Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_006197 20 390 XP_006714104 20 390 XP_005265800 20 390 XP_006714103 20 390 XP_006714102 20 390 NP_002178 19 665 NP_003250 19 665 NP_001186566 18 1935 NP_001109 18 1935 NP_001186564 18 1935 NP_001186565 18 1935 XP_006715710 18 1935 XP_006715709 18 1935 XP_006715708 18 1935 NP_000177 17 4312 NP_075556 17 4312 XP_006723675 17 4312 XP_006723674 17 4312 XP_006723673 17 4312 XP_006711345 17 4312 NP_003732 16 5631 XP_005247908 16 5631 XP_005247907 16 5631 XP_005247906 16 5631 XP_005247905 16 5631 NP_001123561 16 7355 NP_005539 16 7355 XP_006720785 16 7355 NP_115821 16 7355 NP_001243474 15 9605 NP_060952 15 9605 NP_115822 15 9605 NP_001137139 15 9605 NP_067034 15 9605 NP_001234925 15 9605 XP_006717378 15 9605 XP_006716630 15 9605 XP_006716629 15 9605 XP_006716628 15 9605 XP_006716627 15 9605 XP_006716626 15 9605 XP_005250982 15 9605 NP_848543 15 9605>NP_006197 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GEMIVVTCA 9 GE IVVTCA Sbjct: 228 GETIVVTCA 236>XP_006714104 Length = 832 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GEMIVVTCA 9 GE IVVTCA Sbjct: 253 GETIVVTCA 261>XP_005265800 Length = 1089 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GEMIVVTCA 9 GE IVVTCA Sbjct: 228 GETIVVTCA 236>XP_006714103 Length = 1111 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GEMIVVTCA 9 GE IVVTCA Sbjct: 250 GETIVVTCA 258>XP_006714102 Length = 1114 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GEMIVVTCA 9 GE IVVTCA Sbjct: 253 GETIVVTCA 261>NP_002178 Length = 328 Score = 19.2 bits (38), Expect = 665 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM+V+TC Sbjct: 43 GEMVVLTC 50>NP_003250 Length = 924 Score = 19.2 bits (38), Expect = 665 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GEMIVVTCA 9 G+M+ VTCA Sbjct: 337 GQMVTVTCA 345>NP_001186566 Length = 447 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_001109 Length = 468 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_001186564 Length = 496 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_001186565 Length = 495 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>XP_006715710 Length = 475 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>XP_006715709 Length = 489 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>XP_006715708 Length = 496 Score = 17.7 bits (34), Expect = 1935 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GEMIVVTC 8 GEM++V+C Sbjct: 70 GEMVLVSC 77>NP_000177 Length = 1231 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEMIVVTCA 9 GE + TCA Sbjct: 1011 GEQVTYTCA 1019>NP_075556 Length = 1709 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GEMIVVTC 8 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_006723675 Length = 1623 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GEMIVVTC 8 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_006723674 Length = 1701 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GEMIVVTC 8 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_006723673 Length = 1709 Score = 16.5 bits (31), Expect = 4312 Identities = 4/8 (50%), Positives = 7/8 (87%) Query: 1 GEMIVVTC 8 GE++ +TC Sbjct: 255 GELVTLTC 262>XP_006711345 Length = 1173 Score = 16.5 bits (31), Expect = 4312 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GEMIVVTCA 9 GE + TCA Sbjct: 953 GEQVTYTCA 961>NP_003732 Length = 955 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GEM +TC Sbjct: 893 GEMSCITC 900>XP_005247908 Length = 894 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GEM +TC Sbjct: 832 GEMSCITC 839>XP_005247907 Length = 954 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GEM +TC Sbjct: 893 GEMSCITC 900>XP_005247906 Length = 981 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GEM +TC Sbjct: 920 GEMSCITC 927>XP_005247905 Length = 982 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GEM +TC Sbjct: 920 GEMSCITC 927>NP_001123561 Length = 625 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GE + VTC Sbjct: 477 GEFLEVTC 484>NP_005539 Length = 597 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GEMIVVTC 8 GE + VTC Sbjct: 449 GEFLEVTC 456>XP_006720785 Length = 1079 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GEMIVVTCA 9 GE+ V+CA Sbjct: 369 GEVCAVSCA 377>NP_115821 Length = 1044 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GEMIVVTCA 9 GE+ V+CA Sbjct: 430 GEVCAVSCA 438>NP_001243474 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GEMIVVTCA 9 GEM V CA Sbjct: 102 GEMCVPHCA 110>NP_060952 Length = 1129 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1091 GEVIIVT 1097>NP_115822 Length = 1140 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 6/9 (66%) Query: 1 GEMIVVTCA 9 GEM V CA Sbjct: 102 GEMCVPHCA 110>NP_001137139 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GEMIVVTCA 9 GE+++ CA Sbjct: 214 GELLIKPCA 222>NP_067034 Length = 693 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 7/9 (77%) Query: 1 GEMIVVTCA 9 GE+++ CA Sbjct: 214 GELLIKPCA 222>NP_001234925 Length = 1122 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1084 GEVIIVT 1090>XP_006717378 Length = 355 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GEMIVVTCA 9 GE++ CA Sbjct: 303 GELLAAACA 311>XP_006716630 Length = 1073 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1035 GEVIIVT 1041>XP_006716629 Length = 1075 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1037 GEVIIVT 1043>XP_006716628 Length = 1076 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1038 GEVIIVT 1044>XP_006716627 Length = 1125 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1087 GEVIIVT 1093>XP_006716626 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1094 GEVIIVT 1100>XP_005250982 Length = 1132 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GEMIVVT 7 GE+I+VT Sbjct: 1094 GEVIIVT 1100>NP_848543 Length = 394 Score = 15.4 bits (28), Expect = 9605 Identities = 4/9 (44%), Positives = 6/9 (66%) Query: 1 GEMIVVTCA 9 GE++ CA Sbjct: 303 GELLAAACA 311Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.330 0.137 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 441,844 Number of extensions: 761 Number of successful extensions: 43 Number of sequences better than 10000.0: 43 Number of HSP's gapped: 43 Number of HSP's successfully gapped: 43 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |