Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_208382 18 1135 NP_001156806 17 2528 NP_620135 17 2528 NP_001156807 17 2528 NP_002358 17 3301 NP_003314 17 3301 XP_006723412 17 3301 XP_006723411 17 3301 XP_006723410 17 3301 XP_006723409 17 3301 XP_006723408 17 3301 NP_055898 17 4312 NP_057591 17 4312 XP_005257515 17 4312 XP_005257513 17 4312 NP_722540 16 5631 NP_002608 16 5631 NP_001243224 16 7355 NP_005230 16 7355 NP_976225 16 7355 NP_062552 16 7355 NP_005446 16 7355 NP_060564 16 7355 NP_001123479 16 7355 NP_001123478 16 7355 NP_002085 16 7355 XP_005260992 16 7355 XP_005255332 16 7355 XP_005255331 16 7355 NP_057641 15 9605 NP_001120704 15 9605 NP_056385 15 9605 NP_001120703 15 9605 NP_848540 15 9605 NP_001278086 15 9605 NP_001181876 15 9605 NP_937887 15 9605 NP_937884 15 9605 NP_004944 15 9605 NP_001181875 15 9605 NP_937885 15 9605 NP_886553 15 9605 NP_001231293 15 9605 NP_660350 15 9605 NP_001269870 15 9605 NP_002356 15 9605 NP_001231514 15 9605 NP_001073948 15 9605 NP_001120926 15 9605 NP_001120925 15 9605 NP_001185731 15 9605 NP_001185730 15 9605 NP_004394 15 9605 NP_003751 15 9605 NP_001231513 15 9605 NP_001171164 15 9605 NP_001257572 15 9605 NP_057103 15 9605 XP_005274567 15 9605 XP_005261469 15 9605 XP_006717758 15 9605 XP_006715983 15 9605 XP_005248625 15 9605 XP_006714732 15 9605 XP_006709999 15 9605 NP_055107 15 9605>NP_208382 Length = 648 Score = 18.5 bits (36), Expect = 1135 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GFEKKQRTR 9 GFEK +RTR Sbjct: 283 GFEKLRRTR 291>NP_001156806 Length = 752 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GFEKKQRT 8 G EKKQRT Sbjct: 458 GDEKKQRT 465>NP_620135 Length = 730 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GFEKKQRT 8 G EKKQRT Sbjct: 436 GDEKKQRT 443>NP_001156807 Length = 730 Score = 17.3 bits (33), Expect = 2528 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GFEKKQRT 8 G EKKQRT Sbjct: 436 GDEKKQRT 443>NP_002358 Length = 346 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+QRTR Sbjct: 13 EKRQRTR 19>NP_003314 Length = 520 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FEKKQR + Sbjct: 32 FEKKQRQK 39>XP_006723412 Length = 512 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FEKKQR + Sbjct: 46 FEKKQRQK 53>XP_006723411 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FEKKQR + Sbjct: 32 FEKKQRQK 39>XP_006723410 Length = 531 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FEKKQR + Sbjct: 32 FEKKQRQK 39>XP_006723409 Length = 542 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FEKKQR + Sbjct: 46 FEKKQRQK 53>XP_006723408 Length = 545 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FEKKQR + Sbjct: 46 FEKKQRQK 53>NP_055898 Length = 1481 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+QRTR Sbjct: 657 EKEQRTR 663>NP_057591 Length = 1490 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+QRTR Sbjct: 657 EKEQRTR 663>XP_005257515 Length = 1256 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+QRTR Sbjct: 657 EKEQRTR 663>XP_005257513 Length = 1489 Score = 16.5 bits (31), Expect = 4312 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+QRTR Sbjct: 656 EKEQRTR 662>NP_722540 Length = 346 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GF ++QR R Sbjct: 258 GFRQRQRAR 266>NP_002608 Length = 326 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GF ++QR R Sbjct: 238 GFRQRQRAR 246>NP_001243224 Length = 609 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GFEKKQR 7 GF+K+QR Sbjct: 229 GFKKEQR 235>NP_005230 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GFEKKQR 7 GF+K+QR Sbjct: 89 GFKKEQR 95>NP_976225 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 G KK+RTR Sbjct: 296 GDRKKRRTR 304>NP_062552 Length = 689 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GFEKKQR 7 GF+K+QR Sbjct: 405 GFKKQQR 411>NP_005446 Length = 320 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 G KK+RTR Sbjct: 296 GDRKKRRTR 304>NP_060564 Length = 628 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GFEK +TR Sbjct: 322 GFEKGGQTR 330>NP_001123479 Length = 499 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GFEK +TR Sbjct: 193 GFEKGGQTR 201>NP_001123478 Length = 636 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GFEK +TR Sbjct: 330 GFEKGGQTR 338>NP_002085 Length = 637 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GFEK +TR Sbjct: 331 GFEKGGQTR 339>XP_005260992 Length = 469 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GFEKKQR 7 GF+K+QR Sbjct: 89 GFKKEQR 95>XP_005255332 Length = 529 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GFEK +TR Sbjct: 223 GFEKGGQTR 231>XP_005255331 Length = 530 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 GFEK +TR Sbjct: 224 GFEKGGQTR 232>NP_057641 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 + KKQRT+ Sbjct: 68 YYKKQRTK 75>NP_001120704 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 G KK+R+R Sbjct: 9 GLRKKRRSR 17>NP_056385 Length = 1259 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 G KK+R+R Sbjct: 9 GLRKKRRSR 17>NP_001120703 Length = 1235 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 G KK+R+R Sbjct: 9 GLRKKRRSR 17>NP_848540 Length = 350 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 + KKQRT+ Sbjct: 68 YYKKQRTK 75>NP_001278086 Length = 1559 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 821 FEKKQK 826>NP_001181876 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 868 FEKKQK 873>NP_937887 Length = 1512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 774 FEKKQK 779>NP_937884 Length = 1599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 861 FEKKQK 866>NP_004944 Length = 1404 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 666 FEKKQK 671>NP_001181875 Length = 1606 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 868 FEKKQK 873>NP_937885 Length = 1435 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 697 FEKKQK 702>NP_886553 Length = 1600 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 862 FEKKQK 867>NP_001231293 Length = 1392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFEKKQ 6 GFEK+Q Sbjct: 151 GFEKEQ 156>NP_660350 Length = 609 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FEKKQRT 8 FE K+RT Sbjct: 90 FESKERT 96>NP_001269870 Length = 163 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FEKKQRT 8 FE K+RT Sbjct: 90 FESKERT 96>NP_002356 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+Q+TR Sbjct: 13 EKRQQTR 19>NP_001231514 Length = 389 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 E+K+RTR Sbjct: 284 ERKRRTR 290>NP_001073948 Length = 1731 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFEKKQ 6 GFEK+Q Sbjct: 464 GFEKEQ 469>NP_001120926 Length = 332 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFEKKQR 7 GFE K+R Sbjct: 79 GFENKKR 85>NP_001120925 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFEKKQR 7 GFE K+R Sbjct: 243 GFENKKR 249>NP_001185731 Length = 1591 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 861 FEKKQK 866>NP_001185730 Length = 1621 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 891 FEKKQK 896>NP_004394 Length = 496 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GFEKKQR 7 GFE K+R Sbjct: 243 GFENKKR 249>NP_003751 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 FEKKQR 7 FEKKQ+ Sbjct: 855 FEKKQK 860>NP_001231513 Length = 458 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 E+K+RTR Sbjct: 353 ERKRRTR 359>NP_001171164 Length = 1705 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFEKKQ 6 GFEK+Q Sbjct: 464 GFEKEQ 469>NP_001257572 Length = 391 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 E+K+RTR Sbjct: 286 ERKRRTR 292>NP_057103 Length = 392 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 E+K+RTR Sbjct: 287 ERKRRTR 293>XP_005274567 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 EKKQRTR 9 EK+Q+TR Sbjct: 13 EKRQQTR 19>XP_005261469 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FE+K+R R Sbjct: 57 FEQKERER 64>XP_006717758 Length = 630 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 FEKKQRT 8 FE K+RT Sbjct: 90 FESKERT 96>XP_006715983 Length = 242 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GFEKKQRTR 9 G KK+R+R Sbjct: 9 GLRKKRRSR 17>XP_005248625 Length = 1418 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFEKKQ 6 GFEK+Q Sbjct: 151 GFEKEQ 156>XP_006714732 Length = 1633 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GFEKKQ 6 GFEK+Q Sbjct: 366 GFEKEQ 371>XP_006709999 Length = 266 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GFEKKQR 7 GF+++QR Sbjct: 16 GFDRRQR 22>NP_055107 Length = 412 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 FEKKQRTR 9 FE+K+R R Sbjct: 57 FEQKERER 64Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.318 0.133 0.369 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 694,863 Number of extensions: 1404 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |