Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_036462 21 229 NP_001243397 21 229 NP_001092882 21 229 NP_006757 21 229 NP_001092883 21 229 XP_005269721 21 229 XP_005273706 21 229 NP_065802 17 2528 NP_001138551 17 2528 NP_001140171 17 3301 NP_001140170 17 3301 NP_057280 17 3301 NP_056271 17 4312 NP_009007 17 4312 NP_001273001 16 5631 NP_001123551 16 5631 NP_997304 16 5631 NP_066014 16 5631 XP_006710707 16 5631 XP_005270926 16 5631 XP_005270927 16 5631 XP_005270925 16 5631 NP_001104026 16 7355 NP_001447 16 7355 NP_114113 16 7355 NP_037450 16 7355 NP_004450 16 7355 NP_872579 16 7355 XP_005257219 16 7355 XP_005257218 16 7355 XP_005257217 16 7355 XP_005257216 16 7355 XP_005257215 16 7355 XP_005257214 16 7355 XP_005257213 16 7355 XP_005257212 16 7355 XP_006721834 16 7355 XP_005257211 16 7355 XP_005257210 16 7355 XP_005257209 16 7355 XP_005257208 16 7355 XP_006721833 16 7355 XP_005257207 16 7355 NP_001139110 15 9605 NP_001018048 15 9605 NP_056001 15 9605 NP_001018047 15 9605 NP_150648 15 9605 NP_060619 15 9605 NP_055970 15 9605 NP_002220 15 9605 NP_056069 15 9605 NP_056163 15 9605 NP_001136430 15 9605 NP_116019 15 9605 NP_001014305 15 9605 NP_001482 15 9605 XP_006720038 15 9605 XP_005268377 15 9605 XP_005268378 15 9605 XP_006720037 15 9605 XP_006717499 15 9605 XP_005252492 15 9605 XP_005252490 15 9605 XP_005252489 15 9605 XP_005252488 15 9605 XP_006716380 15 9605 XP_006716379 15 9605 XP_005273516 15 9605 XP_005273515 15 9605 XP_006715118 15 9605 XP_005249054 15 9605 XP_005263969 15 9605 XP_005263968 15 9605 XP_005263967 15 9605 XP_005263966 15 9605>NP_036462 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 433 GLIDGLTKF 441>NP_001243397 Length = 1890 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 433 GLIDGLTKF 441>NP_001092882 Length = 2004 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 408 GLIDGLTKF 416>NP_006757 Length = 2004 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 408 GLIDGLTKF 416>NP_001092883 Length = 2004 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 408 GLIDGLTKF 416>XP_005269721 Length = 2073 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 433 GLIDGLTKF 441>XP_005273706 Length = 1997 Score = 20.8 bits (42), Expect = 229 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GFIDGLTKF 9 G IDGLTKF Sbjct: 401 GLIDGLTKF 409>NP_065802 Length = 657 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GFID LT+ Sbjct: 280 GFIDALTR 287>NP_001138551 Length = 615 Score = 17.3 bits (33), Expect = 2528 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GFID LT+ Sbjct: 280 GFIDALTR 287>NP_001140171 Length = 960 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GF+D LTK Sbjct: 877 GFVDFLTK 884>NP_001140170 Length = 960 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GF+D LTK Sbjct: 877 GFVDFLTK 884>NP_057280 Length = 960 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GF+D LTK Sbjct: 877 GFVDFLTK 884>NP_056271 Length = 580 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GF+DG+ K Sbjct: 285 GFLDGVKK 292>NP_009007 Length = 458 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FIDGLTKF 9 F+D LT+F Sbjct: 139 FVDALTEF 146>NP_001273001 Length = 947 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 381 FVDGLT 386>NP_001123551 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 437 FVDGLT 442>NP_997304 Length = 694 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GF+D +TK Sbjct: 327 GFVDTVTK 334>NP_066014 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 437 FVDGLT 442>XP_006710707 Length = 898 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 437 FVDGLT 442>XP_005270926 Length = 947 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 381 FVDGLT 386>XP_005270927 Length = 947 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 381 FVDGLT 386>XP_005270925 Length = 1003 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 F+DGLT Sbjct: 437 FVDGLT 442>NP_001104026 Length = 2647 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FIDGLTK 8 F+D LTK Sbjct: 2534 FVDSLTK 2540>NP_001447 Length = 2639 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FIDGLTK 8 F+D LTK Sbjct: 2526 FVDSLTK 2532>NP_114113 Length = 913 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFIDGLTKF 9 G+ DG TK+ Sbjct: 271 GYSDGYTKW 279>NP_037450 Length = 2229 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GFIDGLTK 8 GFI+ LTK Sbjct: 1561 GFIEVLTK 1568>NP_004450 Length = 2903 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>NP_872579 Length = 2920 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257219 Length = 2038 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257218 Length = 2957 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257217 Length = 2961 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257216 Length = 3015 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257215 Length = 3032 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257214 Length = 3094 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257213 Length = 3095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257212 Length = 3095 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_006721834 Length = 3100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257211 Length = 3100 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257210 Length = 3104 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257209 Length = 3148 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257208 Length = 3157 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_006721833 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>XP_005257207 Length = 3158 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FIDGLT 7 FIDG+T Sbjct: 320 FIDGMT 325>NP_001139110 Length = 675 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 6/8 (75%) Query: 2 FIDGLTKF 9 F D LTKF Sbjct: 498 FFDLLTKF 505>NP_001018048 Length = 3069 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GF+ G+T Sbjct: 2970 GFVSGIT 2976>NP_056001 Length = 3095 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GF+ G+T Sbjct: 2970 GFVSGIT 2976>NP_001018047 Length = 3135 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GF+ G+T Sbjct: 2931 GFVSGIT 2937>NP_150648 Length = 3174 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GF+ G+T Sbjct: 2970 GFVSGIT 2976>NP_060619 Length = 991 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFIDGLTKF 9 GF+D TKF Sbjct: 487 GFLDIDTKF 495>NP_055970 Length = 738 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GFI+G T Sbjct: 383 GFINGFT 389>NP_002220 Length = 347 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 5/8 (62%) Query: 1 GFIDGLTK 8 GF DG K Sbjct: 134 GFADGFVK 141>NP_056069 Length = 1826 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 ++DGL+K Sbjct: 182 YVDGLSK 188>NP_056163 Length = 1883 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GFIDGLTK 8 GF++GL++ Sbjct: 915 GFMEGLSR 922>NP_001136430 Length = 510 Score = 15.4 bits (28), Expect = 9605 Identities = 4/6 (66%), Positives = 6/6 (100%) Query: 1 GFIDGL 6 GF+DG+ Sbjct: 72 GFLDGM 77>NP_116019 Length = 212 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 IDGLTK 8 +DGLTK Sbjct: 99 LDGLTK 104>NP_001014305 Length = 259 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 F+DG+T+ Sbjct: 122 FLDGMTE 128>NP_001482 Length = 400 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FIDGLTKF 9 FI+G T+F Sbjct: 51 FINGKTRF 58>XP_006720038 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 F+DG+T+ Sbjct: 107 FLDGMTE 113>XP_005268377 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 F+DG+T+ Sbjct: 107 FLDGMTE 113>XP_005268378 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 F+DG+T+ Sbjct: 107 FLDGMTE 113>XP_006720037 Length = 244 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 F+DG+T+ Sbjct: 107 FLDGMTE 113>XP_006717499 Length = 616 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GFI+G T Sbjct: 226 GFINGFT 232>XP_005252492 Length = 650 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GFI+G T Sbjct: 260 GFINGFT 266>XP_005252490 Length = 761 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GFI+G T Sbjct: 406 GFINGFT 412>XP_005252489 Length = 773 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GFI+G T Sbjct: 383 GFINGFT 389>XP_005252488 Length = 796 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFIDGLT 7 GFI+G T Sbjct: 406 GFINGFT 412>XP_006716380 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 ++DGL+K Sbjct: 118 YVDGLSK 124>XP_006716379 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 ++DGL+K Sbjct: 118 YVDGLSK 124>XP_005273516 Length = 1762 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 ++DGL+K Sbjct: 118 YVDGLSK 124>XP_005273515 Length = 1805 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 2 FIDGLTK 8 ++DGL+K Sbjct: 182 YVDGLSK 188>XP_006715118 Length = 311 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FIDGLTKF 9 FI+G T+F Sbjct: 51 FINGKTRF 58>XP_005249054 Length = 363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FIDGLTKF 9 FI+G T+F Sbjct: 51 FINGKTRF 58>XP_005263969 Length = 1844 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GFIDGLTK 8 GF++GL++ Sbjct: 876 GFMEGLSR 883>XP_005263968 Length = 1861 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GFIDGLTK 8 GF++GL++ Sbjct: 893 GFMEGLSR 900>XP_005263967 Length = 1899 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GFIDGLTK 8 GF++GL++ Sbjct: 932 GFMEGLSR 939>XP_005263966 Length = 1900 Score = 15.4 bits (28), Expect = 9605 Identities = 4/8 (50%), Positives = 8/8 (100%) Query: 1 GFIDGLTK 8 GF++GL++ Sbjct: 932 GFMEGLSR 939Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.334 0.163 0.514 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 444,038 Number of extensions: 611 Number of successful extensions: 76 Number of sequences better than 10000.0: 76 Number of HSP's gapped: 76 Number of HSP's successfully gapped: 76 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |