Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_115927 20 509 NP_001239155 17 4312 NP_006613 17 4312 NP_001099001 17 4312 NP_065870 17 4312 NP_001156001 17 4312 XP_005248807 17 4312 XP_005248805 17 4312 XP_005248804 17 4312 XP_005248803 17 4312 XP_005248802 17 4312 XP_005248801 17 4312 XP_005248800 17 4312 NP_009118 16 5631 NP_002953 16 5631 XP_005266302 16 5631 XP_005245487 16 5631 XP_005245486 16 5631 NP_001014443 16 7355 NP_036607 16 7355 NP_003244 16 7355 NP_689417 16 7355 XP_005261097 16 7355 XP_005261096 16 7355 XP_005261095 16 7355 XP_005261094 16 7355 XP_006720248 16 7355 XP_005267848 16 7355 XP_006711337 16 7355 NP_060413 16 7355 NP_001269973 15 9605 NP_065076 15 9605 NP_689976 15 9605 NP_055062 15 9605 NP_055805 15 9605 NP_001269972 15 9605 NP_919277 15 9605 XP_006723662 15 9605 XP_005260825 15 9605 XP_006723661 15 9605 XP_006720343 15 9605 XP_006720167 15 9605 XP_006720166 15 9605 XP_005267550 15 9605 XP_005267549 15 9605 XP_005267548 15 9605 XP_006720165 15 9605 XP_006720164 15 9605 XP_006720163 15 9605 XP_006720162 15 9605 XP_006720161 15 9605 XP_006714485 15 9605 XP_005263418 15 9605 XP_005263417 15 9605 XP_006714484 15 9605 XP_005263416 15 9605 XP_006714483 15 9605 XP_005263415 15 9605>NP_115927 Length = 1321 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDMKKSSVT 9 GDMKKS VT Sbjct: 842 GDMKKSPVT 850>NP_001239155 Length = 671 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DMKKSSVT 9 D+KK+S+T Sbjct: 387 DLKKTSIT 394>NP_006613 Length = 685 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DMKKSSVT 9 D+KK+S+T Sbjct: 401 DLKKTSIT 408>NP_001099001 Length = 1319 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 688 DTKKSSIT 695>NP_065870 Length = 1302 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 671 DTKKSSIT 678>NP_001156001 Length = 1515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 884 DTKKSSIT 891>XP_005248807 Length = 1182 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 551 DTKKSSIT 558>XP_005248805 Length = 1345 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 714 DTKKSSIT 721>XP_005248804 Length = 1378 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 747 DTKKSSIT 754>XP_005248803 Length = 1455 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 824 DTKKSSIT 831>XP_005248802 Length = 1515 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 884 DTKKSSIT 891>XP_005248801 Length = 1541 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 910 DTKKSSIT 917>XP_005248800 Length = 1541 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 DMKKSSVT 9 D KKSS+T Sbjct: 910 DTKKSSIT 917>NP_009118 Length = 376 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GDMKKSSV 8 GD+KK++V Sbjct: 158 GDLKKTAV 165>NP_002953 Length = 92 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GDMKKSSV 8 G+MK+SS+ Sbjct: 45 GEMKESSI 52>XP_005266302 Length = 407 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GDMKKSSV 8 GD+KK++V Sbjct: 189 GDLKKTAV 196>XP_005245487 Length = 110 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GDMKKSSV 8 G+MK+SS+ Sbjct: 63 GEMKESSI 70>XP_005245486 Length = 133 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 1 GDMKKSSV 8 G+MK+SS+ Sbjct: 86 GEMKESSI 93>NP_001014443 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 G +KKSSV Sbjct: 471 GSIKKSSV 478>NP_036607 Length = 565 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 G +KKSSV Sbjct: 471 GSIKKSSV 478>NP_003244 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GDMKKSSVT 9 G+M+ SSVT Sbjct: 584 GEMQLSSVT 592>NP_689417 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 GD+KK+ V Sbjct: 155 GDLKKAKV 162>XP_005261097 Length = 1452 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GDMKKSSVT 9 G+M+ SSVT Sbjct: 584 GEMQLSSVT 592>XP_005261096 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GDMKKSSVT 9 G+M+ SSVT Sbjct: 584 GEMQLSSVT 592>XP_005261095 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GDMKKSSVT 9 G+M+ SSVT Sbjct: 584 GEMQLSSVT 592>XP_005261094 Length = 1591 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GDMKKSSVT 9 G+M+ SSVT Sbjct: 584 GEMQLSSVT 592>XP_006720248 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 GD+KK+ V Sbjct: 155 GDLKKAKV 162>XP_005267848 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 GD+KK+ V Sbjct: 155 GDLKKAKV 162>XP_006711337 Length = 381 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 G +KKSSV Sbjct: 287 GSIKKSSV 294>NP_060413 Length = 711 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDMKKSSV 8 GD+KK+ V Sbjct: 155 GDLKKAKV 162>NP_001269973 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_065076 Length = 1873 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_689976 Length = 836 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GDMKKSSVT 9 GD KSS++ Sbjct: 102 GDASKSSIS 110>NP_055062 Length = 1499 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 492 GDIKKAS 498>NP_055805 Length = 2036 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_001269972 Length = 2049 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>NP_919277 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006723662 Length = 1920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005260825 Length = 1923 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006723661 Length = 1970 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720343 Length = 751 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD++KSS Sbjct: 18 GDVRKSS 24>XP_006720167 Length = 1607 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720166 Length = 2083 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005267550 Length = 2084 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005267549 Length = 2130 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_005267548 Length = 2131 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720165 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720164 Length = 2542 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720163 Length = 2543 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720162 Length = 2589 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006720161 Length = 2590 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KKS+ Sbjct: 8 GDVKKST 14>XP_006714485 Length = 1585 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 537 GDIKKAS 543>XP_005263418 Length = 1654 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 647 GDIKKAS 653>XP_005263417 Length = 1660 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_006714484 Length = 1685 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_005263416 Length = 1693 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 653 GDIKKAS 659>XP_006714483 Length = 1695 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 647 GDIKKAS 653>XP_005263415 Length = 1701 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDMKKSS 7 GD+KK+S Sbjct: 653 GDIKKAS 659Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.295 0.111 0.272 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 413,961 Number of extensions: 433 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |