Blast-Search of mutated query peptide against human proteome |
BLASTP 2.2.15 [Oct-15-2006] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= User_input (9 letters) Database: HUMAN_PROTEOME_FASTA 71,491 sequences; 45,948,801 total letters Searching..................................................doneScore E Sequences producing significant alignments: (bits) Value NP_001277144 20 509 NP_001277143 20 509 NP_001319 20 509 NP_001012632 20 509 NP_001077383 20 509 NP_001320 20 509 NP_073713 20 509 XP_005269629 20 509 XP_005269628 20 509 XP_005269627 20 509 XP_005269626 20 509 XP_006717706 20 509 XP_005269625 20 509 XP_005269624 20 509 XP_006717705 20 509 XP_005269622 20 509 XP_005269621 20 509 XP_006717704 20 509 XP_005269619 20 509 XP_005269618 20 509 XP_005272320 20 509 XP_005272319 20 509 XP_005272318 20 509 NP_005794 16 5631 XP_006726135 16 5631 XP_005275560 16 5631 XP_005275559 16 5631 XP_006726034 16 5631 XP_005275393 16 5631 XP_005275392 16 5631 XP_006725735 16 5631 XP_005274967 16 5631 XP_005274966 16 5631 XP_006725528 16 5631 XP_005272817 16 5631 XP_005272816 16 5631 XP_006715010 16 5631 XP_005248838 16 5631 XP_005248837 16 5631 NP_001278017 16 7355 NP_114157 16 7355 NP_001074008 16 7355 XP_006723474 16 7355 XP_005259362 16 7355 XP_006712501 16 7355 NP_004804 15 9605 NP_476515 15 9605 NP_005106 15 9605 NP_059447 15 9605 NP_699192 15 9605 NP_071417 15 9605 XP_005262467 15 9605 XP_005262466 15 9605 XP_005262465 15 9605 XP_006714513 15 9605 NP_001094827 15 9605 NP_001257530 15 9605>NP_001277144 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>NP_001277143 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>NP_001319 Length = 440 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 168 GAARIRGE 175>NP_001012632 Length = 429 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 157 GAARIRGE 164>NP_001077383 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>NP_001320 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>NP_073713 Length = 985 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 714 GAARIRGE 721>XP_005269629 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269628 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269627 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269626 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_006717706 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269625 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269624 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_006717705 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269622 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269621 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_006717704 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269619 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005269618 Length = 445 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 174 GAARIRGE 181>XP_005272320 Length = 430 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 157 GAARIRGE 164>XP_005272319 Length = 430 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 157 GAARIRGE 164>XP_005272318 Length = 441 Score = 19.6 bits (39), Expect = 509 Identities = 8/8 (100%), Positives = 8/8 (100%) Query: 1 GAARIRGE 8 GAARIRGE Sbjct: 168 GAARIRGE 175>NP_005794 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 389 GAAKVTGEV 397>XP_006726135 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 336 GAAKVTGEV 344>XP_005275560 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 341 GAAKVTGEV 349>XP_005275559 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 389 GAAKVTGEV 397>XP_006726034 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 336 GAAKVTGEV 344>XP_005275393 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 341 GAAKVTGEV 349>XP_005275392 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 389 GAAKVTGEV 397>XP_006725735 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 336 GAAKVTGEV 344>XP_005274967 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 341 GAAKVTGEV 349>XP_005274966 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 389 GAAKVTGEV 397>XP_006725528 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 336 GAAKVTGEV 344>XP_005272817 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 341 GAAKVTGEV 349>XP_005272816 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 389 GAAKVTGEV 397>XP_006715010 Length = 374 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 336 GAAKVTGEV 344>XP_005248838 Length = 379 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 341 GAAKVTGEV 349>XP_005248837 Length = 427 Score = 16.2 bits (30), Expect = 5631 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 389 GAAKVTGEV 397>NP_001278017 Length = 2912 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G R+RGE+ Sbjct: 1985 GKKRLRGEL 1993>NP_114157 Length = 2873 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G R+RGE+ Sbjct: 1946 GKKRLRGEL 1954>NP_001074008 Length = 1101 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ARIRGEM 9 AR+RGE+ Sbjct: 454 ARLRGEL 460>XP_006723474 Length = 2737 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G R+RGE+ Sbjct: 1810 GKKRLRGEL 1818>XP_005259362 Length = 2855 Score = 15.8 bits (29), Expect = 7355 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G R+RGE+ Sbjct: 1928 GKKRLRGEL 1936>XP_006712501 Length = 1080 Score = 15.8 bits (29), Expect = 7355 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ARIRGEM 9 AR+RGE+ Sbjct: 454 ARLRGEL 460>NP_004804 Length = 336 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 99 GAAKVWGEV 107>NP_476515 Length = 346 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 8/9 (88%) Query: 1 GAARIRGEM 9 GAA++ GE+ Sbjct: 99 GAAKVWGEV 107>NP_005106 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AARIRGE 8 AARI GE Sbjct: 732 AARIEGE 738>NP_059447 Length = 893 Score = 15.4 bits (28), Expect = 9605 Identities = 6/7 (85%), Positives = 6/7 (85%) Query: 2 AARIRGE 8 AARI GE Sbjct: 732 AARIEGE 738>NP_699192 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G RIRGE+ Sbjct: 72 GFYRIRGEI 80>NP_071417 Length = 398 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G R+RGE+ Sbjct: 299 GPRRLRGEV 307>XP_005262467 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ARIRGEM 9 A+IRGE+ Sbjct: 272 AKIRGEL 278>XP_005262466 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ARIRGEM 9 A+IRGE+ Sbjct: 272 AKIRGEL 278>XP_005262465 Length = 334 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ARIRGEM 9 A+IRGE+ Sbjct: 281 AKIRGEL 287>XP_006714513 Length = 436 Score = 15.4 bits (28), Expect = 9605 Identities = 6/9 (66%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G RIRGE+ Sbjct: 72 GFYRIRGEI 80>NP_001094827 Length = 325 Score = 15.4 bits (28), Expect = 9605 Identities = 5/7 (71%), Positives = 7/7 (100%) Query: 3 ARIRGEM 9 A+IRGE+ Sbjct: 272 AKIRGEL 278>NP_001257530 Length = 206 Score = 15.4 bits (28), Expect = 9605 Identities = 5/9 (55%), Positives = 7/9 (77%) Query: 1 GAARIRGEM 9 G AR+RG + Sbjct: 102 GYARLRGHL 110Database: HUMAN_PROTEOME_FASTA Posted date: May 26, 2014 10:46 AM Number of letters in database: 45,948,801 Number of sequences in database: 71,491 Lambda K H 0.324 0.139 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 71491 Number of Hits to DB: 405,457 Number of extensions: 691 Number of successful extensions: 57 Number of sequences better than 10000.0: 57 Number of HSP's gapped: 57 Number of HSP's successfully gapped: 57 Length of query: 9 Length of database: 45,948,801 Length adjustment: 0 Effective length of query: 9 Effective length of database: 45,948,801 Effective search space: 413539209 Effective search space used: 413539209 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 28 (15.9 bits) S2: 28 (15.4 bits)
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CANCERTOPE | Raghava's Group | IMTECH | CSIR | CRDD | GPSR Package |