Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001276866 20 509 NP_004439 20 509 NP_001276865 20 509 NP_001005862 20 509 XP_005257197 20 509 XP_006721828 20 509 NP_001268678 17 2528 NP_079440 17 2528 NP_001268677 17 2528 XP_005271543 17 2528 XP_005271542 17 2528 XP_005271541 17 2528 XP_005271539 17 2528 XP_005271538 17 2528 NP_001036189 17 4312 XP_005254376 16 5631 XP_006720539 16 5631 XP_006720538 16 5631 XP_005254375 16 5631 XP_005254374 16 5631 XP_006710508 16 5631 XP_006710507 16 5631 NP_689910 16 5631 NP_001008227 16 5631 NP_001137432 16 7355 NP_001137431 16 7355 XP_005264347 16 7355 XP_005264346 16 7355 XP_005264345 16 7355 XP_005264344 16 7355 NP_000284 15 9605 NP_001027005 15 9605 NP_060021 15 9605 NP_001127913 15 9605 NP_001127912 15 9605 NP_056017 15 9605 NP_689854 15 9605 NP_149987 15 9605 NP_001269809 15 9605 NP_071735 15 9605 NP_036345 15 9605 XP_005256041 15 9605 XP_005256040 15 9605 XP_005255263 15 9605 XP_005255261 15 9605 XP_006721088 15 9605 XP_005255260 15 9605 XP_005255259 15 9605 XP_005255258 15 9605 XP_006719336 15 9605 XP_006719335 15 9605 XP_006717867 15 9605 XP_006713446 15 9605 XP_005265443 15 9605 XP_005265442 15 9605 XP_005265441 15 9605 XP_005265440 15 9605 NP_001127914 15 9605>NP_001276866 Length = 1055 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GILIKRQQQ 9 GILIKR+QQ Sbjct: 672 GILIKRRQQ 680>NP_004439 Length = 1255 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GILIKRQQQ 9 GILIKR+QQ Sbjct: 672 GILIKRRQQ 680>NP_001276865 Length = 1240 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GILIKRQQQ 9 GILIKR+QQ Sbjct: 657 GILIKRRQQ 665>NP_001005862 Length = 1225 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GILIKRQQQ 9 GILIKR+QQ Sbjct: 642 GILIKRRQQ 650>XP_005257197 Length = 1225 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GILIKRQQQ 9 GILIKR+QQ Sbjct: 642 GILIKRRQQ 650>XP_006721828 Length = 1336 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GILIKRQQQ 9 GILIKR+QQ Sbjct: 753 GILIKRRQQ 761>NP_001268678 Length = 1261 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 935 LIKRQQQ 941>NP_079440 Length = 1321 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 995 LIKRQQQ 1001>NP_001268677 Length = 1102 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 776 LIKRQQQ 782>XP_005271543 Length = 722 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 396 LIKRQQQ 402>XP_005271542 Length = 770 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 444 LIKRQQQ 450>XP_005271541 Length = 1203 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 877 LIKRQQQ 883>XP_005271539 Length = 1263 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 937 LIKRQQQ 943>XP_005271538 Length = 1369 Score = 17.3 bits (33), Expect = 2528 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIKRQQQ Sbjct: 1043 LIKRQQQ 1049>NP_001036189 Length = 538 Score = 16.5 bits (31), Expect = 4312 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GILI RQQ+ Sbjct: 378 GILICRQQR 386>XP_005254376 Length = 383 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIK+QQQ Sbjct: 284 LIKKQQQ 290>XP_006720539 Length = 383 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIK+QQQ Sbjct: 284 LIKKQQQ 290>XP_006720538 Length = 411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIK+QQQ Sbjct: 312 LIKKQQQ 318>XP_005254375 Length = 411 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIK+QQQ Sbjct: 312 LIKKQQQ 318>XP_005254374 Length = 458 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIK+QQQ Sbjct: 359 LIKKQQQ 365>XP_006710508 Length = 677 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GILIK+Q Sbjct: 663 GILIKKQ 669>XP_006710507 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GILIK+Q Sbjct: 705 GILIKKQ 711>NP_689910 Length = 719 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GILIK+Q Sbjct: 705 GILIKKQ 711>NP_001008227 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 LIK+QQQ Sbjct: 299 LIKKQQQ 305>NP_001137432 Length = 115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GIL++RQ + Sbjct: 13 GILVQRQSK 21>NP_001137431 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GIL++RQ + Sbjct: 92 GILVQRQSK 100>XP_005264347 Length = 115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GIL++RQ + Sbjct: 13 GILVQRQSK 21>XP_005264346 Length = 115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GIL++RQ + Sbjct: 13 GILVQRQSK 21>XP_005264345 Length = 115 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GIL++RQ + Sbjct: 13 GILVQRQSK 21>XP_005264344 Length = 194 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GIL++RQ + Sbjct: 92 GILVQRQSK 100>NP_000284 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GIL+KR+ Sbjct: 745 GILLKRE 751>NP_001027005 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GIL+KR+ Sbjct: 738 GILLKRE 744>NP_060021 Length = 1009 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GILIK+ ++ Sbjct: 542 GILIKKPEE 550>NP_001127913 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GI++KR Q+ Sbjct: 39 GIVVKRFQE 47>NP_001127912 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GI++KR Q+ Sbjct: 39 GIVVKRFQE 47>NP_056017 Length = 1618 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 424 GLLGSRQQQ 432>NP_689854 Length = 1835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IKRQQQ 9 +KRQQQ Sbjct: 1009 VKRQQQ 1014>NP_149987 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GI++KR Q+ Sbjct: 39 GIVVKRFQE 47>NP_001269809 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GI++KR Q+ Sbjct: 39 GIVVKRFQE 47>NP_071735 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 L+KR+QQ Sbjct: 259 LLKREQQ 265>NP_036345 Length = 493 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 108 GVLHLRQQQ 116>XP_005256041 Length = 1086 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GIL+KR+ Sbjct: 738 GILLKRE 744>XP_005256040 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GILIKRQ 7 GIL+KR+ Sbjct: 745 GILLKRE 751>XP_005255263 Length = 1248 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 485 GLLGSRQQQ 493>XP_005255261 Length = 1280 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 485 GLLGSRQQQ 493>XP_006721088 Length = 1592 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 398 GLLGSRQQQ 406>XP_005255260 Length = 1636 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 442 GLLGSRQQQ 450>XP_005255259 Length = 1661 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 467 GLLGSRQQQ 475>XP_005255258 Length = 1679 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GILIKRQQQ 9 G+L RQQQ Sbjct: 485 GLLGSRQQQ 493>XP_006719336 Length = 1779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IKRQQQ 9 +KRQQQ Sbjct: 953 VKRQQQ 958>XP_006719335 Length = 1793 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 IKRQQQ 9 +KRQQQ Sbjct: 1009 VKRQQQ 1014>XP_006717867 Length = 896 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GILIK+ ++ Sbjct: 542 GILIKKPEE 550>XP_006713446 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GI++KR Q+ Sbjct: 39 GIVVKRFQE 47>XP_005265443 Length = 695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 L+KR+QQ Sbjct: 170 LLKREQQ 176>XP_005265442 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 L+KR+QQ Sbjct: 259 LLKREQQ 265>XP_005265441 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 L+KR+QQ Sbjct: 259 LLKREQQ 265>XP_005265440 Length = 784 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 LIKRQQQ 9 L+KR+QQ Sbjct: 259 LLKREQQ 265>NP_001127914 Length = 544 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GILIKRQQQ 9 GI++KR Q+ Sbjct: 39 GIVVKRFQE 47Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.327 0.144 0.370 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 526,030 Number of extensions: 960 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |