Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 20 390 NP_001277143 20 390 NP_001077383 20 390 NP_001320 20 390 NP_073713 20 390 XP_005269629 20 390 XP_005269628 20 390 XP_005269627 20 390 XP_005269626 20 390 XP_006717706 20 390 XP_005269625 20 390 XP_005269624 20 390 XP_006717705 20 390 XP_005269622 20 390 XP_005269621 20 390 XP_006717704 20 390 XP_005269619 20 390 XP_005269618 20 390 NP_001319 19 869 NP_001012632 19 869 XP_005272320 19 869 XP_005272319 19 869 XP_005272318 19 869 NP_001269557 17 3301 NP_001269560 17 3301 NP_000038 17 3301 XP_005274578 17 3301 XP_005274576 17 3301 XP_005274575 17 3301 NP_005597 17 4312 NP_001008530 17 4312 XP_005267920 17 4312 XP_005267919 17 4312 NP_005236 16 5631 NP_071417 16 5631 XP_006714202 16 5631 XP_005262892 16 5631 XP_005262891 16 5631 NP_878314 16 7355 NP_001244068 16 7355 NP_000076 16 7355 NP_001180235 16 7355 NP_001159417 16 7355 NP_563615 16 7355 NP_002020 16 7355 NP_004061 16 7355 XP_005245790 16 7355 XP_006710134 16 7355 XP_006710132 16 7355 NP_001036169 16 7355 NP_001161846 15 9605 NP_001161849 15 9605 NP_001161848 15 9605 NP_054747 15 9605 NP_055736 15 9605 NP_055624 15 9605 NP_001008701 15 9605 NP_872394 15 9605 NP_001136336 15 9605 NP_001161847 15 9605 XP_005259876 15 9605 XP_006722752 15 9605 XP_005259875 15 9605 XP_006722751 15 9605 XP_006721417 15 9605 XP_006721416 15 9605 XP_006715527 15 9605 XP_006715351 15 9605 XP_006715350 15 9605 XP_006715349 15 9605 XP_005249561 15 9605 XP_006712517 15 9605>NP_001277144 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>NP_001277143 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>NP_001077383 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>NP_001320 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>NP_073713 Length = 985 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 618 GAMMYHTIT 626>XP_005269629 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269628 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269627 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269626 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_006717706 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269625 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269624 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_006717705 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269622 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269621 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_006717704 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269619 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>XP_005269618 Length = 445 Score = 20.0 bits (40), Expect = 390 Identities = 8/9 (88%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAMM HTIT Sbjct: 78 GAMMYHTIT 86>NP_001319 Length = 440 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GA+M HTIT Sbjct: 72 GALMYHTIT 80>NP_001012632 Length = 429 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GA+M HTIT Sbjct: 61 GALMYHTIT 69>XP_005272320 Length = 430 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GA+M HTIT Sbjct: 61 GALMYHTIT 69>XP_005272319 Length = 430 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GA+M HTIT Sbjct: 61 GALMYHTIT 69>XP_005272318 Length = 441 Score = 18.9 bits (37), Expect = 869 Identities = 7/9 (77%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GA+M HTIT Sbjct: 72 GALMYHTIT 80>NP_001269557 Length = 614 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 M NHTIT Sbjct: 281 MRNHTIT 287>NP_001269560 Length = 544 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 M NHTIT Sbjct: 211 MRNHTIT 217>NP_000038 Length = 589 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 M NHTIT Sbjct: 256 MRNHTIT 262>XP_005274578 Length = 535 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 M NHTIT Sbjct: 202 MRNHTIT 208>XP_005274576 Length = 589 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 M NHTIT Sbjct: 256 MRNHTIT 262>XP_005274575 Length = 598 Score = 16.9 bits (32), Expect = 3301 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 M NHTIT Sbjct: 265 MRNHTIT 271>NP_005597 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GAMMNH 6 G+MMNH Sbjct: 192 GSMMNH 197>NP_001008530 Length = 433 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GAMMNH 6 G+MMNH Sbjct: 192 GSMMNH 197>XP_005267920 Length = 372 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GAMMNH 6 G+MMNH Sbjct: 192 GSMMNH 197>XP_005267919 Length = 376 Score = 16.5 bits (31), Expect = 4312 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GAMMNH 6 G+MMNH Sbjct: 192 GSMMNH 197>NP_005236 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MMNHTI 8 M+NHTI Sbjct: 3638 MLNHTI 3643>NP_071417 Length = 398 Score = 16.2 bits (30), Expect = 5631 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 1 GAMMNHT 7 GA+ NHT Sbjct: 326 GALKNHT 332>XP_006714202 Length = 4588 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MMNHTI 8 M+NHTI Sbjct: 3638 MLNHTI 3643>XP_005262892 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MMNHTI 8 M+NHTI Sbjct: 3638 MLNHTI 3643>XP_005262891 Length = 4600 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 MMNHTI 8 M+NHTI Sbjct: 3638 MLNHTI 3643>NP_878314 Length = 361 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAMMNHTI 8 GAM+ H+I Sbjct: 223 GAMVRHSI 230>NP_001244068 Length = 644 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 508 MNHSIT 513>NP_000076 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 551 MNHSIT 556>NP_001180235 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M HT+T Sbjct: 52 GFRMTHTVT 60>NP_001159417 Length = 517 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 382 MNHSIT 387>NP_563615 Length = 775 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 6/8 (75%) Query: 1 GAMMNHTI 8 G MNH+I Sbjct: 151 GLQMNHSI 158>NP_002020 Length = 350 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M HT+T Sbjct: 52 GFRMTHTVT 60>NP_004061 Length = 687 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 551 MNHSIT 556>XP_005245790 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 551 MNHSIT 556>XP_006710134 Length = 326 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 198 MNHSIT 203>XP_006710132 Length = 518 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 382 MNHSIT 387>NP_001036169 Length = 686 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 MNHTIT 9 MNH+IT Sbjct: 551 MNHSIT 556>NP_001161846 Length = 1063 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 527 NHTIT 531>NP_001161849 Length = 1011 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 536 NHTIT 540>NP_001161848 Length = 1027 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 491 NHTIT 495>NP_054747 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 + NHT+T Sbjct: 192 LFNHTLT 198>NP_055736 Length = 1469 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M NH +T Sbjct: 1174 GTMGNHLLT 1182>NP_055624 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 536 NHTIT 540>NP_001008701 Length = 1474 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M NH +T Sbjct: 1179 GTMGNHLLT 1187>NP_872394 Length = 1758 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 1408 NHTIT 1412>NP_001136336 Length = 2521 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAM+ +T+T Sbjct: 517 GAMLLYTLT 525>NP_001161847 Length = 1072 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 536 NHTIT 540>XP_005259876 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M NH +T Sbjct: 1179 GTMGNHLLT 1187>XP_006722752 Length = 1462 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M NH +T Sbjct: 1143 GTMGNHLLT 1151>XP_005259875 Length = 1493 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M NH +T Sbjct: 1174 GTMGNHLLT 1182>XP_006722751 Length = 1498 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 6/9 (66%) Query: 1 GAMMNHTIT 9 G M NH +T Sbjct: 1179 GTMGNHLLT 1187>XP_006721417 Length = 2497 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAM+ +T+T Sbjct: 517 GAMLLYTLT 525>XP_006721416 Length = 2504 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAMMNHTIT 9 GAM+ +T+T Sbjct: 500 GAMLLYTLT 508>XP_006715527 Length = 280 Score = 15.4 bits (28), Expect = 9605 Identities = 4/7 (57%), Positives = 6/7 (85%) Query: 3 MMNHTIT 9 + NHT+T Sbjct: 192 LFNHTLT 198>XP_006715351 Length = 920 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 384 NHTIT 388>XP_006715350 Length = 1040 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 598 NHTIT 602>XP_006715349 Length = 1101 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 565 NHTIT 569>XP_005249561 Length = 1134 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 598 NHTIT 602>XP_006712517 Length = 1757 Score = 15.4 bits (28), Expect = 9605 Identities = 5/5 (100%), Positives = 5/5 (100%) Query: 5 NHTIT 9 NHTIT Sbjct: 1408 NHTIT 1412Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.323 0.123 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 445,461 Number of extensions: 441 Number of successful extensions: 72 Number of sequences better than 10000.0: 72 Number of HSP's gapped: 72 Number of HSP's successfully gapped: 72 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (16.1 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |