Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_004295 21 175 NP_444505 17 2528 NP_000993 17 2528 NP_001268421 17 4312 NP_000170 17 4312 NP_620311 17 4312 NP_001185748 17 4312 NP_001268422 17 4312 NP_001268423 17 4312 NP_620310 17 4312 NP_001185749 17 4312 NP_055391 17 4312 NP_001185747 17 4312 XP_006717872 17 4312 XP_005269777 17 4312 XP_005269776 17 4312 XP_006717871 17 4312 XP_005269775 17 4312 XP_005264328 17 4312 NP_001127928 16 5631 NP_659474 16 5631 NP_078868 16 7355 NP_001265558 16 7355 NP_689999 16 7355 NP_001265559 16 7355 XP_005251942 16 7355 XP_005251941 16 7355 NP_000365 15 9605 NP_055833 15 9605 NP_078997 15 9605 NP_001186871 15 9605 NP_001096645 15 9605 NP_008816 15 9605 XP_005256014 15 9605 XP_005255192 15 9605 XP_006720913 15 9605 XP_006717822 15 9605 XP_006717821 15 9605 XP_005269749 15 9605 XP_006717820 15 9605 XP_006715464 15 9605 XP_006715463 15 9605 XP_006715462 15 9605 XP_006715461 15 9605 XP_006715460 15 9605 XP_006715459 15 9605 XP_006715458 15 9605 XP_006715457 15 9605 XP_006715456 15 9605 XP_005271227 15 9605 XP_005271226 15 9605 NP_065081 15 9605>NP_004295 Length = 1620 Score = 21.2 bits (43), Expect = 175 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GGKNTMMQS 9 GGKNTMM+S Sbjct: 746 GGKNTMMRS 754>NP_444505 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKNTMMQ 8 GKNTMM+ Sbjct: 56 GKNTMMR 62>NP_000993 Length = 317 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 GKNTMMQ 8 GKNTMM+ Sbjct: 56 GKNTMMR 62>NP_001268421 Length = 1230 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGKNTMMQ 8 GGK+T+M+ Sbjct: 1008 GGKSTLMR 1015>NP_000170 Length = 1360 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGKNTMMQ 8 GGK+T+M+ Sbjct: 1138 GGKSTLMR 1145>NP_620311 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 325 GGRGTMLQ 332>NP_001185748 Length = 602 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 325 GGRGTMLQ 332>NP_001268422 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGKNTMMQ 8 GGK+T+M+ Sbjct: 836 GGKSTLMR 843>NP_001268423 Length = 1058 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGKNTMMQ 8 GGK+T+M+ Sbjct: 836 GGKSTLMR 843>NP_620310 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>NP_001185749 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 325 GGRGTMLQ 332>NP_055391 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>NP_001185747 Length = 586 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>XP_006717872 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 325 GGRGTMLQ 332>XP_005269777 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>XP_005269776 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>XP_006717871 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>XP_005269775 Length = 594 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 GG+ TM+Q Sbjct: 317 GGRGTMLQ 324>XP_005264328 Length = 1261 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGKNTMMQ 8 GGK+T+M+ Sbjct: 1039 GGKSTLMR 1046>NP_001127928 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGKNTMM 7 GGKNT++ Sbjct: 434 GGKNTVV 440>NP_659474 Length = 559 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGKNTMM 7 GGKNT++ Sbjct: 434 GGKNTVV 440>NP_078868 Length = 318 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKNTMMQS 9 GKN +MQ+ Sbjct: 192 GKNLLMQA 199>NP_001265558 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGKNTMM 7 GGK TM+ Sbjct: 223 GGKQTML 229>NP_689999 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGKNTMM 7 GGK TM+ Sbjct: 223 GGKQTML 229>NP_001265559 Length = 479 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGKNTMM 7 GGK TM+ Sbjct: 241 GGKQTML 247>XP_005251942 Length = 327 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGKNTMM 7 GGK TM+ Sbjct: 89 GGKQTML 95>XP_005251941 Length = 461 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GGKNTMM 7 GGK TM+ Sbjct: 223 GGKQTML 229>NP_000365 Length = 367 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGKNTMMQS 9 GG +TM Q+ Sbjct: 169 GGSSTMAQA 177>NP_055833 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>NP_078997 Length = 3616 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG TMM S Sbjct: 629 GGHMTMMHS 637>NP_001186871 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 333 GEENTLMQ 340>NP_001096645 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKNTMMQS 9 G+N M+QS Sbjct: 204 GENQMLQS 211>NP_008816 Length = 3703 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG TMM S Sbjct: 656 GGHMTMMHS 664>XP_005256014 Length = 3702 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG TMM S Sbjct: 656 GGHMTMMHS 664>XP_005255192 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKNTMMQS 9 G+N M+QS Sbjct: 204 GENQMLQS 211>XP_006720913 Length = 508 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 GKNTMMQS 9 G+N M+QS Sbjct: 204 GENQMLQS 211>XP_006717822 Length = 810 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG NT + S Sbjct: 750 GGSNTQLYS 758>XP_006717821 Length = 846 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG NT + S Sbjct: 750 GGSNTQLYS 758>XP_005269749 Length = 901 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG NT + S Sbjct: 750 GGSNTQLYS 758>XP_006717820 Length = 949 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG NT + S Sbjct: 750 GGSNTQLYS 758>XP_006715464 Length = 2027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>XP_006715463 Length = 2434 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>XP_006715462 Length = 2452 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 309 GEENTLMQ 316>XP_006715461 Length = 2456 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 333 GEENTLMQ 340>XP_006715460 Length = 2465 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>XP_006715459 Length = 2475 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>XP_006715458 Length = 2476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 333 GEENTLMQ 340>XP_006715457 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>XP_006715456 Length = 2485 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GGKNTMMQ 8 G +NT+MQ Sbjct: 342 GEENTLMQ 349>XP_005271227 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGKNTMMQS 9 GG +TM Q+ Sbjct: 97 GGSSTMAQA 105>XP_005271226 Length = 295 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGKNTMMQS 9 GG +TM Q+ Sbjct: 97 GGSSTMAQA 105>NP_065081 Length = 951 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GGKNTMMQS 9 GG NT + S Sbjct: 750 GGSNTQLYS 758Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.303 0.116 0.310 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 564,173 Number of extensions: 767 Number of successful extensions: 52 Number of sequences better than 10000.0: 52 Number of HSP's gapped: 52 Number of HSP's successfully gapped: 52 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |