Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value XP_006726157 21 175 XP_005275612 21 175 XP_005275610 21 175 XP_006726064 21 175 XP_005275460 21 175 XP_006715157 21 175 XP_005249149 21 175 NP_002254 21 175 NP_036462 20 390 NP_001243397 20 390 XP_005269721 20 390 NP_064578 18 1482 XP_006718702 18 1482 XP_006718701 18 1482 XP_006718700 18 1482 XP_005274169 18 1482 XP_005274166 18 1482 XP_005274165 18 1482 XP_005274163 18 1482 NP_001092880 17 3301 NP_001092881 17 3301 NP_055525 17 3301 NP_001171656 17 3301 XP_006710531 17 3301 XP_006710530 17 3301 XP_006710529 17 3301 XP_006710528 17 3301 NP_001032 16 5631 NP_056171 16 7355 NP_874365 16 7355 NP_001137357 16 7355 NP_001137358 16 7355 NP_001231919 16 7355 NP_002471 16 7355 NP_078966 16 7355 NP_001138478 16 7355 NP_001271236 16 7355 NP_001271235 16 7355 NP_071918 16 7355 XP_006723004 16 7355 XP_005254649 16 7355 XP_005254648 16 7355 XP_005268949 16 7355 XP_005268946 16 7355 XP_005268944 16 7355 XP_005268945 16 7355 XP_005268943 16 7355 XP_005268942 16 7355 NP_001138479 16 7355 NP_689504 16 7355 NP_000375 15 9605 NP_001193727 15 9605 NP_001193725 15 9605 NP_001193726 15 9605 NP_065128 15 9605 NP_001193728 15 9605 NP_872271 15 9605 NP_872270 15 9605 NP_002645 15 9605 NP_001135943 15 9605 NP_055215 15 9605 NP_001456 15 9605 NP_955367 15 9605 NP_789792 15 9605 NP_005444 15 9605 NP_001138810 15 9605 NP_775871 15 9605 NP_001230022 15 9605 XP_005254502 15 9605 XP_005254500 15 9605 XP_006720633 15 9605 XP_006718281 15 9605 XP_006714529 15 9605 XP_006714528 15 9605 XP_006714527 15 9605 XP_005263206 15 9605 XP_005263205 15 9605>XP_006726157 Length = 414 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>XP_005275612 Length = 633 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 16 GATTKITTS 24>XP_005275610 Length = 674 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>XP_006726064 Length = 414 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>XP_005275460 Length = 674 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>XP_006715157 Length = 414 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>XP_005249149 Length = 674 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>NP_002254 Length = 673 Score = 21.2 bits (43), Expect = 175 Identities = 9/9 (100%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITTS Sbjct: 57 GATTKITTS 65>NP_036462 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITT+ Sbjct: 408 GATTKITTT 416>NP_001243397 Length = 1890 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITT+ Sbjct: 408 GATTKITTT 416>XP_005269721 Length = 2073 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 9/9 (100%) Query: 1 GATTKITTS 9 GATTKITT+ Sbjct: 408 GATTKITTT 416>NP_064578 Length = 1322 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 562 GTTTKITT 569>XP_006718702 Length = 1151 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 512 GTTTKITT 519>XP_006718701 Length = 1309 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 563 GTTTKITT 570>XP_006718700 Length = 1216 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 577 GTTTKITT 584>XP_005274169 Length = 1272 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 526 GTTTKITT 533>XP_005274166 Length = 1323 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 577 GTTTKITT 584>XP_005274165 Length = 1323 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 563 GTTTKITT 570>XP_005274163 Length = 1337 Score = 18.1 bits (35), Expect = 1482 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 1 GATTKITT 8 G TTKITT Sbjct: 577 GTTTKITT 584>NP_001092880 Length = 1395 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+TK+ TS Sbjct: 61 GASTKVETS 69>NP_001092881 Length = 1395 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+TK+ TS Sbjct: 61 GASTKVETS 69>NP_055525 Length = 1395 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+TK+ TS Sbjct: 61 GASTKVETS 69>NP_001171656 Length = 1395 Score = 16.9 bits (32), Expect = 3301 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+TK+ TS Sbjct: 61 GASTKVETS 69>XP_006710531 Length = 569 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GATTKITT 8 GATTK+T+ Sbjct: 2 GATTKMTS 9>XP_006710530 Length = 569 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GATTKITT 8 GATTK+T+ Sbjct: 2 GATTKMTS 9>XP_006710529 Length = 569 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GATTKITT 8 GATTK+T+ Sbjct: 2 GATTKMTS 9>XP_006710528 Length = 569 Score = 16.9 bits (32), Expect = 3301 Identities = 6/8 (75%), Positives = 8/8 (100%) Query: 1 GATTKITT 8 GATTK+T+ Sbjct: 2 GATTKMTS 9>NP_001032 Length = 1827 Score = 16.2 bits (30), Expect = 5631 Identities = 5/8 (62%), Positives = 8/8 (100%) Query: 2 ATTKITTS 9 ATT++TT+ Sbjct: 49 ATTRVTTN 56>NP_056171 Length = 1630 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATTKITTS 9 ATT ITT+ Sbjct: 970 ATTSITTA 977>NP_874365 Length = 1655 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATTKITTS 9 ATT ITT+ Sbjct: 970 ATTSITTA 977>NP_001137357 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>NP_001137358 Length = 943 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 506 TTKITT 511>NP_001231919 Length = 995 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>NP_002471 Length = 1030 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>NP_078966 Length = 14507 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GATTKIT 7 GATTK++ Sbjct: 8735 GATTKVS 8741>NP_001138478 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ATTKITT 8 A+TKITT Sbjct: 119 ASTKITT 125>NP_001271236 Length = 1111 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+ +ITTS Sbjct: 401 GASLQITTS 409>NP_001271235 Length = 1068 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+ +ITTS Sbjct: 358 GASLQITTS 366>NP_071918 Length = 1883 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+ +ITTS Sbjct: 1173 GASLQITTS 1181>XP_006723004 Length = 6443 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GATTKIT 7 GATTK++ Sbjct: 649 GATTKVS 655>XP_005254649 Length = 1819 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+ +ITTS Sbjct: 1196 GASLQITTS 1204>XP_005254648 Length = 1906 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+ +ITTS Sbjct: 1196 GASLQITTS 1204>XP_005268949 Length = 987 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>XP_005268946 Length = 999 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>XP_005268944 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>XP_005268945 Length = 1005 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>XP_005268943 Length = 1034 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 581 TTKITT 586>XP_005268942 Length = 1046 Score = 15.8 bits (29), Expect = 7355 Identities = 6/6 (100%), Positives = 6/6 (100%) Query: 3 TTKITT 8 TTKITT Sbjct: 593 TTKITT 598>NP_001138479 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ATTKITT 8 A+TKITT Sbjct: 119 ASTKITT 125>NP_689504 Length = 377 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 ATTKITT 8 A+TKITT Sbjct: 119 ASTKITT 125>NP_000375 Length = 4563 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GATTKITTS 9 GA+ K+TT+ Sbjct: 1679 GASMKLTTN 1687>NP_001193727 Length = 516 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 122 GATLKIT 128>NP_001193725 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 211 GATLKIT 217>NP_001193726 Length = 457 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 63 GATLKIT 69>NP_065128 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GATTKITTS 9 G+TT TTS Sbjct: 414 GSTTSKTTS 422>NP_001193728 Length = 536 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 142 GATLKIT 148>NP_872271 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 137 GATLKIT 143>NP_872270 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 137 GATLKIT 143>NP_002645 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 137 GATLKIT 143>NP_001135943 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GATTKITTS 9 G+TT TTS Sbjct: 414 GSTTSKTTS 422>NP_055215 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 ATTKITTS 9 +TT +TTS Sbjct: 251 STTSVTTS 258>NP_001456 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 +TK+TTS Sbjct: 756 STKVTTS 762>NP_955367 Length = 783 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 +TK+TTS Sbjct: 710 STKVTTS 716>NP_789792 Length = 1093 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 TT++TTS Sbjct: 306 TTRLTTS 312>NP_005444 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATTKITTS 9 ATT ITT+ Sbjct: 154 ATTTITTA 161>NP_001138810 Length = 634 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 ATTKITTS 9 ATT ITT+ Sbjct: 154 ATTTITTA 161>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTKITTS 9 TTK TTS Sbjct: 6987 TTKTTTS 6993Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 TTKITTS 9 TTK TTS Sbjct: 7105 TTKTTTS 7111>NP_001230022 Length = 839 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 +TK+TTS Sbjct: 766 STKVTTS 772>XP_005254502 Length = 531 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 137 GATLKIT 143>XP_005254500 Length = 591 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 197 GATLKIT 203>XP_006720633 Length = 605 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GATTKIT 7 GAT KIT Sbjct: 211 GATLKIT 217>XP_006718281 Length = 983 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 TT++TTS Sbjct: 196 TTRLTTS 202>XP_006714529 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 +TK+TTS Sbjct: 756 STKVTTS 762>XP_006714528 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 +TK+TTS Sbjct: 756 STKVTTS 762>XP_006714527 Length = 829 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 TTKITTS 9 +TK+TTS Sbjct: 756 STKVTTS 762>XP_005263206 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GATTKITTS 9 G+TT TTS Sbjct: 414 GSTTSKTTS 422>XP_005263205 Length = 462 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GATTKITTS 9 G+TT TTS Sbjct: 414 GSTTSKTTS 422Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.293 0.104 0.253 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 291,792 Number of extensions: 824 Number of successful extensions: 78 Number of sequences better than 10000.0: 77 Number of HSP's gapped: 78 Number of HSP's successfully gapped: 78 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.1 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |