Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_077024 17 4312 NP_065715 17 4312 NP_060531 16 5631 NP_631896 16 5631 NP_001093146 16 5631 NP_005409 16 5631 NP_998783 16 5631 XP_005253141 16 5631 XP_005253140 16 5631 XP_005253138 16 5631 XP_005253137 16 5631 XP_005253136 16 5631 XP_006718348 16 5631 XP_006718347 16 5631 XP_005253134 16 5631 NP_001164104 16 5631 NP_001188309 16 7355 NP_001338 16 7355 NP_001265585 16 7355 NP_004166 16 7355 NP_037431 16 7355 NP_075387 16 7355 NP_001257821 16 7355 NP_001013757 16 7355 XP_006726548 16 7355 XP_006726547 16 7355 XP_006726546 16 7355 XP_006726545 16 7355 XP_006726544 16 7355 XP_006726543 16 7355 XP_006726542 16 7355 XP_006726541 16 7355 XP_006726540 16 7355 XP_006726539 16 7355 XP_006726538 16 7355 XP_006726537 16 7355 XP_005266257 16 7355 XP_005274018 16 7355 XP_005274017 16 7355 XP_006716926 16 7355 XP_006716925 16 7355 XP_006716924 16 7355 XP_006716923 16 7355 XP_006716922 16 7355 XP_006716921 16 7355 XP_006716920 16 7355 XP_006716919 16 7355 XP_006716918 16 7355 XP_006716917 16 7355 XP_006716916 16 7355 XP_005248564 16 7355 NP_542418 16 7355 NP_005900 16 7355 NP_001004480 16 7355 NP_078961 15 9605 NP_775871 15 9605 XP_005276050 15 9605 NP_002144 15 9605>NP_077024 Length = 678 Score = 16.5 bits (31), Expect = 4312 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAGSTKAA 8 GAG T+AA Sbjct: 27 GAGKTRAA 34>NP_065715 Length = 292 Score = 16.5 bits (31), Expect = 4312 Identities = 7/8 (87%), Positives = 7/8 (87%) Query: 2 AGSTKAAV 9 AGS KAAV Sbjct: 178 AGSAKAAV 185>NP_060531 Length = 546 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 G G+TK AV Sbjct: 31 GGGATKPAV 39>NP_631896 Length = 717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>NP_001093146 Length = 462 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 G GSTK A+ Sbjct: 347 GLGSTKFAI 355>NP_005409 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>NP_998783 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_005253141 Length = 717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_005253140 Length = 717 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_005253138 Length = 850 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 44 GAGGTKA 50>XP_005253137 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_005253136 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_006718348 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_006718347 Length = 1137 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 14 GAGGTKA 20>XP_005253134 Length = 1167 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 44 GAGGTKA 50>NP_001164104 Length = 622 Score = 16.2 bits (30), Expect = 5631 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 G GSTK A+ Sbjct: 507 GLGSTKFAI 515>NP_001188309 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>NP_001338 Length = 942 Score = 15.8 bits (29), Expect = 7355 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGSTKAAV 9 AG+TKA V Sbjct: 522 AGATKATV 529>NP_001265585 Length = 126 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG KAA+ Sbjct: 94 GAGRGKAAI 102>NP_004166 Length = 126 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG KAA+ Sbjct: 94 GAGRGKAAI 102>NP_037431 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 116 GAGDAEAAV 124>NP_075387 Length = 476 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 7 GAGGLRAAV 15>NP_001257821 Length = 127 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AGSTKAA 8 AG+TKAA Sbjct: 38 AGATKAA 44>NP_001013757 Length = 432 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 2 AGSTKAA 8 AGSTK+A Sbjct: 121 AGSTKSA 127>XP_006726548 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006726547 Length = 966 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 568 GAGQLRAAV 576>XP_006726546 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006726545 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006726544 Length = 1165 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 529 GAGQLRAAV 537>XP_006726543 Length = 1205 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 569 GAGQLRAAV 577>XP_006726542 Length = 1263 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006726541 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 628 GAGQLRAAV 636>XP_006726540 Length = 1287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 661 GAGQLRAAV 669>XP_006726539 Length = 1288 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006726538 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 661 GAGQLRAAV 669>XP_006726537 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_005266257 Length = 287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 7 GAGGLRAAV 15>XP_005274018 Length = 223 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 116 GAGDAEAAV 124>XP_005274017 Length = 358 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 116 GAGDAEAAV 124>XP_006716926 Length = 887 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006716925 Length = 932 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006716924 Length = 1010 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006716923 Length = 1070 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006716922 Length = 1157 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_006716921 Length = 1164 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 528 GAGQLRAAV 536>XP_006716920 Length = 1204 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 568 GAGQLRAAV 576>XP_006716919 Length = 1264 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 628 GAGQLRAAV 636>XP_006716918 Length = 1287 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 661 GAGQLRAAV 669>XP_006716917 Length = 1297 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 661 GAGQLRAAV 669>XP_006716916 Length = 1298 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 662 GAGQLRAAV 670>XP_005248564 Length = 2342 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 G G+T AAV Sbjct: 674 GTGATTAAV 682>NP_542418 Length = 443 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 GAG +AAV Sbjct: 7 GAGGLRAAV 15>NP_005900 Length = 2468 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAGSTKAAV 9 G G+T AAV Sbjct: 800 GTGATTAAV 808>NP_001004480 Length = 330 Score = 15.8 bits (29), Expect = 7355 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAGSTKA 7 GAG TKA Sbjct: 249 GAGRTKA 255>NP_078961 Length = 723 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AGSTKAAV 9 AGS KAA+ Sbjct: 8 AGSVKAAL 15>NP_775871 Length = 8384 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 1 GAGSTKA 7 G+GST+A Sbjct: 7517 GSGSTRA 7523>XP_005276050 Length = 234 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAGSTKAA 8 GAGST+ + Sbjct: 178 GAGSTRGS 185>NP_002144 Length = 387 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 GSTKAAV 9 GS+KAAV Sbjct: 233 GSSKAAV 239Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.297 0.111 0.279 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 530,298 Number of extensions: 642 Number of successful extensions: 58 Number of sequences better than 10000.0: 58 Number of HSP's gapped: 58 Number of HSP's successfully gapped: 58 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 17 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.2 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |