Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001188358 18 1935 NP_036427 18 1935 NP_001186210 18 1935 XP_006724246 18 1935 XP_006724245 18 1935 XP_006724244 18 1935 XP_006724243 18 1935 XP_005261477 18 1935 XP_005261476 18 1935 XP_005261474 18 1935 XP_006724242 18 1935 XP_005261473 18 1935 XP_005261472 18 1935 NP_000093 17 2528 NP_075378 16 5631 NP_060236 16 5631 NP_001073312 16 5631 NP_073713 16 5631 XP_006710775 16 5631 XP_005263536 16 5631 NP_612395 16 7355 NP_055178 16 7355 NP_001264984 16 7355 NP_056364 16 7355 NP_001001788 16 7355 XP_005267570 16 7355 XP_006720171 16 7355 XP_005267569 16 7355 XP_005267568 16 7355 XP_006720170 16 7355 XP_006720169 16 7355 XP_005266395 16 7355 XP_006714066 16 7355 NP_689935 15 9605 NP_078796 15 9605 NP_056986 15 9605 NP_001269802 15 9605 NP_056467 15 9605 NP_777358 15 9605 NP_004126 15 9605 NP_079076 15 9605 NP_116176 15 9605 NP_665917 15 9605 NP_001139475 15 9605 NP_009217 15 9605 XP_005267366 15 9605 XP_006720083 15 9605 XP_006720082 15 9605 XP_005271506 15 9605 XP_006718849 15 9605 XP_005251019 15 9605 XP_005251017 15 9605 XP_005251016 15 9605 XP_005251014 15 9605 XP_005251013 15 9605 XP_005268428 15 9605 XP_005268427 15 9605 XP_005268426 15 9605 XP_006714818 15 9605 XP_005247896 15 9605 XP_006713857 15 9605 XP_006713813 15 9605 XP_006713812 15 9605 XP_005247840 15 9605 XP_005246909 15 9605 NP_694591 15 9605>NP_001188358 Length = 2170 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1191 AARYPKKI 1198>NP_036427 Length = 2220 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>NP_001186210 Length = 2220 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_006724246 Length = 2103 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_006724245 Length = 2191 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_006724244 Length = 2191 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_006724243 Length = 2196 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_005261477 Length = 2200 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_005261476 Length = 2210 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1196 AARYPKKI 1203>XP_005261474 Length = 2225 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_006724242 Length = 2226 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_005261473 Length = 2250 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>XP_005261472 Length = 2255 Score = 17.7 bits (34), Expect = 1935 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AARYPK + Sbjct: 1241 AARYPKKI 1248>NP_000093 Length = 508 Score = 17.3 bits (33), Expect = 2528 Identities = 6/7 (85%), Positives = 7/7 (100%) Query: 3 ARYPKSL 9 A+YPKSL Sbjct: 25 AKYPKSL 31>NP_075378 Length = 402 Score = 16.2 bits (30), Expect = 5631 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 1 GAARYP 6 G+ARYP Sbjct: 326 GSARYP 331>NP_060236 Length = 1166 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARYPKS 8 GAAR P+S Sbjct: 72 GAARAPRS 79>NP_001073312 Length = 1759 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARYPKS 8 GAAR P+S Sbjct: 72 GAARAPRS 79>NP_073713 Length = 985 Score = 16.2 bits (30), Expect = 5631 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 1 GAARYPK 7 GAAR PK Sbjct: 116 GAARVPK 122>XP_006710775 Length = 1759 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARYPKS 8 GAAR P+S Sbjct: 72 GAARAPRS 79>XP_005263536 Length = 1783 Score = 16.2 bits (30), Expect = 5631 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 1 GAARYPKS 8 GAAR P+S Sbjct: 96 GAARAPRS 103>NP_612395 Length = 494 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 3 ARYPKS 8 ARYP+S Sbjct: 380 ARYPRS 385>NP_055178 Length = 4579 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 +A YP+SL Sbjct: 693 SAEYPRSL 700>NP_001264984 Length = 4432 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 +A YP+SL Sbjct: 546 SAEYPRSL 553>NP_056364 Length = 1163 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 529 GAAQEPESL 537>NP_001001788 Length = 334 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARYPKSL 9 GAARY + L Sbjct: 321 GAARYSEPL 329>XP_005267570 Length = 1219 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 585 GAAQEPESL 593>XP_006720171 Length = 1240 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 606 GAAQEPESL 614>XP_005267569 Length = 1340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 706 GAAQEPESL 714>XP_005267568 Length = 1340 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 706 GAAQEPESL 714>XP_006720170 Length = 1354 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 720 GAAQEPESL 728>XP_006720169 Length = 1361 Score = 15.8 bits (29), Expect = 7355 Identities = 6/9 (66%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+SL Sbjct: 727 GAAQEPESL 735>XP_005266395 Length = 4588 Score = 15.8 bits (29), Expect = 7355 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 +A YP+SL Sbjct: 693 SAEYPRSL 700>XP_006714066 Length = 544 Score = 15.8 bits (29), Expect = 7355 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RYPKSL 9 RYP+SL Sbjct: 10 RYPRSL 15>NP_689935 Length = 416 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AARYPKS 8 A RYP+S Sbjct: 358 ARRYPRS 364>NP_078796 Length = 291 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAARYPKS 8 GAA +P+S Sbjct: 50 GAALFPRS 57>NP_056986 Length = 2799 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 1706 GAAQAPRSM 1714>NP_001269802 Length = 2798 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 1706 GAAQAPRSM 1714>NP_056467 Length = 1247 Score = 15.4 bits (28), Expect = 9605 Identities = 6/8 (75%), Positives = 7/8 (87%) Query: 2 AARYPKSL 9 AAR PKS+ Sbjct: 713 AARAPKSV 720>NP_777358 Length = 380 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AARYPK 7 AARYP+ Sbjct: 240 AARYPQ 245>NP_004126 Length = 393 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 2 AARYPK 7 AARYP+ Sbjct: 240 AARYPQ 245>NP_079076 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RYPKSL 9 RYPK L Sbjct: 255 RYPKEL 260>NP_116176 Length = 797 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RYPKSL 9 +YPKSL Sbjct: 429 QYPKSL 434>NP_665917 Length = 470 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RYPKSL 9 RYPK L Sbjct: 255 RYPKEL 260>NP_001139475 Length = 599 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RYPKSL 9 RYPK L Sbjct: 255 RYPKEL 260>NP_009217 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARYPKSL 9 GA+R P SL Sbjct: 691 GASRPPSSL 699>XP_005267366 Length = 1330 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 GAARYPK 7 G RYPK Sbjct: 678 GELRYPK 684>XP_006720083 Length = 1355 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 GAARYPK 7 G RYPK Sbjct: 651 GELRYPK 657>XP_006720082 Length = 1363 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 GAARYPK 7 G RYPK Sbjct: 678 GELRYPK 684>XP_005271506 Length = 415 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AARYPKS 8 A RYP+S Sbjct: 357 ARRYPRS 363>XP_006718849 Length = 423 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 6/7 (85%) Query: 2 AARYPKS 8 A RYP+S Sbjct: 365 ARRYPRS 371>XP_005251019 Length = 1811 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 716 GAAQAPRSM 724>XP_005251017 Length = 2792 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 1700 GAAQAPRSM 1708>XP_005251016 Length = 2795 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 1700 GAAQAPRSM 1708>XP_005251014 Length = 2800 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 1706 GAAQAPRSM 1714>XP_005251013 Length = 2801 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARYPKSL 9 GAA+ P+S+ Sbjct: 1706 GAAQAPRSM 1714>XP_005268428 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARYPKSL 9 GA+R P SL Sbjct: 691 GASRPPSSL 699>XP_005268427 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARYPKSL 9 GA+R P SL Sbjct: 691 GASRPPSSL 699>XP_005268426 Length = 903 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARYPKSL 9 GA+R P SL Sbjct: 691 GASRPPSSL 699>XP_006714818 Length = 1147 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARYPKSL 9 GA+R P SL Sbjct: 935 GASRPPSSL 943>XP_005247896 Length = 502 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RYPKSL 9 +YPKSL Sbjct: 134 QYPKSL 139>XP_006713857 Length = 560 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 6/6 (100%) Query: 4 RYPKSL 9 +YPKSL Sbjct: 192 QYPKSL 197>XP_006713813 Length = 482 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RYPKSL 9 RYPK L Sbjct: 255 RYPKEL 260>XP_006713812 Length = 539 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RYPKSL 9 RYPK L Sbjct: 149 RYPKEL 154>XP_005247840 Length = 645 Score = 15.4 bits (28), Expect = 9605 Identities = 5/6 (83%), Positives = 5/6 (83%) Query: 4 RYPKSL 9 RYPK L Sbjct: 255 RYPKEL 260>XP_005246909 Length = 225 Score = 15.4 bits (28), Expect = 9605 Identities = 5/8 (62%), Positives = 7/8 (87%) Query: 1 GAARYPKS 8 GAA +P+S Sbjct: 50 GAALFPRS 57>NP_694591 Length = 1382 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 5/7 (71%) Query: 1 GAARYPK 7 G RYPK Sbjct: 678 GELRYPK 684Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.314 0.131 0.382 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 648,477 Number of extensions: 824 Number of successful extensions: 66 Number of sequences better than 10000.0: 66 Number of HSP's gapped: 66 Number of HSP's successfully gapped: 66 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.6 bits) S2: 28 (15.4 bits)
|
CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |