Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_733751 20 509 XP_006716142 20 509 XP_005250088 20 509 XP_006716141 20 509 XP_005250085 20 509 XP_006716140 20 509 XP_005250084 20 509 XP_005250083 20 509 XP_005250082 20 509 NP_872293 18 1482 XP_005251817 18 1482 XP_006717052 18 1482 NP_001035879 18 1935 XP_006719908 18 1935 XP_006719907 18 1935 NP_002329 17 4312 XP_006713701 17 4312 XP_005247511 17 4312 XP_005255685 16 5631 XP_006721025 16 5631 XP_006721024 16 5631 XP_006721023 16 5631 XP_006721022 16 5631 NP_115672 16 5631 NP_054706 16 7355 NP_003364 16 7355 NP_001278298 16 7355 NP_001278297 16 7355 NP_001004334 16 7355 NP_056023 16 7355 NP_001190985 16 7355 NP_001077094 16 7355 NP_002646 16 7355 NP_001108106 16 7355 NP_060547 16 7355 XP_005258153 16 7355 XP_005258152 16 7355 XP_005258151 16 7355 XP_005258150 16 7355 XP_005258149 16 7355 XP_005270200 16 7355 XP_005270199 16 7355 XP_005251317 16 7355 XP_006716105 16 7355 NP_001159607 16 7355 NP_000490 15 9605 NP_000752 15 9605 NP_001156372 15 9605 NP_001273330 15 9605 NP_001078823 15 9605 NP_004938 15 9605 NP_055520 15 9605 NP_078933 15 9605 NP_954983 15 9605 XP_006724755 15 9605 XP_006724754 15 9605 XP_005262247 15 9605 XP_005254242 15 9605 XP_006719870 15 9605 XP_006716252 15 9605 XP_006716251 15 9605 XP_006713073 15 9605 XP_005264975 15 9605 XP_006713072 15 9605 XP_006713071 15 9605 XP_005264974 15 9605 XP_005264973 15 9605 XP_005264972 15 9605 XP_005264971 15 9605 NP_660359 15 9605>NP_733751 Length = 4911 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 148 GDLKQFRIT 156>XP_006716142 Length = 4927 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>XP_005250088 Length = 4928 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>XP_006716141 Length = 4959 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>XP_005250085 Length = 4979 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>XP_006716140 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>XP_005250084 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>XP_005250083 Length = 4982 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 148 GDLKQFRIT 156>XP_005250082 Length = 4983 Score = 19.6 bits (39), Expect = 509 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDLKQ RIT Sbjct: 149 GDLKQFRIT 157>NP_872293 Length = 652 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDL QVR+T Sbjct: 33 GDLDQVRMT 41>XP_005251817 Length = 569 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDL QVR+T Sbjct: 33 GDLDQVRMT 41>XP_006717052 Length = 616 Score = 18.1 bits (35), Expect = 1482 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GDL QVR+T Sbjct: 33 GDLDQVRMT 41>NP_001035879 Length = 523 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GDLKQVRI 8 G+LKQVRI Sbjct: 5 GNLKQVRI 12>XP_006719908 Length = 427 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GDLKQVRI 8 G+LKQVRI Sbjct: 5 GNLKQVRI 12>XP_006719907 Length = 523 Score = 17.7 bits (34), Expect = 1935 Identities = 7/8 (87%), Positives = 8/8 (100%) Query: 1 GDLKQVRI 8 G+LKQVRI Sbjct: 5 GNLKQVRI 12>NP_002329 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 D+KQV++T Sbjct: 207 DVKQVKVT 214>XP_006713701 Length = 338 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 D+KQV++T Sbjct: 207 DVKQVKVT 214>XP_005247511 Length = 361 Score = 16.5 bits (31), Expect = 4312 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 D+KQV++T Sbjct: 207 DVKQVKVT 214>XP_005255685 Length = 716 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+K VR+ Sbjct: 704 GDIKDVRL 711>XP_006721025 Length = 765 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+K VR+ Sbjct: 753 GDIKDVRL 760>XP_006721024 Length = 766 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+K VR+ Sbjct: 754 GDIKDVRL 761>XP_006721023 Length = 813 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+K VR+ Sbjct: 801 GDIKDVRL 808>XP_006721022 Length = 814 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+K VR+ Sbjct: 802 GDIKDVRL 809>NP_115672 Length = 715 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+K VR+ Sbjct: 703 GDIKDVRL 710>NP_054706 Length = 1134 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 DL+Q+R+T Sbjct: 848 DLEQLRLT 855>NP_003364 Length = 1066 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 DL+Q+R+T Sbjct: 848 DLEQLRLT 855>NP_001278298 Length = 150 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GDLKQVRIT 9 GD K+ R+T Sbjct: 102 GDAKRARLT 110>NP_001278297 Length = 193 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GDLKQVRIT 9 GD K+ R+T Sbjct: 145 GDAKRARLT 153>NP_001004334 Length = 2367 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GDLKQVRIT 9 GD +QVR++ Sbjct: 222 GDTQQVRLS 230>NP_056023 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 196 GDVKQVK 202>NP_001190985 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 173 GDVKQVK 179>NP_001077094 Length = 2039 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 173 GDVKQVK 179>NP_002646 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GDLKQVRIT 9 GDL +VR T Sbjct: 7 GDLSEVRDT 15>NP_001108106 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GDLKQVRIT 9 GDL +VR T Sbjct: 7 GDLSEVRDT 15>NP_060547 Length = 759 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 G+LK VRI Sbjct: 359 GELKYVRI 366>XP_005258153 Length = 2037 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 171 GDVKQVK 177>XP_005258152 Length = 2060 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 194 GDVKQVK 200>XP_005258151 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 196 GDVKQVK 202>XP_005258150 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 196 GDVKQVK 202>XP_005258149 Length = 2062 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD+KQV+ Sbjct: 196 GDVKQVK 202>XP_005270200 Length = 1067 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 DL+Q+R+T Sbjct: 849 DLEQLRLT 856>XP_005270199 Length = 1135 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 DLKQVRIT 9 DL+Q+R+T Sbjct: 849 DLEQLRLT 856>XP_005251317 Length = 500 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GDLKQVRIT 9 GDL +VR T Sbjct: 7 GDLSEVRDT 15>XP_006716105 Length = 734 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 G+LK VRI Sbjct: 359 GELKYVRI 366>NP_001159607 Length = 618 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 G+LK VRI Sbjct: 218 GELKYVRI 225>NP_000490 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+ Q+RI Sbjct: 71 GDVLQIRI 78>NP_000752 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+ Q+RI Sbjct: 73 GDVLQIRI 80>NP_001156372 Length = 202 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLKQVRI 8 D+K+VRI Sbjct: 120 DIKEVRI 126>NP_001273330 Length = 211 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLKQVRI 8 D+K+VRI Sbjct: 120 DIKEVRI 126>NP_001078823 Length = 900 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQVRIT 9 KQVRIT Sbjct: 314 KQVRIT 319>NP_004938 Length = 2030 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>NP_055520 Length = 1966 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 366 GDIEQIR 372>NP_078933 Length = 937 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQVRIT 9 KQVRIT Sbjct: 314 KQVRIT 319>NP_954983 Length = 708 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLKQVRI 8 DLKQ+R+ Sbjct: 554 DLKQMRL 560>XP_006724755 Length = 532 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQVRIT 9 KQVRIT Sbjct: 314 KQVRIT 319>XP_006724754 Length = 815 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQVRIT 9 KQVRIT Sbjct: 192 KQVRIT 197>XP_005262247 Length = 845 Score = 15.4 bits (28), Expect = 9605 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 4 KQVRIT 9 KQVRIT Sbjct: 222 KQVRIT 227>XP_005254242 Length = 512 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GDLKQVRI 8 GD+ Q+RI Sbjct: 71 GDVLQIRI 78>XP_006719870 Length = 683 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLKQVRI 8 DLKQ+R+ Sbjct: 529 DLKQMRL 535>XP_006716252 Length = 1937 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 366 GDIEQIR 372>XP_006716251 Length = 1975 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 366 GDIEQIR 372>XP_006713073 Length = 1869 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_005264975 Length = 2022 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_006713072 Length = 2042 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_006713071 Length = 2050 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_005264974 Length = 2057 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_005264973 Length = 2062 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_005264972 Length = 2065 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>XP_005264971 Length = 2071 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 7/7 (100%) Query: 1 GDLKQVR 7 GD++Q+R Sbjct: 386 GDMEQIR 392>NP_660359 Length = 229 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 2 DLKQVRI 8 D+K+VRI Sbjct: 120 DIKEVRI 126Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.321 0.143 0.380 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 433,500 Number of extensions: 795 Number of successful extensions: 70 Number of sequences better than 10000.0: 70 Number of HSP's gapped: 70 Number of HSP's successfully gapped: 70 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.8 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |