Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001180350 20 509 NP_775756 20 509 NP_722576 20 509 XP_006723760 20 509 NP_005777 18 1135 XP_005266698 18 1135 XP_005266697 18 1135 NP_001135780 18 1135 NP_690605 17 2528 NP_068769 17 2528 NP_065861 17 3301 NP_001128523 17 3301 NP_065991 17 3301 NP_061836 17 3301 NP_387505 17 3301 XP_005261051 17 3301 XP_005267973 17 3301 NP_001116236 16 5631 NP_000300 16 5631 XP_005257719 16 5631 XP_006711467 16 5631 NP_001009894 16 5631 NP_001124481 16 7355 NP_001124480 16 7355 NP_002826 16 7355 NP_002218 16 7355 NP_001275918 16 7355 NP_001159451 16 7355 NP_065191 16 7355 NP_001275880 16 7355 NP_057425 16 7355 NP_056098 16 7355 NP_001276091 16 7355 NP_001034656 16 7355 XP_006721364 16 7355 XP_006717953 16 7355 XP_006717952 16 7355 XP_006717951 16 7355 XP_006717950 16 7355 XP_006717949 16 7355 XP_006717948 16 7355 XP_006716137 16 7355 XP_005250575 16 7355 XP_006716136 16 7355 XP_006713783 16 7355 XP_005247745 16 7355 XP_006713782 16 7355 XP_005264497 16 7355 XP_005270898 16 7355 XP_006710687 16 7355 NP_006497 16 7355 NP_001276092 16 7355 NP_115645 16 7355 NP_001265 15 9605 NP_001231775 15 9605 NP_001107593 15 9605 NP_001107594 15 9605 NP_653178 15 9605 NP_848018 15 9605 NP_695014 15 9605 XP_005259473 15 9605 XP_005259472 15 9605 XP_005259470 15 9605 XP_005259471 15 9605 XP_006723567 15 9605 XP_006718822 15 9605 NP_777568 15 9605>NP_001180350 Length = 1031 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK+ SS Sbjct: 400 GHFLKVTSS 408>NP_775756 Length = 1034 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK+ SS Sbjct: 403 GHFLKVTSS 411>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK ESS Sbjct: 161 GHFLKNESS 169>XP_006723760 Length = 1038 Score = 19.6 bits (39), Expect = 509 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK+ SS Sbjct: 407 GHFLKVTSS 415>NP_005777 Length = 1032 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK+ +S Sbjct: 394 GHFLKVTTS 402>XP_005266698 Length = 1032 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK+ +S Sbjct: 394 GHFLKVTTS 402>XP_005266697 Length = 1077 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GHFLK+ +S Sbjct: 439 GHFLKVTTS 447>NP_001135780 Length = 2156 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH+L IESS Sbjct: 909 GHYLYIESS 917>NP_690605 Length = 297 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLKIES 8 HFLK+ES Sbjct: 145 HFLKMES 151>NP_068769 Length = 297 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 HFLKIES 8 HFLK+ES Sbjct: 145 HFLKMES 151>NP_065861 Length = 509 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GHFLKIES 8 G FLK+ES Sbjct: 14 GRFLKLES 21>NP_001128523 Length = 738 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHFLKI 6 GHFLK+ Sbjct: 633 GHFLKV 638>NP_065991 Length = 765 Score = 16.9 bits (32), Expect = 3301 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GHFLKI 6 GHFLK+ Sbjct: 633 GHFLKV 638>NP_061836 Length = 2320 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 FLKIESS 9 FLKIESS Sbjct: 1750 FLKIESS 1756>NP_387505 Length = 2269 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 FLKIESS 9 FLKIESS Sbjct: 1750 FLKIESS 1756>XP_005261051 Length = 2242 Score = 16.9 bits (32), Expect = 3301 Identities = 7/7 (100%), Positives = 7/7 (100%) Query: 3 FLKIESS 9 FLKIESS Sbjct: 1672 FLKIESS 1678>XP_005267973 Length = 537 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GHFLKIES 8 G FLK+ES Sbjct: 42 GRFLKLES 49>NP_001116236 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH+ K+ES+ Sbjct: 425 GHWQKLESA 433>NP_000300 Length = 477 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH+ K+ES+ Sbjct: 425 GHWQKLESA 433>XP_005257719 Length = 302 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GHFLKIES 8 GHF +ES Sbjct: 13 GHFCSLES 20>XP_006711467 Length = 482 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH+ K+ES+ Sbjct: 430 GHWQKLESA 438>NP_001009894 Length = 325 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 HFLKIES 8 HFLKI++ Sbjct: 306 HFLKIDN 312>NP_001124481 Length = 650 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH +KI+S+ Sbjct: 329 GHAIKIKSA 337>NP_001124480 Length = 661 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH +KI+S+ Sbjct: 340 GHAIKIKSA 348>NP_002826 Length = 780 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH +KI+S+ Sbjct: 459 GHAIKIKSA 467>NP_002218 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GHFLKIE 7 GHF K+E Sbjct: 884 GHFGKVE 890>NP_001275918 Length = 2286 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1397 GHQLKGESS 1405>NP_001159451 Length = 1994 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1105 GHQLKGESS 1113>NP_065191 Length = 858 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GHFLKIES 8 G +LK+ES Sbjct: 8 GSYLKVES 15>NP_001275880 Length = 882 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GHFLKIES 8 G +LK+ES Sbjct: 8 GSYLKVES 15>NP_057425 Length = 2302 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1413 GHQLKGESS 1421>NP_056098 Length = 675 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HFLKIESS 9 HFLKI S Sbjct: 328 HFLKINVS 335>NP_001276091 Length = 874 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLKIES 8 HFL IES Sbjct: 334 HFLGIES 340>NP_001034656 Length = 263 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HFLKIE 7 HFLKI+ Sbjct: 68 HFLKID 73>XP_006721364 Length = 831 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLKIES 8 HFL IES Sbjct: 334 HFLGIES 340>XP_006717953 Length = 2008 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1105 GHQLKGESS 1113>XP_006717952 Length = 2300 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1397 GHQLKGESS 1405>XP_006717951 Length = 2315 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1413 GHQLKGESS 1421>XP_006717950 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1413 GHQLKGESS 1421>XP_006717949 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1413 GHQLKGESS 1421>XP_006717948 Length = 2316 Score = 15.8 bits (29), Expect = 7355 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GHFLKIESS 9 GH LK ESS Sbjct: 1413 GHQLKGESS 1421>XP_006716137 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH +KI+S+ Sbjct: 344 GHAIKIKSA 352>XP_005250575 Length = 665 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH +KI+S+ Sbjct: 344 GHAIKIKSA 352>XP_006716136 Length = 748 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GHFLKIESS 9 GH +KI+S+ Sbjct: 427 GHAIKIKSA 435>XP_006713783 Length = 633 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GHFLKI 6 GH+LK+ Sbjct: 194 GHYLKV 199>XP_005247745 Length = 850 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GHFLKI 6 GH+LK+ Sbjct: 415 GHYLKV 420>XP_006713782 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GHFLKI 6 GH+LK+ Sbjct: 415 GHYLKV 420>XP_005264497 Length = 730 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GHFLKIES 8 G +LK+ES Sbjct: 8 GSYLKVES 15>XP_005270898 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GHFLKIE 7 GHF K+E Sbjct: 884 GHFGKVE 890>XP_006710687 Length = 1154 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GHFLKIE 7 GHF K+E Sbjct: 884 GHFGKVE 890>NP_006497 Length = 849 Score = 15.8 bits (29), Expect = 7355 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GHFLKI 6 GH+LK+ Sbjct: 415 GHYLKV 420>NP_001276092 Length = 809 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLKIES 8 HFL IES Sbjct: 269 HFLGIES 275>NP_115645 Length = 874 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 HFLKIES 8 HFL IES Sbjct: 334 HFLGIES 340>NP_001265 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HFLKIE 7 HFLKI+ Sbjct: 454 HFLKIK 459>NP_001231775 Length = 442 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HFLKIE 7 HFLKI+ Sbjct: 420 HFLKIK 425>NP_001107593 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HFLKIE 7 HFLKI+ Sbjct: 454 HFLKIK 459>NP_001107594 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HFLKIE 7 HFLKI+ Sbjct: 454 HFLKIK 459>NP_653178 Length = 670 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLKIESS 9 HFLK++++ Sbjct: 225 HFLKLKNN 232>NP_848018 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HFLKIESS 9 HF K ESS Sbjct: 467 HFSKSESS 474>NP_695014 Length = 405 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 HFLKIES 8 HFL +ES Sbjct: 296 HFLPLES 302>XP_005259473 Length = 479 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLKIESS 9 HFLK++++ Sbjct: 34 HFLKLKNN 41>XP_005259472 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLKIESS 9 HFLK++++ Sbjct: 262 HFLKLKNN 269>XP_005259470 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLKIESS 9 HFLK++++ Sbjct: 262 HFLKLKNN 269>XP_005259471 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLKIESS 9 HFLK++++ Sbjct: 262 HFLKLKNN 269>XP_006723567 Length = 720 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 2 HFLKIESS 9 HFLK++++ Sbjct: 275 HFLKLKNN 282>XP_006718822 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 HFLKIE 7 HFLKI+ Sbjct: 454 HFLKIK 459>NP_777568 Length = 306 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 HFLKIESS 9 HF K ESS Sbjct: 291 HFSKSESS 298Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.317 0.136 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 506,665 Number of extensions: 715 Number of successful extensions: 67 Number of sequences better than 10000.0: 67 Number of HSP's gapped: 67 Number of HSP's successfully gapped: 67 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |