Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_722576 20 509 XP_005262424 20 509 NP_619732 18 1135 NP_443193 18 1135 NP_001180405 18 1135 XP_006715059 18 1135 NP_060791 17 2528 NP_061119 17 4312 NP_613258 17 4312 NP_613075 17 4312 NP_001035248 17 4312 NP_001010986 17 4312 NP_775965 17 4312 NP_004884 17 4312 XP_006724816 17 4312 XP_006724815 17 4312 XP_006724814 17 4312 XP_005262462 17 4312 XP_005272192 17 4312 XP_005272191 17 4312 XP_005272189 17 4312 NP_005397 16 5631 NP_001167522 16 5631 NP_006021 16 5631 NP_001278030 16 5631 NP_001005505 16 5631 NP_004451 16 5631 NP_066363 16 5631 XP_006723899 16 5631 XP_005265638 16 5631 NP_001005284 16 5631 NP_000304 16 7355 NP_005132 16 7355 NP_001171670 16 7355 NP_000129 16 7355 NP_055383 16 7355 XP_005247683 16 7355 NP_000072 15 9605 NP_689777 15 9605 NP_060360 15 9605 NP_056058 15 9605 NP_001138890 15 9605 NP_004685 15 9605 NP_001167637 15 9605 NP_000261 15 9605 NP_699196 15 9605 NP_055401 15 9605 XP_006724234 15 9605 XP_005261462 15 9605 XP_006722232 15 9605 XP_005257846 15 9605 XP_006716574 15 9605 XP_006716573 15 9605 XP_005250858 15 9605 XP_005250857 15 9605 XP_005248199 15 9605 XP_005248198 15 9605 XP_005248197 15 9605 XP_005248196 15 9605 XP_005273087 15 9605 XP_006711794 15 9605 XP_005273086 15 9605 XP_005273085 15 9605 XP_005273084 15 9605>NP_722576 Length = 3080 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GFTVLS+RI Sbjct: 1477 GFTVLSDRI 1485>XP_005262424 Length = 2875 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GFTVLS+RI Sbjct: 1272 GFTVLSDRI 1280>NP_619732 Length = 865 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GFTV++N+I Sbjct: 212 GFTVIANKI 220>NP_443193 Length = 970 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GFTV++N+I Sbjct: 317 GFTVIANKI 325>NP_001180405 Length = 970 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GFTV++N+I Sbjct: 317 GFTVIANKI 325>XP_006715059 Length = 1042 Score = 18.5 bits (36), Expect = 1135 Identities = 6/9 (66%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GFTV++N+I Sbjct: 389 GFTVIANKI 397>NP_060791 Length = 353 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTVLSNRI 9 FT+L NRI Sbjct: 208 FTILDNRI 215>NP_061119 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GFTVLSNR 8 GFT+LS++ Sbjct: 182 GFTILSSK 189>NP_613258 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 182 GFTVLSTK 189>NP_613075 Length = 369 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 182 GFTVLSTK 189>NP_001035248 Length = 371 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 181 GFTVLSTK 188>NP_001010986 Length = 1119 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT L NR Sbjct: 512 GFTFLGNR 519>NP_775965 Length = 1132 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT L NR Sbjct: 512 GFTFLGNR 519>NP_004884 Length = 371 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 181 GFTVLSTK 188>XP_006724816 Length = 1105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_006724815 Length = 1105 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_006724814 Length = 1116 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_005262462 Length = 1129 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT L NR Sbjct: 509 GFTFLGNR 516>XP_005272192 Length = 198 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 181 GFTVLSTK 188>XP_005272191 Length = 199 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 182 GFTVLSTK 189>XP_005272189 Length = 368 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GFTVLS + Sbjct: 181 GFTVLSTK 188>NP_005397 Length = 1354 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFTVLSNR 8 GFT SNR Sbjct: 396 GFTYYSNR 403>NP_001167522 Length = 1150 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF VLSN+ Sbjct: 897 GFLVLSNQ 904>NP_006021 Length = 1143 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF VLSN+ Sbjct: 890 GFLVLSNQ 897>NP_001278030 Length = 1076 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF VLSN+ Sbjct: 821 GFLVLSNQ 828>NP_001005505 Length = 1145 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF VLSN+ Sbjct: 890 GFLVLSNQ 897>NP_004451 Length = 760 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 FTVLSNR 8 +T+LSNR Sbjct: 87 YTILSNR 93>NP_066363 Length = 1918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GF +SNRI Sbjct: 1209 GFLQISNRI 1217>XP_006723899 Length = 1918 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GF +SNRI Sbjct: 1209 GFLQISNRI 1217>XP_005265638 Length = 1144 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF VLSN+ Sbjct: 891 GFLVLSNQ 898>NP_001005284 Length = 327 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 1 GFTVLSN 7 GFTVLS+ Sbjct: 219 GFTVLSS 225>NP_000304 Length = 676 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF +LSN+ Sbjct: 189 GFVMLSNK 196>NP_005132 Length = 491 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 G+TV+ NR Sbjct: 278 GWTVIQNR 285>NP_001171670 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 G+TV+ NR Sbjct: 219 GWTVIQNR 226>NP_000129 Length = 2871 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FTVLSNRI 9 FTV+SN++ Sbjct: 187 FTVISNQM 194>NP_055383 Length = 940 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FTVLSNRI 9 FTV SNR+ Sbjct: 281 FTVNSNRL 288>XP_005247683 Length = 708 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFTVLSNR 8 GF +LSN+ Sbjct: 221 GFVMLSNK 228>NP_000072 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++L+N++ Sbjct: 2375 GFSLLANQL 2383>NP_689777 Length = 3997 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>NP_060360 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>NP_056058 Length = 863 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>NP_001138890 Length = 2481 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GFTVLSN 7 GF+++SN Sbjct: 2058 GFSIISN 2064>NP_004685 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVLSNR 8 TVLSNR Sbjct: 82 TVLSNR 87>NP_001167637 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVLSNR 8 TVLSNR Sbjct: 82 TVLSNR 87>NP_000261 Length = 289 Score = 15.4 bits (28), Expect = 9605 Identities = 3/9 (33%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++++N++ Sbjct: 237 GFSLITNKV 245>NP_699196 Length = 567 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTVLSNRI 9 FT+ NRI Sbjct: 559 FTICGNRI 566>NP_055401 Length = 714 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVLSNR 8 TVLSNR Sbjct: 365 TVLSNR 370>XP_006724234 Length = 2363 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GFTVLSN 7 GF+++SN Sbjct: 1940 GFSIISN 1946>XP_005261462 Length = 2473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GFTVLSN 7 GF+++SN Sbjct: 2050 GFSIISN 2056>XP_006722232 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVLSNR 8 TVLSNR Sbjct: 82 TVLSNR 87>XP_005257846 Length = 523 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TVLSNR 8 TVLSNR Sbjct: 82 TVLSNR 87>XP_006716574 Length = 968 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>XP_006716573 Length = 1776 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>XP_005250858 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>XP_005250857 Length = 4022 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFTVLSNRI 9 GFT L+N + Sbjct: 490 GFTYLTNSL 498>XP_005248199 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTVLSNRI 9 FT+ NRI Sbjct: 418 FTICGNRI 425>XP_005248198 Length = 426 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTVLSNRI 9 FT+ NRI Sbjct: 418 FTICGNRI 425>XP_005248197 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTVLSNRI 9 FT+ NRI Sbjct: 433 FTICGNRI 440>XP_005248196 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FTVLSNRI 9 FT+ NRI Sbjct: 433 FTICGNRI 440>XP_005273087 Length = 2788 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++L+N++ Sbjct: 2375 GFSLLANQL 2383>XP_006711794 Length = 3022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++L+N++ Sbjct: 1596 GFSLLANQL 1604>XP_005273086 Length = 3264 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++L+N++ Sbjct: 2375 GFSLLANQL 2383>XP_005273085 Length = 3755 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++L+N++ Sbjct: 2329 GFSLLANQL 2337>XP_005273084 Length = 3801 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 9/9 (100%) Query: 1 GFTVLSNRI 9 GF++L+N++ Sbjct: 2375 GFSLLANQL 2383Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.331 0.145 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 403,148 Number of extensions: 650 Number of successful extensions: 64 Number of sequences better than 10000.0: 64 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 64 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |