Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001167558 20 299 NP_858045 20 299 NP_006525 20 299 NP_001167559 20 299 NP_001008395 17 2528 NP_115560 17 3301 XP_005271313 17 3301 XP_005271311 17 3301 XP_006711009 17 3301 XP_005271309 17 3301 XP_006711008 17 3301 NP_000262 16 7355 NP_542402 16 7355 NP_065829 16 7355 NP_997465 16 7355 NP_849195 16 7355 NP_006725 16 7355 NP_001073996 16 7355 XP_005259257 16 7355 XP_005259256 16 7355 XP_006722542 16 7355 XP_005258336 16 7355 XP_005258335 16 7355 XP_005258334 16 7355 XP_005267014 16 7355 XP_006712602 16 7355 NP_003361 16 7355 NP_036474 16 7355 NP_001035203 15 9605 NP_074035 15 9605 NP_001035202 15 9605 NP_002465 15 9605 NP_002464 15 9605 NP_002968 15 9605 NP_001273148 15 9605 NP_001242941 15 9605 NP_001139281 15 9605 NP_705618 15 9605 NP_005955 15 9605 NP_001070654 15 9605 NP_443139 15 9605 NP_004289 15 9605 NP_079005 15 9605 NP_001265241 15 9605 NP_001243024 15 9605 XP_006723449 15 9605 XP_005256710 15 9605 XP_005256709 15 9605 XP_005256708 15 9605 XP_006720233 15 9605 XP_005267806 15 9605 XP_006720232 15 9605 XP_006720231 15 9605 XP_006719284 15 9605 XP_006719283 15 9605 XP_006719282 15 9605 XP_005246814 15 9605 NP_057421 15 9605>NP_001167558 Length = 1423 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMEPMNSN 9 G MEPMNSN Sbjct: 928 GRMEPMNSN 936>NP_858045 Length = 1424 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMEPMNSN 9 G MEPMNSN Sbjct: 928 GRMEPMNSN 936>NP_006525 Length = 1420 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMEPMNSN 9 G MEPMNSN Sbjct: 928 GRMEPMNSN 936>NP_001167559 Length = 1415 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GIMEPMNSN 9 G MEPMNSN Sbjct: 923 GRMEPMNSN 931>NP_001008395 Length = 333 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 IMEPMNSN 9 I+EPMN N Sbjct: 282 ILEPMNVN 289>NP_115560 Length = 1194 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 GIMEP + N Sbjct: 494 GIMEPSSPN 502>XP_005271313 Length = 936 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 GIMEP + N Sbjct: 236 GIMEPSSPN 244>XP_005271311 Length = 1051 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 GIMEP + N Sbjct: 691 GIMEPSSPN 699>XP_006711009 Length = 1108 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 GIMEP + N Sbjct: 691 GIMEPSSPN 699>XP_005271309 Length = 1228 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 GIMEP + N Sbjct: 691 GIMEPSSPN 699>XP_006711008 Length = 1262 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 GIMEP + N Sbjct: 691 GIMEPSSPN 699>NP_000262 Length = 1278 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MEPMNS 8 MEPMN+ Sbjct: 217 MEPMNN 222>NP_542402 Length = 221 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MEPMNS 8 MEP+NS Sbjct: 55 MEPLNS 60>NP_065829 Length = 1907 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GIMEPMN 7 GI+EPM+ Sbjct: 785 GIIEPMD 791>NP_997465 Length = 538 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GIMEPMNS 8 G+M P NS Sbjct: 84 GLMRPANS 91>NP_849195 Length = 802 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GIMEPMNSN 9 G +EP++SN Sbjct: 663 GGLEPLDSN 671>NP_006725 Length = 2446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIMEPM 6 GIMEP+ Sbjct: 454 GIMEPL 459>NP_001073996 Length = 2116 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 G++ PM+ N Sbjct: 54 GVLSPMHPN 62>XP_005259257 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMEPMNS 8 G+ME MN+ Sbjct: 262 GLMEEMNA 269>XP_005259256 Length = 379 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMEPMNS 8 G+ME MN+ Sbjct: 261 GLMEEMNA 268>XP_006722542 Length = 1273 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MEPMNS 8 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005258336 Length = 1286 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MEPMNS 8 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005258335 Length = 1295 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MEPMNS 8 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005258334 Length = 1303 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MEPMNS 8 MEPMN+ Sbjct: 217 MEPMNN 222>XP_005267014 Length = 2446 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GIMEPM 6 GIMEP+ Sbjct: 454 GIMEPL 459>XP_006712602 Length = 2142 Score = 15.8 bits (29), Expect = 7355 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GIMEPMNSN 9 G++ PM+ N Sbjct: 54 GVLSPMHPN 62>NP_003361 Length = 380 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GIMEPMNS 8 G+ME MN+ Sbjct: 262 GLMEEMNA 269>NP_036474 Length = 260 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 IMEPMNSN 9 +++P NSN Sbjct: 55 LLDPQNSN 62>NP_001035203 Length = 1979 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 603 MDPLNDN 609>NP_074035 Length = 1938 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 596 MDPLNDN 602>NP_001035202 Length = 1945 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 603 MDPLNDN 609>NP_002465 Length = 1972 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 596 MDPLNDN 602>NP_002464 Length = 1960 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 589 MDPLNDN 595>NP_002968 Length = 1977 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 1133 EPMNSD 1138>NP_001273148 Length = 590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 524 EPMNSS 529>NP_001242941 Length = 2007 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 606 MDPLNDN 612>NP_001139281 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 623 MDPLNDN 629>NP_705618 Length = 1391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GIMEPMNSN 9 G M P N N Sbjct: 747 GFMRPENGN 755>NP_005955 Length = 1976 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 596 MDPLNDN 602>NP_001070654 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 623 MDPLNDN 629>NP_443139 Length = 1078 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 1012 EPMNSS 1017>NP_004289 Length = 1332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GIMEPMNSN 9 G M P N N Sbjct: 688 GFMRPENGN 696>NP_079005 Length = 1995 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 615 MDPLNDN 621>NP_001265241 Length = 1327 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 5/9 (55%) Query: 1 GIMEPMNSN 9 G M P N N Sbjct: 747 GFMRPENGN 755>NP_001243024 Length = 1985 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 605 MDPLNDN 611>XP_006723449 Length = 2003 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 623 MDPLNDN 629>XP_005256710 Length = 1986 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 606 MDPLNDN 612>XP_005256709 Length = 1997 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 596 MDPLNDN 602>XP_005256708 Length = 2007 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MEPMNSN 9 M+P+N N Sbjct: 606 MDPLNDN 612>XP_006720233 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMEPMN 7 G+ME MN Sbjct: 309 GLMEEMN 315>XP_005267806 Length = 422 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMEPMN 7 G+ME MN Sbjct: 272 GLMEEMN 278>XP_006720232 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMEPMN 7 G+ME MN Sbjct: 309 GLMEEMN 315>XP_006720231 Length = 459 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMEPMN 7 G+ME MN Sbjct: 309 GLMEEMN 315>XP_006719284 Length = 676 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 610 EPMNSS 615>XP_006719283 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 902 EPMNSS 907>XP_006719282 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 902 EPMNSS 907>XP_005246814 Length = 1988 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 EPMNSN 9 EPMNS+ Sbjct: 1144 EPMNSD 1149>NP_057421 Length = 418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GIMEPMN 7 G+ME MN Sbjct: 268 GLMEEMN 274Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.306 0.125 0.354 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 662,671 Number of extensions: 1342 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |