Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_005350 18 1482 NP_001627 17 2528 NP_001143 17 3301 NP_037518 17 4312 NP_998816 17 4312 NP_001142 17 4312 NP_112581 17 4312 NP_001740 16 5631 NP_001615 16 5631 XP_005259353 16 5631 XP_005259352 16 5631 XP_005266896 16 5631 NP_001003962 16 5631 XP_005275496 16 7355 XP_005275495 16 7355 XP_005275334 16 7355 XP_005275333 16 7355 XP_005275207 16 7355 XP_005275206 16 7355 XP_005275065 16 7355 XP_005275064 16 7355 XP_005272912 16 7355 XP_005272911 16 7355 XP_005249336 16 7355 XP_005249335 16 7355 XP_006714613 16 7355 XP_006714612 16 7355 XP_006714611 16 7355 XP_006714610 16 7355 XP_006714609 16 7355 XP_006714608 16 7355 XP_005271959 16 7355 XP_006714606 16 7355 NP_001275716 15 9605 NP_001275715 15 9605 NP_001275717 15 9605 NP_001275718 15 9605 NP_001076437 15 9605 NP_001028723 15 9605 XP_005256523 15 9605 XP_005256520 15 9605 XP_005256519 15 9605 XP_006721515 15 9605 XP_005256518 15 9605 XP_005270162 15 9605 XP_005270156 15 9605 XP_005270155 15 9605 XP_005270154 15 9605>NP_005350 Length = 552 Score = 18.1 bits (35), Expect = 1482 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GGIASAISL 9 GGIA AISL Sbjct: 476 GGIAPAISL 484>NP_001627 Length = 298 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GGIASAIS 8 GGIA+AIS Sbjct: 15 GGIAAAIS 22>NP_001143 Length = 298 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GGIASAIS 8 GG+A+AIS Sbjct: 15 GGVAAAIS 22>NP_037518 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GGIA A+S Sbjct: 201 GGIAGAVS 208>NP_998816 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GGIA A+S Sbjct: 182 GGIAGAVS 189>NP_001142 Length = 298 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGIASAIS 8 GG+A+A+S Sbjct: 15 GGVAAAVS 22>NP_112581 Length = 315 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GGIASAIS 8 GG+A+A+S Sbjct: 27 GGVAAAVS 34>NP_001740 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+ SAIS Sbjct: 63 GGVISAIS 70>NP_001615 Length = 1723 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+ASA S Sbjct: 68 GGVASAAS 75>XP_005259353 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+ SAIS Sbjct: 63 GGVISAIS 70>XP_005259352 Length = 322 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+ SAIS Sbjct: 63 GGVISAIS 70>XP_005266896 Length = 2131 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+ASA S Sbjct: 476 GGVASAAS 483>NP_001003962 Length = 268 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+ SAIS Sbjct: 63 GGVISAIS 70>XP_005275496 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275495 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275334 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275333 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275207 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275206 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275065 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005275064 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005272912 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005272911 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005249336 Length = 389 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_005249335 Length = 441 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 GGI S +SL Sbjct: 64 GGINSTVSL 72>XP_006714613 Length = 276 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_006714612 Length = 280 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_006714611 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_006714610 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_006714609 Length = 311 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_006714608 Length = 312 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_005271959 Length = 315 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>XP_006714606 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GGIASAIS 8 GG+A AIS Sbjct: 223 GGMAGAIS 230>NP_001275716 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 366 GGLASAL 372>NP_001275715 Length = 483 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 358 GGLASAL 364>NP_001275717 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 313 GGLASAL 319>NP_001275718 Length = 388 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 263 GGLASAL 269>NP_001076437 Length = 507 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 411 GGLASAL 417>NP_001028723 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 361 GGLASAL 367>XP_005256523 Length = 438 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 313 GGLASAL 319>XP_005256520 Length = 487 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 411 GGLASAL 417>XP_005256519 Length = 491 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 366 GGLASAL 372>XP_006721515 Length = 503 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 378 GGLASAL 384>XP_005256518 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GGIASAI 7 GG+ASA+ Sbjct: 411 GGLASAL 417>XP_005270162 Length = 339 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 G +AS +SL Sbjct: 19 GAVASGVSL 27>XP_005270156 Length = 476 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 G +AS +SL Sbjct: 19 GAVASGVSL 27>XP_005270155 Length = 477 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 G +AS +SL Sbjct: 19 GAVASGVSL 27>XP_005270154 Length = 481 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GGIASAISL 9 G +AS +SL Sbjct: 19 GAVASGVSL 27Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.313 0.133 0.335 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 275,295 Number of extensions: 485 Number of successful extensions: 48 Number of sequences better than 10000.0: 48 Number of HSP's gapped: 48 Number of HSP's successfully gapped: 48 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |