Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_008835 22 134 NP_001075109 22 134 NP_057212 18 1135 NP_001371 17 2528 NP_001277152 17 2528 NP_060676 17 3301 NP_862823 17 3301 NP_036265 17 3301 NP_001276962 17 3301 XP_005256102 17 3301 NP_060395 17 4312 XP_006716870 17 4312 XP_006716869 17 4312 XP_006716868 17 4312 XP_006716867 17 4312 NP_001175 16 5631 NP_001658 16 5631 NP_001186674 16 5631 NP_940982 16 7355 NP_001073908 16 7355 NP_689525 16 7355 NP_004791 16 7355 NP_001258867 16 7355 NP_835464 16 7355 NP_001098065 16 7355 NP_001092091 16 7355 NP_065691 16 7355 NP_001401 16 7355 NP_060381 16 7355 NP_001001671 16 7355 XP_006724340 16 7355 XP_006724339 16 7355 XP_005261723 16 7355 XP_005261722 16 7355 XP_006724338 16 7355 XP_006724337 16 7355 XP_006724336 16 7355 XP_006724335 16 7355 XP_006722812 16 7355 XP_005252844 16 7355 XP_006718204 16 7355 XP_006718203 16 7355 XP_005252842 16 7355 XP_006718202 16 7355 XP_005247597 16 7355 XP_005247596 16 7355 NP_056491 16 7355 NP_079535 15 9605 NP_751898 15 9605 NP_002327 15 9605 NP_002432 15 9605 NP_751897 15 9605 NP_001258142 15 9605 NP_067022 15 9605 NP_001017979 15 9605 NP_004810 15 9605 NP_054905 15 9605 NP_612376 15 9605 NP_001153073 15 9605 NP_004240 15 9605 NP_001186797 15 9605 XP_006725123 15 9605 XP_006725122 15 9605 XP_005259343 15 9605 XP_006719141 15 9605 XP_005252714 15 9605 XP_006716744 15 9605 XP_005272410 15 9605 XP_005272409 15 9605 XP_005248274 15 9605 XP_005248272 15 9605 XP_005246333 15 9605 NP_001095123 15 9605 NP_006532 15 9605>NP_008835 Length = 4128 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFNKVVLEH 9 GFNKVVL+H Sbjct: 825 GFNKVVLKH 833>NP_001075109 Length = 4097 Score = 21.6 bits (44), Expect = 134 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GFNKVVLEH 9 GFNKVVL+H Sbjct: 825 GFNKVVLKH 833>NP_057212 Length = 874 Score = 18.5 bits (36), Expect = 1135 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FNKVVLEH 9 +N+VVLEH Sbjct: 477 YNRVVLEH 484>NP_001371 Length = 1865 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FNKVVLEH 9 F+K++LEH Sbjct: 1149 FDKILLEH 1156>NP_001277152 Length = 1886 Score = 17.3 bits (33), Expect = 2528 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 FNKVVLEH 9 F+K++LEH Sbjct: 1170 FDKILLEH 1177>NP_060676 Length = 796 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 FNK+ LEH Sbjct: 380 FNKLNLEH 387>NP_862823 Length = 384 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GF VLEH Sbjct: 325 GFGDTVLEH 333>NP_036265 Length = 871 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FNKVVLEH 9 FN+VVLE+ Sbjct: 477 FNRVVLEN 484>NP_001276962 Length = 726 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 2 FNKVVLEH 9 FN+VVLE+ Sbjct: 477 FNRVVLEN 484>XP_005256102 Length = 729 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 FNK+ LEH Sbjct: 313 FNKLNLEH 320>NP_060395 Length = 1909 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FNKVVLE 8 +NKVVLE Sbjct: 861 YNKVVLE 867>XP_006716870 Length = 1456 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FNKVVLE 8 +NKVVLE Sbjct: 359 YNKVVLE 365>XP_006716869 Length = 1722 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FNKVVLE 8 +NKVVLE Sbjct: 625 YNKVVLE 631>XP_006716868 Length = 1894 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FNKVVLE 8 +NKVVLE Sbjct: 861 YNKVVLE 867>XP_006716867 Length = 1958 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 FNKVVLE 8 +NKVVLE Sbjct: 861 YNKVVLE 867>NP_001175 Length = 2644 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV+ EH Sbjct: 2123 NKVITEH 2129>NP_001658 Length = 184 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN LEH Sbjct: 49 GFNIKTLEH 57>NP_001186674 Length = 157 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN LEH Sbjct: 49 GFNIKTLEH 57>NP_940982 Length = 646 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN +L H Sbjct: 407 GFNSRILPH 415>NP_001073908 Length = 596 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GFNKVVL 7 GF KVVL Sbjct: 88 GFRKVVL 94>NP_689525 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 FN V+ EH Sbjct: 297 FNAVIKEH 304>NP_004791 Length = 663 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GF K +EH Sbjct: 492 GFKKNAIEH 500>NP_001258867 Length = 2845 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFNKVVLEH 9 GFN+ +LE+ Sbjct: 1644 GFNQQLLEY 1652>NP_835464 Length = 692 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 FNK+ L+H Sbjct: 524 FNKLGLDH 531>NP_001098065 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 253 NKVDLEH 259>NP_001092091 Length = 169 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 +N++ LEH Sbjct: 72 YNRLALEH 79>NP_065691 Length = 259 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 +NK +LEH Sbjct: 196 WNKFLLEH 203>NP_001401 Length = 2778 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GFNKVVLEH 9 GFN+ +LE+ Sbjct: 1577 GFNQQLLEY 1585>NP_060381 Length = 357 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 253 NKVDLEH 259>NP_001001671 Length = 1313 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 F K ++EH Sbjct: 495 FKKTIIEH 502>XP_006724340 Length = 267 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 151 NKVDLEH 157>XP_006724339 Length = 310 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 194 NKVDLEH 200>XP_005261723 Length = 369 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 253 NKVDLEH 259>XP_005261722 Length = 370 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 254 NKVDLEH 260>XP_006724338 Length = 371 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 267 NKVDLEH 273>XP_006724337 Length = 372 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 268 NKVDLEH 274>XP_006724336 Length = 373 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 268 NKVDLEH 274>XP_006724335 Length = 383 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV LEH Sbjct: 267 NKVDLEH 273>XP_006722812 Length = 673 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN +L H Sbjct: 434 GFNSRILPH 442>XP_005252844 Length = 496 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 FN V+ EH Sbjct: 57 FNAVIKEH 64>XP_006718204 Length = 562 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 FN V+ EH Sbjct: 297 FNAVIKEH 304>XP_006718203 Length = 690 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 FN V+ EH Sbjct: 266 FNAVIKEH 273>XP_005252842 Length = 721 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 FN V+ EH Sbjct: 297 FNAVIKEH 304>XP_006718202 Length = 761 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 2 FNKVVLEH 9 FN V+ EH Sbjct: 297 FNAVIKEH 304>XP_005247597 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 +NK +LEH Sbjct: 181 WNKFLLEH 188>XP_005247596 Length = 244 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 +NK +LEH Sbjct: 181 WNKFLLEH 188>NP_056491 Length = 131 Score = 15.8 bits (29), Expect = 7355 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 2 FNKVVLEH 9 +N++ LEH Sbjct: 34 YNRLALEH 41>NP_079535 Length = 822 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GF K +L H Sbjct: 227 GFKKFMLTH 235>NP_751898 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GF K +L H Sbjct: 210 GFKKFMLTH 218>NP_002327 Length = 1613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFNKVVLE 8 G N++VLE Sbjct: 1133 GANRIVLE 1140>NP_002432 Length = 834 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GF K +L H Sbjct: 210 GFKKFMLTH 218>NP_751897 Length = 835 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GF K +L H Sbjct: 210 GFKKFMLTH 218>NP_001258142 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GFNKVVL 7 G+N+V+L Sbjct: 384 GYNRVIL 390>NP_067022 Length = 450 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GFNKVVL 7 G+N+V+L Sbjct: 384 GYNRVIL 390>NP_001017979 Length = 221 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NK+ LEH Sbjct: 129 NKIDLEH 135>NP_004810 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FNKVVLE 8 F KVVLE Sbjct: 664 FTKVVLE 670>NP_054905 Length = 198 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KVVLEH 9 K++LEH Sbjct: 100 KIILEH 105>NP_612376 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN + EH Sbjct: 415 GFNSHLTEH 423>NP_001153073 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NK+ LEH Sbjct: 129 NKIDLEH 135>NP_004240 Length = 220 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NK+ LEH Sbjct: 129 NKIDLEH 135>NP_001186797 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFNKVVLE 8 GF+K +LE Sbjct: 262 GFSKQILE 269>XP_006725123 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN + EH Sbjct: 415 GFNSHLTEH 423>XP_006725122 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN + EH Sbjct: 415 GFNSHLTEH 423>XP_005259343 Length = 1274 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 FNKVVLE 8 F KVVLE Sbjct: 664 FTKVVLE 670>XP_006719141 Length = 1613 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFNKVVLE 8 G N++VLE Sbjct: 1133 GANRIVLE 1140>XP_005252714 Length = 189 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFNKVVLE 8 GF+K +LE Sbjct: 116 GFSKQILE 123>XP_006716744 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN + EH Sbjct: 415 GFNSHLTEH 423>XP_005272410 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN + EH Sbjct: 415 GFNSHLTEH 423>XP_005272409 Length = 671 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GFNKVVLEH 9 GFN + EH Sbjct: 415 GFNSHLTEH 423>XP_005248274 Length = 194 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NK+ LEH Sbjct: 129 NKIDLEH 135>XP_005248272 Length = 204 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NK+ LEH Sbjct: 129 NKIDLEH 135>XP_005246333 Length = 1637 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 3 NKVVLEH 9 NKV+ EH Sbjct: 1628 NKVMTEH 1634>NP_001095123 Length = 156 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 4 KVVLEH 9 K++LEH Sbjct: 58 KIILEH 63>NP_006532 Length = 335 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFNKVVLE 8 GF+K +LE Sbjct: 262 GFSKQILE 269Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.145 0.435 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 528,759 Number of extensions: 1195 Number of successful extensions: 74 Number of sequences better than 10000.0: 74 Number of HSP's gapped: 74 Number of HSP's successfully gapped: 74 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |