717027 Length = 434 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISADQP 9 ISADQP Sbjct: 195 ISADQP 200>XP_005272226 Length = 491 Score = 16.2 bits (30), Expect = 5631 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 ISADQP 9 ISADQP Sbjct: 252 ISADQP 257>NP_001077077 Length = 408 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 22 NVSADAP 28>NP_114174 Length = 502 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 22 NVSADAP 28>NP_036468 Length = 456 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 22 NVSADAP 28>NP_005923 Length = 713 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GINISADQP 9 GI++ A+QP Sbjct: 399 GISLYAEQP 407>NP_001136095 Length = 474 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N+ +QP Sbjct: 300 GLNLQPEQP 308>NP_001136094 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N+ +QP Sbjct: 261 GLNLQPEQP 269>NP_115873 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 G+N+ +QP Sbjct: 300 GLNLQPEQP 308>XP_006722341 Length = 411 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 22 NVSADAP 28>NP_003822 Length = 519 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GINISAD 7 G+NI+AD Sbjct: 470 GLNITAD 476>NP_001166122 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GINISADQP 9 GIN + +QP Sbjct: 109 GINTAENQP 117>NP_689737 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 284 NLSADTP 290>NP_001153518 Length = 1261 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 284 NLSADTP 290>NP_001153505 Length = 1260 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 284 NLSADTP 290>NP_009121 Length = 1000 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +NIS +QP Sbjct: 991 MNISPEQP 998>NP_005906 Length = 821 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GINISADQP 9 GIN AD P Sbjct: 682 GINGHADSP 690>NP_001159506 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GINISADQ 8 G+N +ADQ Sbjct: 497 GVNHAADQ 504>NP_940940 Length = 247 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GINISADQ 8 G+N +ADQ Sbjct: 154 GVNHAADQ 161>NP_001438 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 IN++A QP Sbjct: 626 INLTAGQP 633>NP_001243089 Length = 543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 INISADQ 8 IN+S+DQ Sbjct: 438 INLSSDQ 444>NP_079273 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 INISADQ 8 IN+S+DQ Sbjct: 438 INLSSDQ 444>NP_001093328 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INISADQP 9 IN+ DQP Sbjct: 392 INVVPDQP 399>NP_443132 Length = 3538 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GINISA 6 GINISA Sbjct: 1174 GINISA 1179>NP_937757 Length = 3667 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GINISA 6 GINISA Sbjct: 1238 GINISA 1243>NP_937756 Length = 3707 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 1 GINISA 6 GINISA Sbjct: 1278 GINISA 1283>XP_006721016 Length = 682 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 INISADQ 8 IN+S+DQ Sbjct: 438 INLSSDQ 444>XP_005269527 Length = 953 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +NIS +QP Sbjct: 944 MNISPEQP 951>XP_005269526 Length = 999 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 +NIS +QP Sbjct: 990 MNISPEQP 997>XP_005249901 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INISADQP 9 IN+ DQP Sbjct: 334 INVVPDQP 341>XP_006714824 Length = 4349 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 INISADQP 9 IN++A QP Sbjct: 626 INLTAGQP 633>XP_005246402 Length = 1265 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 284 NLSADTP 290>XP_006712393 Length = 1267 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 290 NLSADTP 296>XP_005246401 Length = 1271 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NISADQP 9 N+SAD P Sbjct: 290 NLSADTP 296>NP_076959 Length = 421 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 INISADQP 9 IN+ DQP Sbjct: 334 INVVPDQP 341Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.307 0.133 0.374 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 497,547 Number of extensions: 945 Number of successful extensions: 71 Number of sequences better than 10000.0: 71 Number of HSP's gapped: 71 Number of HSP's successfully gapped: 71 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |