Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001268421 20 509 NP_000170 20 509 NP_001268422 20 509 NP_001268423 20 509 XP_005264328 20 509 NP_001139669 18 1935 NP_001191448 17 4312 NP_002552 17 4312 NP_998771 16 7355 NP_056392 16 7355 NP_055211 16 7355 NP_001138997 16 7355 NP_001138995 16 7355 NP_001138994 16 7355 NP_001138993 16 7355 NP_001138992 16 7355 XP_006714532 16 7355 NP_115511 16 7355 NP_542198 16 7355 NP_001121093 15 9605 NP_000394 15 9605 NP_001008217 15 9605 NP_057313 15 9605 NP_001269665 15 9605 NP_116201 15 9605 NP_001273428 15 9605 NP_001273425 15 9605 NP_079325 15 9605 NP_005437 15 9605 NP_001153026 15 9605 NP_001273426 15 9605 XP_006724432 15 9605 XP_005261876 15 9605 XP_005253033 15 9605 XP_006718315 15 9605 XP_005253032 15 9605 XP_006718314 15 9605 XP_005253031 15 9605 XP_006718313 15 9605 XP_005253030 15 9605>NP_001268421 Length = 1230 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GESIFFVEL 9 GES FFVEL Sbjct: 1056 GESTFFVEL 1064>NP_000170 Length = 1360 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GESIFFVEL 9 GES FFVEL Sbjct: 1186 GESTFFVEL 1194>NP_001268422 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GESIFFVEL 9 GES FFVEL Sbjct: 884 GESTFFVEL 892>NP_001268423 Length = 1058 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GESIFFVEL 9 GES FFVEL Sbjct: 884 GESTFFVEL 892>XP_005264328 Length = 1261 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GESIFFVEL 9 GES FFVEL Sbjct: 1087 GESTFFVEL 1095>NP_001139669 Length = 7081 Score = 17.7 bits (34), Expect = 1935 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GESIFFVEL 9 G++IFF EL Sbjct: 3000 GQNIFFTEL 3008>NP_001191448 Length = 421 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GE++FFV Sbjct: 97 GENVFFV 103>NP_002552 Length = 422 Score = 16.5 bits (31), Expect = 4312 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GE++FFV Sbjct: 97 GENVFFV 103>NP_998771 Length = 516 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 SIFFVE 8 SIFFVE Sbjct: 70 SIFFVE 75>NP_056392 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 303 ESVFFAE 309>NP_055211 Length = 854 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GES+F++ Sbjct: 342 GESLFYI 348>NP_001138997 Length = 983 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 306 ESVFFAE 312>NP_001138995 Length = 972 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 295 ESVFFAE 301>NP_001138994 Length = 951 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 274 ESVFFAE 280>NP_001138993 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 303 ESVFFAE 309>NP_001138992 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 303 ESVFFAE 309>XP_006714532 Length = 980 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 ESIFFVE 8 ES+FF E Sbjct: 303 ESVFFAE 309>NP_115511 Length = 825 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ESIFFVEL 9 ES+F +EL Sbjct: 811 ESVFHIEL 818>NP_542198 Length = 829 Score = 15.8 bits (29), Expect = 7355 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GES+F++ Sbjct: 317 GESLFYI 323>NP_001121093 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GESIFFVE 8 G+S FF+E Sbjct: 158 GKSKFFIE 165>NP_000394 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GESIFFVE 8 G+S FF+E Sbjct: 158 GKSKFFIE 165>NP_001008217 Length = 348 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GESIFFVE 8 G+S FF+E Sbjct: 158 GKSKFFIE 165>NP_057313 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 112 GETIFF 117>NP_001269665 Length = 480 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIFFVE 8 SIFF+E Sbjct: 437 SIFFIE 442>NP_116201 Length = 529 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 SIFFVE 8 SIFF+E Sbjct: 486 SIFFIE 491>NP_001273428 Length = 588 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 G+SIFF Sbjct: 168 GQSIFF 173>NP_001273425 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 G+SIFF Sbjct: 221 GQSIFF 226>NP_079325 Length = 641 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 G+SIFF Sbjct: 221 GQSIFF 226>NP_005437 Length = 441 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GE++FF+ Sbjct: 106 GENVFFL 112>NP_001153026 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GE++FF+ Sbjct: 80 GENVFFL 86>NP_001273426 Length = 707 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 G+SIFF Sbjct: 221 GQSIFF 226>XP_006724432 Length = 447 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GE++FF+ Sbjct: 80 GENVFFL 86>XP_005261876 Length = 473 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GESIFFV 7 GE++FF+ Sbjct: 106 GENVFFL 112>XP_005253033 Length = 258 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 172 GETIFF 177>XP_006718315 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 112 GETIFF 117>XP_005253032 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 112 GETIFF 117>XP_006718314 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 112 GETIFF 117>XP_005253031 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 112 GETIFF 117>XP_006718313 Length = 276 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 112 GETIFF 117>XP_005253030 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GESIFF 6 GE+IFF Sbjct: 172 GETIFF 177Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.155 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 435,679 Number of extensions: 660 Number of successful extensions: 40 Number of sequences better than 10000.0: 40 Number of HSP's gapped: 40 Number of HSP's successfully gapped: 40 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.0 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |