Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001895 20 299 NP_001091680 20 299 NP_001091679 20 299 XP_006713048 20 299 XP_006713047 20 299 XP_006713046 20 299 XP_005264943 20 299 NP_001124295 17 4312 NP_001370 17 4312 NP_003939 17 4312 XP_006722744 17 4312 XP_006714470 17 4312 XP_006714469 17 4312 XP_005263392 17 4312 NP_001265478 16 5631 NP_002601 16 5631 NP_061903 16 5631 XP_005248601 16 5631 XP_006714716 16 5631 XP_006712657 16 5631 NP_001004727 16 5631 NP_004303 16 7355 NP_001014443 16 7355 NP_036607 16 7355 NP_061963 16 7355 NP_055832 16 7355 NP_963920 16 7355 NP_963918 16 7355 XP_006724714 16 7355 XP_006711337 16 7355 XP_006711336 16 7355 XP_005270706 16 7355 XP_005270705 16 7355 NP_001018125 15 9605 NP_149075 15 9605 NP_055865 15 9605 XP_005276286 15 9605 XP_005277590 15 9605 XP_006715091 15 9605 XP_005249012 15 9605 XP_005265698 15 9605 XP_005265004 15 9605 XP_006713088 15 9605 XP_006713087 15 9605 XP_005265003 15 9605 XP_006713086 15 9605 XP_006713085 15 9605 XP_006713084 15 9605 XP_005276004 15 9605 NP_037377 15 9605>NP_001895 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 69 GFSQSFTQE 77>NP_001091680 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 69 GFSQSFTQE 77>NP_001091679 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 69 GFSQSFTQE 77>XP_006713048 Length = 720 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 69 GFSQSFTQE 77>XP_006713047 Length = 774 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 62 GFSQSFTQE 70>XP_006713046 Length = 774 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 62 GFSQSFTQE 70>XP_005264943 Length = 781 Score = 20.4 bits (41), Expect = 299 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFSQSF QE Sbjct: 69 GFSQSFTQE 77>NP_001124295 Length = 1632 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFSQSFAQ 8 GFS SFA+ Sbjct: 494 GFSTSFAE 501>NP_001370 Length = 1616 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFSQSFAQ 8 GFS SFA+ Sbjct: 478 GFSTSFAE 485>NP_003939 Length = 493 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GF++ F+QE Sbjct: 291 GFAERFSQE 299>XP_006722744 Length = 1495 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFSQSFAQ 8 GFS SFA+ Sbjct: 357 GFSTSFAE 364>XP_006714470 Length = 477 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GF++ F+QE Sbjct: 291 GFAERFSQE 299>XP_006714469 Length = 530 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GF++ F+QE Sbjct: 291 GFAERFSQE 299>XP_005263392 Length = 570 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GF++ F+QE Sbjct: 291 GFAERFSQE 299>NP_001265478 Length = 456 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFS+SF+ + Sbjct: 23 GFSRSFSSD 31>NP_002601 Length = 436 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFS+SF+ + Sbjct: 23 GFSRSFSSD 31>NP_061903 Length = 1369 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 GFSQ F ++ Sbjct: 174 GFSQEFEEQ 182>XP_005248601 Length = 899 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 GFSQ F ++ Sbjct: 174 GFSQEFEEQ 182>XP_006714716 Length = 1318 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 GFSQ F ++ Sbjct: 174 GFSQEFEEQ 182>XP_006712657 Length = 281 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFS+SF+ + Sbjct: 23 GFSRSFSSD 31>NP_001004727 Length = 303 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 1 GFSQSFAQ 8 GF SFAQ Sbjct: 144 GFMHSFAQ 151>NP_004303 Length = 388 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FSQSFA 7 FSQSFA Sbjct: 265 FSQSFA 270>NP_001014443 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 296 GYSQQDAQE 304>NP_036607 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 296 GYSQQDAQE 304>NP_061963 Length = 1047 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFSQSFAQ 8 GFS SFA+ Sbjct: 125 GFSFSFAE 132>NP_055832 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 266 GYSQQDAQE 274>NP_963920 Length = 828 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 266 GYSQQDAQE 274>NP_963918 Length = 911 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 235 GYSQQDAQE 243>XP_006724714 Length = 343 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 2 FSQSFA 7 FSQSFA Sbjct: 220 FSQSFA 225>XP_006711337 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 112 GYSQQDAQE 120>XP_006711336 Length = 386 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 296 GYSQQDAQE 304>XP_005270706 Length = 851 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 266 GYSQQDAQE 274>XP_005270705 Length = 934 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFSQSFAQE 9 G+SQ AQE Sbjct: 266 GYSQQDAQE 274>NP_001018125 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>NP_149075 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>NP_055865 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFS+SF ++ Sbjct: 761 GFSKSFKKK 769>XP_005276286 Length = 642 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 251 FSQDFAKD 258>XP_005277590 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 451 FSQDFAKD 458>XP_006715091 Length = 779 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFS+SF ++ Sbjct: 705 GFSKSFKKK 713>XP_005249012 Length = 803 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFSQSFAQE 9 GFS+SF ++ Sbjct: 761 GFSKSFKKK 769>XP_005265698 Length = 577 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 235 FSQDFAKD 242>XP_005265004 Length = 806 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 39 FSQDFAKD 46>XP_006713088 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 615 FSQDFAKD 622>XP_006713087 Length = 1432 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>XP_005265003 Length = 1451 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>XP_006713086 Length = 1458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>XP_006713085 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>XP_006713084 Length = 1471 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 704 FSQDFAKD 711>XP_005276004 Length = 584 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FSQSFAQE 9 FSQ FA++ Sbjct: 242 FSQDFAKD 249>NP_037377 Length = 437 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FSQSFAQE 9 FS+ F QE Sbjct: 429 FSEDFGQE 436Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.123 0.328 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 393,920 Number of extensions: 570 Number of successful extensions: 50 Number of sequences better than 10000.0: 50 Number of HSP's gapped: 50 Number of HSP's successfully gapped: 50 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.7 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |