Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_000213 19 665 NP_001087241 19 665 XP_005265799 19 665 XP_005265798 19 665 XP_005265797 19 665 NP_065689 17 2528 NP_690051 17 3301 NP_006038 17 3301 NP_001185769 17 3301 NP_001185767 17 3301 NP_001254735 17 4312 NP_001254734 17 4312 NP_001254732 17 4312 NP_001254733 17 4312 NP_001186456 17 4312 NP_001186457 17 4312 NP_079431 17 4312 XP_005274367 17 4312 XP_005274366 17 4312 XP_005274365 17 4312 NP_001004416 17 4312 NP_775839 17 4312 NP_002040 16 5631 NP_006094 16 5631 NP_001005407 16 5631 NP_066921 16 5631 NP_001004334 16 5631 NP_004164 16 5631 XP_006724372 16 5631 XP_005261774 16 5631 XP_005261773 16 5631 XP_006721032 16 5631 XP_006721031 16 5631 XP_006721030 16 5631 XP_006721029 16 5631 XP_006721028 16 5631 XP_006721027 16 5631 XP_005255709 16 5631 XP_006721026 16 5631 NP_612455 16 5631 NP_001269558 16 7355 NP_068836 16 7355 NP_001269561 16 7355 NP_001193976 16 7355 NP_647537 16 7355 NP_647538 16 7355 XP_005260918 16 7355 XP_005260917 16 7355 NP_001269346 15 9605 NP_001006617 15 9605 NP_569732 15 9605 NP_036303 15 9605 NP_001035915 15 9605 NP_689564 15 9605 NP_001257578 15 9605 NP_001257577 15 9605 NP_001054 15 9605 NP_079007 15 9605 NP_001166932 15 9605 NP_001166933 15 9605 NP_997269 15 9605 XP_006721514 15 9605 XP_006721513 15 9605 XP_005256514 15 9605 XP_005256206 15 9605>NP_000213 Length = 976 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GFVIVAG M Sbjct: 528 GFVIVAGMM 536>NP_001087241 Length = 972 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GFVIVAG M Sbjct: 524 GFVIVAGMM 532>XP_005265799 Length = 973 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GFVIVAG M Sbjct: 525 GFVIVAGMM 533>XP_005265798 Length = 976 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GFVIVAG M Sbjct: 529 GFVIVAGMM 537>XP_005265797 Length = 977 Score = 19.2 bits (38), Expect = 665 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GFVIVAG M Sbjct: 529 GFVIVAGMM 537>NP_065689 Length = 251 Score = 17.3 bits (33), Expect = 2528 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFVIVAGTM 9 GFV++ G M Sbjct: 81 GFVVITGVM 89>NP_690051 Length = 932 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GFVIVAGTM 9 G IVAGTM Sbjct: 9 GLPIVAGTM 17>NP_006038 Length = 932 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GFVIVAGTM 9 G IVAGTM Sbjct: 9 GLPIVAGTM 17>NP_001185769 Length = 932 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GFVIVAGTM 9 G IVAGTM Sbjct: 9 GLPIVAGTM 17>NP_001185767 Length = 932 Score = 16.9 bits (32), Expect = 3301 Identities = 7/9 (77%), Positives = 7/9 (77%) Query: 1 GFVIVAGTM 9 G IVAGTM Sbjct: 9 GLPIVAGTM 17>NP_001254735 Length = 277 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 176 GFLLLAGT 183>NP_001254734 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 274 GFLLLAGT 281>NP_001254732 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 274 GFLLLAGT 281>NP_001254733 Length = 375 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 274 GFLLLAGT 281>NP_001186456 Length = 1374 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVIVAGT 8 FV+VAGT Sbjct: 1337 FVLVAGT 1343>NP_001186457 Length = 1246 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVIVAGT 8 FV+VAGT Sbjct: 1209 FVLVAGT 1215>NP_079431 Length = 392 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 291 GFLLLAGT 298>XP_005274367 Length = 256 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 155 GFLLLAGT 162>XP_005274366 Length = 256 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 155 GFLLLAGT 162>XP_005274365 Length = 343 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFVIVAGT 8 GF+++AGT Sbjct: 242 GFLLLAGT 249>NP_001004416 Length = 1318 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVIVAGT 8 FV+VAGT Sbjct: 1281 FVLVAGT 1287>NP_775839 Length = 1446 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVIVAGT 8 FV+VAGT Sbjct: 1409 FVLVAGT 1415>NP_002040 Length = 413 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GFVIVAG 7 GF++VAG Sbjct: 333 GFMVVAG 339>NP_006094 Length = 124 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFVIVAGT 8 GF +V+GT Sbjct: 21 GFTLVSGT 28>NP_001005407 Length = 2347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>NP_066921 Length = 2353 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>NP_001004334 Length = 2367 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFVIVAGTM 9 GF IV GT+ Sbjct: 455 GFAIVYGTI 463>NP_004164 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GF++ AG++ Sbjct: 318 GFIVAAGSI 326>XP_006724372 Length = 343 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GF++ AG++ Sbjct: 26 GFIVAAGSI 34>XP_005261774 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GF++ AG++ Sbjct: 318 GFIVAAGSI 326>XP_005261773 Length = 635 Score = 16.2 bits (30), Expect = 5631 Identities = 4/9 (44%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 GF++ AG++ Sbjct: 318 GFIVAAGSI 326>XP_006721032 Length = 1566 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721031 Length = 1612 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721030 Length = 1618 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721029 Length = 1820 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721028 Length = 2336 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721027 Length = 2342 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_005255709 Length = 2347 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>XP_006721026 Length = 2358 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FVIVAGTM 9 F++VAG M Sbjct: 177 FIVVAGMM 184>NP_612455 Length = 234 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FVIVAGT 8 FVIV+GT Sbjct: 124 FVIVSGT 130>NP_001269558 Length = 294 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFVIVAGT 8 GF ++AGT Sbjct: 11 GFCLLAGT 18>NP_068836 Length = 347 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFVIVAGT 8 GF ++AGT Sbjct: 11 GFCLLAGT 18>NP_001269561 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFVIVAGT 8 GF ++AGT Sbjct: 11 GFCLLAGT 18>NP_001193976 Length = 1156 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VIVAGTM 9 VIV+GTM Sbjct: 444 VIVSGTM 450>NP_647537 Length = 1429 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VIVAGTM 9 VIV+GTM Sbjct: 560 VIVSGTM 566>NP_647538 Length = 1272 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VIVAGTM 9 VIV+GTM Sbjct: 560 VIVSGTM 566>XP_005260918 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VIVAGTM 9 VIV+GTM Sbjct: 560 VIVSGTM 566>XP_005260917 Length = 1289 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 VIVAGTM 9 VIV+GTM Sbjct: 560 VIVSGTM 566>NP_001269346 Length = 566 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 495 GAVVVAGSL 503>NP_001006617 Length = 263 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FVIVAGTM 9 FV+V G M Sbjct: 67 FVVVGGVM 74>NP_569732 Length = 329 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FVIVAGTM 9 FV+V G M Sbjct: 67 FVVVGGVM 74>NP_036303 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FVIVAGTM 9 FV+V G M Sbjct: 67 FVVVGGVM 74>NP_001035915 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 525 GAVVVAGSL 533>NP_689564 Length = 612 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 541 GAVVVAGSL 549>NP_001257578 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 489 GAVVVAGSL 497>NP_001257577 Length = 569 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 498 GAVVVAGSL 506>NP_001054 Length = 698 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFVIVAG 7 GFV +AG Sbjct: 413 GFVYIAG 419>NP_079007 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GFVIVAG 7 GF+ +AG Sbjct: 345 GFIFIAG 351>NP_001166932 Length = 500 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVIVAG 7 FVIVAG Sbjct: 187 FVIVAG 192>NP_001166933 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVIVAG 7 FVIVAG Sbjct: 187 FVIVAG 192>NP_997269 Length = 551 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FVIVAG 7 FVIVAG Sbjct: 187 FVIVAG 192>XP_006721514 Length = 596 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 525 GAVVVAGSL 533>XP_006721513 Length = 598 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 527 GAVVVAGSL 535>XP_005256514 Length = 633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFVIVAGTM 9 G V+VAG++ Sbjct: 562 GAVVVAGSL 570>XP_005256206 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GFVIVAG 7 GF+ +AG Sbjct: 345 GFIFIAG 351Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.336 0.150 0.438 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 364,160 Number of extensions: 626 Number of successful extensions: 65 Number of sequences better than 10000.0: 65 Number of HSP's gapped: 65 Number of HSP's successfully gapped: 65 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.3 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |